| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,089,800 | C→T | 5.3% | intergenic (+648/+270) | PP_1865 → / ← aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,089,800 | 0 | C | T | 5.3% | 432.1 / 10.0 | 150 | intergenic (+648/+270) | PP_1865/aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase |
| Reads supporting (aligned to +/- strand): ref base C (95/46); new base T (3/5); total (98/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01 | |||||||||||
Only 100 of 155 total aligned reads displayed.
GGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTT > NC_002947/2089654‑2089949 | ggTGACGGGCTTGGATGCCCGTCAAGCGGTGGGCCCCCGGATGGGGCCTGCAGCGGGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCAc < 2:618121/150‑1 (MQ=255)ggTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCAc < 2:3592929/150‑1 (MQ=34) tGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGa < 2:1232915/150‑1 (MQ=34) gggCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCaa > 2:5058583/1‑150 (MQ=34) ggCATGGATGCCCGTCATGCGGTGGGCCCCTGGAGGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGCGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCaaa < 1:4813729/150‑1 (MQ=11) ggCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCaaa < 2:4212037/150‑1 (MQ=34) gCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGCGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAg > 2:3990666/1‑150 (MQ=21) gCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAg > 1:1577983/1‑150 (MQ=34) gCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTATGGTTACTTTGGCCACGACCAAAg > 1:1577841/1‑150 (MQ=21) tggtggCCCGTCACGCGGTGGGCCCCTGTTTGGGGCCGGCCGCGCGGTCCTCCGGGGAGCAAGCCGGGCGTGTGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAGTaa < 1:601052/145‑1 (MQ=11) tGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAGTaa < 2:1339486/150‑1 (MQ=255) tGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTaa < 2:3507558/150‑1 (MQ=34) gATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAAcc > 2:3684928/1‑150 (MQ=34) aTGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGATCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAAccc > 1:4687112/1‑150 (MQ=21) cccGACAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCACGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTGGGTTACTTTGGTCGTGGCCAAAGTAAccaaaa < 1:739271/150‑5 (MQ=11) ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACccgccg > 2:2308106/1‑150 (MQ=34) ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACccgccg > 2:2308085/1‑150 (MQ=34) ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTGTGGCCACGACCAAAGTAACccgccg > 2:1657902/1‑150 (MQ=21) tgcaggCCCCATCCTGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCgg > 1:3149589/5‑150 (MQ=255) gcTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCgg > 1:2117613/1‑150 (MQ=34) gcTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCgg > 2:2491672/1‑150 (MQ=34) cTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGa > 2:2153101/1‑150 (MQ=34) gggCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGaaa < 2:4072091/150‑1 (MQ=34) aggCCCCATCCTGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGaaa > 2:3615707/2‑150 (MQ=255) ggCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAg > 1:3945257/1‑150 (MQ=34) ccccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGagatcg > 1:1566310/1‑145 (MQ=21) cccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTg > 1:2936860/1‑150 (MQ=34) cccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTg > 2:4977356/1‑150 (MQ=34) cctggtgggggCCTGCCGGGCGGTCCTCCGGGTAGCACGCCCGGTGTGTGGGGACCCGGGTGCGTTGGGTTGGGGCCGTATGTTGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACAAATGTAACCCGCCGGAAGGGCGGAAAGGTGa < 1:4083199/143‑1 (MQ=11) cccggtgggggCCTGCAGCGGGGCCCCCCGGGGAGCATGCGCGGTGTGTGGGGACCCCGGTGCGTAGCGTCGGGGCGGGATGTTGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACAAAAGTAACCCGCCGGAAGGGCGGAAAGGTGa < 1:4083179/143‑1 (MQ=11) ccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGa > 1:3410245/1‑150 (MQ=34) atcctGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAAt > 2:194249/5‑150 (MQ=21) gATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAGTaa > 2:5294606/1‑122 (MQ=255) gATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAGTaa < 1:5294606/122‑1 (MQ=255) gggCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGgcgc > 2:5191988/1‑150 (MQ=34) gCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCt > 1:1357342/1‑150 (MQ=34) ggggggTCCTCCGGGTAGCACGCCGGGTGTGGGGGGCCCCGGGCGCGTTGGGTTGGGGCGGGATGTTGGGTGCCGAGGTTTTTGTTTACTTTGGCCACGACAAAATTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGt < 2:3410245/146‑1 (MQ=2) cctccGGGTAGCACGCCGGTTGTGCGGGCACCCCGGAGCGTCGCGTAGGGGCCGGATGTTGGGAGCCGCCGGTTTTGGTTACTTGGGCCACGACAAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGtgaatgaa < 2:5169852/150‑1 (MQ=11) ctccGGGGAGCAAGCCGGGTGTGAGGGGACCCGGGTGGTTTGCGTTGGGGCCGTATGTTGGGAGCCGCCGTTTTTGGTTACTTTGGCCACGACAAATGAAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTgaatgaat < 2:3794250/150‑1 (MQ=11) ctccCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTgaatgaat > 2:2448162/1‑150 (MQ=37) tccCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGaatgaatg > 2:3586843/1‑150 (MQ=37) tccCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGaatgaatg > 1:4578030/1‑150 (MQ=37) ccGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGtg > 2:4929504/1‑149 (MQ=37) ccGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTc > 2:104535/1‑150 (MQ=37) cagggAGCAAGCCCGGAGTGAGGGGACACCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTc > 2:3360384/3‑150 (MQ=37) cGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAGTaa < 2:2949926/97‑1 (MQ=11) cGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAGTaa > 1:2949926/1‑97 (MQ=11) aaGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGAt > 2:3803079/1‑150 (MQ=37) ccGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGa > 1:4658969/1‑150 (MQ=39) ggtgtgtGGGGACCCGGGTGGGTTGGTTTGGGGCGGGATGTTGGGAGCCGCGGTTTTTGGTTACTTTGGCCACGACAAAATTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGaaa < 2:4578030/147‑1 (MQ=14) ggtggggACCCCGGTGGTTTGGGTTGGGGCGTTATTTTGGGAGCCTAGGTTTTTGTTTACTTTGGCCACGACAAATGTAACCCGCCGGAAGGGCGGGAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAgcgc < 2:603574/147‑1 (MQ=11) ngACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAc > 1:2000941/2‑150 (MQ=39) gACCCCGGAGCGTTGCGTTGGGGCCGGTTGATGGGAGCCGACGGTTTTGGTTACTTGGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcc < 2:2166928/150‑1 (MQ=255) cccGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaa > 2:301469/1‑150 (MQ=39) cccGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaa > 1:1101137/1‑150 (MQ=39) cgtagcgtagGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagccca < 1:4977356/150‑1 (MQ=255) ggggCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaa > 1:5037398/1‑150 (MQ=255) ggcggtatgttgGGAGCCGAGGTTTTTGTTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaa < 1:5441834/144‑1 (MQ=14) gCCGGTTTATGGTAGCCGTCGGTTTTGGTTACTTTGGCCACGAAAAAATTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaag < 2:2856014/150‑1 (MQ=14) gCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaag > 2:1396611/1‑150 (MQ=255) gCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaag > 1:3836332/1‑150 (MQ=255) ggATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagccc > 1:3102790/1‑150 (MQ=255) ggATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagccc > 1:3745722/1‑150 (MQ=255) gatgatGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagccca > 1:3190804/1‑150 (MQ=255) gatgatGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagccca > 1:5090896/1‑150 (MQ=255) gttgGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaa < 2:5090896/148‑1 (MQ=255) gatgGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaa < 2:2117613/150‑1 (MQ=255) gggAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcc > 2:4016462/1‑150 (MQ=255) ggAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagccc > 2:786877/1‑150 (MQ=255) ccGACGGTTTTGTTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaaa < 2:5124272/150‑1 (MQ=255) ccGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaaa > 1:2468772/1‑150 (MQ=255) cGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaaag > 2:3109956/1‑150 (MQ=255) gACGGTTTTGGTTACTTTGGCCACGACCAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGTATGTCTACTTGATGCGAAAGCGCACAAGccaaaagcccaaaagcccaatagcccaaaagcccaaaagc > 1:2440573/1‑150 (MQ=255) gACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACccaaaagcccaaaagcccaaaagcccaaaagcccaaaagc > 1:2215073/1‑150 (MQ=255) aggtttttGGTTACTTGGGCAACGACCAAAGTACCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCcaaaagcccaaaagcccaaaagcccaaaagcccaaaagcc < 2:2827973/146‑1 (MQ=255) gTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAaagcccaaaagcccaaaagcccaaaagcccaaaagcccaa > 2:4426531/1‑150 (MQ=255) ttttGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAagcccaaaagcccaaaagcccaaaagcccaaaagcccaaa > 2:3180708/1‑150 (MQ=255) ttttGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAagcccaaaagcccaaaagcccaaaagcccaaaagcccaaa > 2:2168963/1‑150 (MQ=255) gTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCttt > 2:3089850/1‑150 (MQ=255) ttAGTTTGGCCACGACAAATGTACCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa < 1:5058583/150‑1 (MQ=255) ttACTTTGGTCGTGGCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa > 2:5310790/1‑150 (MQ=255) ttACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa > 1:1693004/1‑150 (MQ=255) ttACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa > 1:1693392/1‑150 (MQ=255) ttACTTGGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa < 2:4315469/150‑1 (MQ=255) taaattgggCCACCACAAAAGTACCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAAGGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa < 1:912114/143‑1 (MQ=18) tACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAg < 2:2607750/150‑1 (MQ=255) aCTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgc > 2:118417/1‑150 (MQ=255) aCTTTGGCCACGACAAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgc < 1:2707227/150‑1 (MQ=255) cTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcg > 1:1037792/1‑150 (MQ=255) cTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcg > 2:1629397/1‑150 (MQ=255) tttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcgc > 1:763157/1‑150 (MQ=255) tttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcgc > 2:66934/1‑150 (MQ=255) tttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcgc > 2:3175375/1‑150 (MQ=255) tttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcgc > 1:4622679/1‑150 (MQ=255) ttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGcc < 1:3586843/150‑1 (MQ=255) tGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagc < 1:3359211/117‑1 (MQ=255) gCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGt > 2:561470/1‑150 (MQ=255) ccACGACCAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGtt < 2:4687029/150‑1 (MQ=255) ccACGACCAACTTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGtt < 1:2657480/150‑1 (MQ=255) ccACGACCAAAGCAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGtt < 2:4687112/150‑1 (MQ=255) | GGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTT > NC_002947/2089654‑2089949 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |