BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,041,669	G→T	6.9%	P33H (CCT→CAT) ‡	PP_1812 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,041,669	0	G	T	6.9%	622.0 / 23.8	190	P33H (CCT→CAT) ‡	PP_1812	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (87/89); new base T (7/7); total (94/96)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 197 total aligned reads displayed.

GTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAGGGTTGGTTG  >  NC_002947/2041521‑2041818

gTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAgg                                                                                                                                                      <  1:4098284/150‑1 (MQ=255)

gTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAgg                                                                                                                                                      >  2:2759299/1‑150 (MQ=255)

  gCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGTGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATCTGGCTACAGGCACAAGGCCAGGGc                                                                                                                                                    <  2:215865/150‑1 (MQ=255)

    cAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCt                                                                                                                                                  >  1:3230894/1‑150 (MQ=255)

    cAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCt                                                                                                                                                  >  2:448758/1‑150 (MQ=255)

     aGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCtt                                                                                                                                                 <  1:2942353/150‑1 (MQ=255)

      gTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTtg                                                                                                                                                >  1:4855881/1‑150 (MQ=255)

      gTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTtg                                                                                                                                                >  2:2956391/1‑150 (MQ=255)

         tGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCCTGGCCTTGTGc                                                                                                                                             <  2:1659487/150‑1 (MQ=255)

         ggTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGc                                                                                                                                             <  1:2716346/149‑1 (MQ=255)

            cGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGtt                                                                                                                                          >  2:4405221/1‑150 (MQ=255)

              gggggAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCa                                                                                                                                        <  2:3230894/150‑1 (MQ=255)

              gggggAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCa                                                                                                                                        <  1:2759299/150‑1 (MQ=255)

                gggAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAgg                                                                                                                                      <  2:2308641/150‑1 (MQ=255)

                    ggCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAgggccg                                                                                                                                  <  1:3860778/150‑1 (MQ=255)

                       ttACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAgggccgggc                                                                                                                               >  1:4492721/1‑150 (MQ=255)

                       ttACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAgggccgggc                                                                                                                               >  1:4492019/1‑150 (MQ=255)

                       ttACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAgggccgggc                                                                                                                               >  1:2129875/1‑150 (MQ=255)

                        tACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAgggccgggcc                                                                                                                              >  1:2641224/1‑150 (MQ=255)

                         aCCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCAGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGggccgggccg                                                                                                                             >  1:1690331/1‑150 (MQ=255)

                           cGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGccctgg                                                                                                                                        >  1:4182613/1‑132 (MQ=255)

                            gACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAg                                                                                                                                                       <  1:985801/121‑1 (MQ=255)

                            gACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAg                                                                                                                                                       >  2:985801/1‑121 (MQ=255)

                                gggggAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCgggg                                                                                                                      <  1:1865081/150‑1 (MQ=255)

                                  gggAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCg                                                                                                                    >  1:2092252/1‑150 (MQ=255)

                                       ggCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAAc                                                                                                               >  2:5255963/1‑150 (MQ=255)

                                       ggCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAAc                                                                                                               >  1:4995450/1‑150 (MQ=255)

                                        gCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGGTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACg                                                                                                              >  2:1890345/1‑150 (MQ=255)

                                         cGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTtgt                                                                                                                                               >  2:396154/1‑116 (MQ=255)

                                          ggTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGc                                                                                                            >  2:3738036/1‑150 (MQ=255)

                                           gTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGACACGGcc                                                                                                           >  1:4561490/1‑150 (MQ=255)

                                           gTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGcc                                                                                                           >  2:4851300/1‑150 (MQ=255)

                                                 cgggcgggCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGtt                                                                                                     >  1:3368841/1‑150 (MQ=255)

                                                  gggcgggcCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGttt                                                                                                    <  1:69788/150‑1 (MQ=255)

                                                       ggcCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTgtggg                                                                                               >  2:5131180/1‑150 (MQ=255)

                                                         ccTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCCGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTgtgggtg                                                                                             >  1:1369739/1‑150 (MQ=255)

                                                          cTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTgtgggtgg                                                                                            <  1:1413582/150‑1 (MQ=255)

                                                          cTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTgtgggtgg                                                                                            <  1:428133/150‑1 (MQ=255)

                                                          cTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTgtgggtgg                                                                                            <  1:5366022/150‑1 (MQ=255)

                                                           ttGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGtgggtggg                                                                                           >  1:2271204/1‑150 (MQ=255)

                                                            tGTTCGGCGGGCGTTGTAGGAGATTGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTgggtgggt                                                                                          <  2:2861320/150‑1 (MQ=255)

                                                                  gggggcgTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGtt                                                                                    <  1:3118234/148‑1 (MQ=255)

                                                                  gcgggcgTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGtt                                                                                    >  2:2274703/1‑150 (MQ=255)

                                                                  gcgggcgTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGtt                                                                                    <  2:816390/150‑1 (MQ=255)

                                                                  gcgggcgTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGtt                                                                                    >  1:3048824/1‑150 (MQ=255)

                                                                  gcgggcgTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATGTGGCTACAGGCACAAGGCCAGGGCCTGGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGGGGGTGAAGtt                                                                                    >  2:4252202/1‑150 (MQ=255)

                                                                    gggggTTGTAGGCGTATGGGGGGGCAGTGGTGGGCAGTGGGTATCGGTCAAACGGGGTTTTGGCTACAGGCACACGGCCAGGGGCTTGTGCGTTCAGGTGCGGGCGGAGCGGGGCGGATACGGCCACGGTTTGTGGGTGGGTGAAGTTGa                                                                                  <  1:3639387/150‑1 (MQ=255)

                                                                    gggcgTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGa                                                                                  <  1:4933661/150‑1 (MQ=255)

                                                                            tAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTg                                                                          >  1:1480719/1‑150 (MQ=255)

                                                                              ggAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCt                                                                        <  1:2000359/150‑1 (MQ=255)

                                                                              ggAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCt                                                                        >  2:3412067/1‑150 (MQ=255)

                                                                                agaATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGa                                                                      <  1:4364553/150‑1 (MQ=255)

                                                                                agaATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGa                                                                      <  1:246192/150‑1 (MQ=255)

                                                                                 gtaTGGCCGGGCAGTGGTGGGCAGTTGGTATCGGACAAACGGGGATTTGGCTACAGGCACATGGCCAGGGCCTTGTTCGTTCAGGGCCGGGCCGAGCGGGGCTGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGAc                                                                     <  1:4392066/148‑1 (MQ=255)

                                                                                      gCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGAtt                                                                >  2:2636699/1‑150 (MQ=255)

                                                                                      gCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGAtt                                                                <  1:5379357/150‑1 (MQ=255)

                                                                                       ccGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTc                                                               <  1:1214667/150‑1 (MQ=255)

                                                                                         gggCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCgg                                                             >  2:4739609/1‑150 (MQ=255)

                                                                                         gggCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCgg                                                             >  1:4951460/1‑150 (MQ=255)

                                                                                           gCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGa                                                                                                                  >  2:3184030/1‑95 (MQ=255)

                                                                                           gCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGa                                                                                                                  <  1:3184030/95‑1 (MQ=255)

                                                                                              gtggtgGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAAcc                                                        <  1:3541962/150‑1 (MQ=255)

                                                                                               tggtggGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTgtgg                                                                                                <  2:1240500/109‑1 (MQ=255)

                                                                                               tggtggGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCa                                                       >  1:4437790/1‑150 (MQ=255)

                                                                                                 gtggGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCAtt                                                     >  2:1176813/1‑150 (MQ=255)

                                                                                                   gggCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCg                                                   >  2:4220101/1‑150 (MQ=255)

                                                                                                         tGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTCTTGCTGACCGATTCGGTAACCATTCGCCgggg                                             <  1:4895966/150‑1 (MQ=255)

                                                                                                              aTCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGtt                                        <  2:4587118/150‑1 (MQ=255)

                                                                                                               tCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTg                                       >  2:4136316/1‑150 (MQ=255)

                                                                                                               tCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTg                                       >  2:4136101/1‑150 (MQ=255)

                                                                                                                cGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTgg                                      <  2:1326461/150‑1 (MQ=255)

                                                                                                                 ggACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTggg                                     >  1:524563/1‑150 (MQ=255)

                                                                                                                 ggACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTggg                                     <  1:1238057/150‑1 (MQ=255)

                                                                                                                   aCAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTa                                   >  2:4413614/1‑150 (MQ=255)

                                                                                                                     aaaCGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTAtt                                 <  2:4647286/150‑1 (MQ=255)

                                                                                                                           ggATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCgg                           <  1:4727449/150‑1 (MQ=255)

                                                                                                                               ttGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAg                       <  2:1408444/150‑1 (MQ=255)

                                                                                                                                 ggCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTCGTTGGGTATGGTGCGGCCAGGt                     >  2:2608818/1‑150 (MQ=255)

                                                                                                                                   ctgaacgCACAAGGCCCTGGCCTTGTGCCTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTa                   >  2:613248/7‑150 (MQ=255)

                                                                                                                                   cTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTa                   >  1:683248/1‑150 (MQ=255)

                                                                                                                                    tACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTAc                  >  1:1666833/1‑150 (MQ=255)

                                                                                                                                     aCAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTAcc                 <  2:2804803/150‑1 (MQ=255)

                                                                                                                                         gCACAAGGCCCTGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCAt                                                      <  2:2232270/109‑1 (MQ=255)

                                                                                                                                         gCACAAGGCCCTGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCAt                                                      <  2:2232120/109‑1 (MQ=255)

                                                                                                                                         gCACAAGGCCCTGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCAt                                                      >  1:2232270/1‑109 (MQ=255)

                                                                                                                                         gCACAAGGCCCTGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCt             >  2:516354/1‑150 (MQ=255)

                                                                                                                                         gCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCt             >  1:1043856/1‑150 (MQ=255)

                                                                                                                                          cacaAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTa            <  2:2122512/150‑1 (MQ=255)

                                                                                                                                           acaAGGCCCTGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAg           >  1:1275165/1‑150 (MQ=255)

                                                                                                                                            caAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAgg          >  1:3873764/1‑150 (MQ=255)

                                                                                                                                             aaGGCCCTGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAggg         <  1:516354/150‑1 (MQ=255)

                                                                                                                                             aaGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTaa                                                          <  2:1589414/101‑1 (MQ=255)

                                                                                                                                             aaGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTaa                                                          >  1:1589414/1‑101 (MQ=255)

                                                                                                                                                gCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAGggttg      <  2:2035875/150‑1 (MQ=255)

                                                                                                                                                 ccAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAGggttgg     <  1:1095705/150‑1 (MQ=255)

                                                                                                                                                  cAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAGggttggt    <  2:1771496/150‑1 (MQ=255)

                                                                                                                                                  cAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAGggttggt    >  1:2935977/1‑150 (MQ=255)

                                                                                                                                                   aGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAGggttggtt   <  2:3054459/150‑1 (MQ=255)

                                                                                                                                                    gggCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTgg                                      >  2:5343970/1‑114 (MQ=255)

                                                                                                                                                    gggCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAGGgttggttg  <  2:1480719/150‑1 (MQ=255)

GTGCCAGTTTGTCGGGGGGAGGCTTACCGACTGGGGGAGGGCGGTTTACCGGGCGGGCCTTGTTCGGCGGGCGTTGTAGGAGAATGGCCGGGCAGTGGTGGGCAGTGGGTATCGGACAAACGGGGATTTGGCTACAGGCACAAGGCCAGGGCCTTGTGCGTTCAGGGCCGGGCCGAGCGGGGCGGAAACGGCCACGGTTTGTGGGTGGGTGAAGTTGAGCGTTTTGCTGACCGATTCGGTAACCATTCGCCGGGGTAGTTGGGTATTGTGCGGCCAGGTTACCCGCTAGGGTTGGTTG  >  NC_002947/2041521‑2041818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`