| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,089,805 | A→G | 5.2% | intergenic (+653/+265) | PP_1865 → / ← aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,089,805 | 0 | A | G | 5.2% | 456.0 / 9.7 | 154 | intergenic (+653/+265) | PP_1865/aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase |
| Reads supporting (aligned to +/- strand): ref base A (99/46); new base G (3/5); total (102/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.37e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
TGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTTCTGAT > NC_002947/2089656‑2089954 | tGACGGGGATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGa < 2:2761404/150‑1 (MQ=21)tGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGa < 2:1232915/150‑1 (MQ=34) gggCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCaa > 1:3341389/1‑150 (MQ=34) ggCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCaaa < 2:4212037/150‑1 (MQ=34) gCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAg > 1:1577983/1‑150 (MQ=34) gCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAg > 1:4890680/1‑150 (MQ=34) gCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTATGGTTACTTTGGCCACGACCAAAg > 1:1577841/1‑150 (MQ=21) tggtggCCCGTCACGCGGTGGGCCCCTGTTTGGGGCCGGCCGCGCGGTCCTCCGGGGAGCAAGCCGGGCGTGTGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAGTaa < 1:601052/145‑1 (MQ=11) tGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAGTaa < 2:1339486/150‑1 (MQ=255) tGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTaa < 2:3507558/150‑1 (MQ=34) ggATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAAc > 1:3969557/1‑150 (MQ=34) gATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAAcc > 1:2207869/1‑150 (MQ=34) aTGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGATCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAAccc > 1:4687112/1‑150 (MQ=21) aTGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGATCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAAccc > 1:4687029/1‑150 (MQ=21) tGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATTATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACccg > 2:4151953/1‑150 (MQ=21) ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACccgccg > 2:2308085/1‑150 (MQ=34) ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACccgccg > 2:5093936/1‑150 (MQ=34) ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTGTGGCCACGACCAAAGTAACccgccg > 2:1657902/1‑150 (MQ=21) gcgcTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGc < 2:5422015/150‑1 (MQ=34) gcTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCgg > 2:2491672/1‑150 (MQ=34) aggCCCCATCCTGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGaaa > 2:3615707/2‑150 (MQ=255) ccccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGagatcg > 1:1566310/1‑145 (MQ=21) cccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTg > 1:3423353/1‑150 (MQ=34) cccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTg > 1:2936860/1‑150 (MQ=34) cctggtgggggCCTGCCGGGCGGTCCTCCGGGTAGCACGCCCGGTGTGTGGGGACCCGGGTGCGTTGGGTTGGGGCCGTATGTTGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACAAATGTAACCCGCCGGAAGGGCGGAAAGGTGa < 1:4083199/143‑1 (MQ=11) atcctGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAAt > 2:195057/5‑150 (MQ=21) gATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAGTaa > 2:5294606/1‑122 (MQ=255) gCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCt > 2:2442750/1‑150 (MQ=34) gCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCt > 1:1357342/1‑150 (MQ=34) ccTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTa > 2:3736839/1‑150 (MQ=35) tGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACa > 2:4050922/1‑150 (MQ=37) gCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACAt > 2:3607444/1‑150 (MQ=37) ggggggTCCTCCGGGTAGCACGCCGGGTGTGGGGGGCCCCGGGCGCGTTGGGTTGGGGCGGGATGTTGGGTGCCGAGGTTTTTGTTTACTTTGGCCACGACAAAATTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGt < 2:3410245/146‑1 (MQ=2) tcctccCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGtgaatga > 1:697850/1‑150 (MQ=37) cctccGGGTAGCACGCCGGTTGTGCGGGCACCCCGGAGCGTCGCGTAGGGGCCGGATGTTGGGAGCCGCCGGTTTTGGTTACTTGGGCCACGACAAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGtgaatgaa < 2:5169852/150‑1 (MQ=11) ctccGGGTAGCACGCCGGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGTATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTgaatgaat < 2:4415361/150‑1 (MQ=11) ctccGGGGAGCAAGCCGGGTGTGAGGGGACCCGGGTGGTTTGCGTTGGGGCCGTATGTTGGGAGCCGCCGTTTTTGGTTACTTTGGCCACGACAAATGAAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTgaatgaat < 2:3794250/150‑1 (MQ=11) ctccCGGGTGCACGCCGGGCTTGTGGGGACCCCGGCGCGTCGCGTTGGGGCGGTTTTATGGGAGCCGAGGGTTTGGGTACCTTTGGCCACGACCAATGTACCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTgaatgaat < 2:2577307/150‑1 (MQ=11) ctccCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTgaatgaat > 1:2876466/1‑150 (MQ=37) ccGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGtg > 2:4929504/1‑149 (MQ=37) ccGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTc > 2:104535/1‑150 (MQ=37) cGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAGTaa < 2:2949926/97‑1 (MQ=11) ggAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTAc < 2:4993618/150‑1 (MQ=37) cAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATTATGGGAGCCGACGGTTTTGGTTACTTTGGCAACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGa < 2:3576997/150‑1 (MQ=255) aaGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGAt > 2:5155842/1‑150 (MQ=37) gCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGc > 2:608441/1‑150 (MQ=38) ggtgtgtGGGGACCCGGGTGGGTTGGTTTGGGGCGGGATGTTGGGAGCCGCGGTTTTTGGTTACTTTGGCCACGACAAAATTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGaaa < 2:4578030/147‑1 (MQ=14) ggtggggACCCCGGTGGTTTGGGTTGGGGCGTTATTTTGGGAGCCTAGGTTTTTGTTTACTTTGGCCACGACAAATGTAACCCGCCGGAAGGGCGGGAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAgcgc < 2:603574/147‑1 (MQ=11) ngACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAc > 1:2000941/2‑150 (MQ=39) gACCCCGGAGCGTTGCGTTGGGGCCGGTTGATGGGAGCCGACGGTTTTGGTTACTTGGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcc < 2:2166928/150‑1 (MQ=255) gACCCCGGAGCGTCGCTTTGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcc < 2:2166817/150‑1 (MQ=255) cccGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaa > 1:1101137/1‑150 (MQ=39) agcgtagGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaa > 1:5041580/1‑150 (MQ=255) ggggCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaa > 1:5037398/1‑150 (MQ=255) gggcgttatgttgGGAGCGGATGTTTTTGGTTACTTTGGACAGTACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGTATAGGCGCCTACATCGTGTATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaa < 2:3063058/143‑1 (MQ=14) ggcggtatgttgGGAGCCGAGGTTTTTGTTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaa < 1:5441834/144‑1 (MQ=14) gCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaag > 2:1396611/1‑150 (MQ=255) gCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaag > 1:3836332/1‑150 (MQ=255) ggATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagccc > 1:3102790/1‑150 (MQ=255) gatgatGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagccca > 1:5090896/1‑150 (MQ=255) gttgGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaa < 2:5090896/148‑1 (MQ=255) gatgGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaa < 2:2117613/150‑1 (MQ=255) gatgGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaa > 1:5166861/1‑150 (MQ=255) gggAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcc > 2:4016462/1‑150 (MQ=255) ggAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagccc > 2:786877/1‑150 (MQ=255) ccGTCGGTTTTGGTTACTTTGGCCACGACAAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaaa < 2:4862121/150‑1 (MQ=255) ccGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaaa > 1:2468772/1‑150 (MQ=255) cGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaaag > 2:3109956/1‑150 (MQ=255) gACGGTTTTGGTTACTTTGGCCACGACCAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGTATGTCTACTTGATGCGAAAGCGCACAAGccaaaagcccaaaagcccaatagcccaaaagcccaaaagc > 1:2440573/1‑150 (MQ=255) gACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACccaaaagcccaaaagcccaaaagcccaaaagcccaaaagc > 1:2215073/1‑150 (MQ=255) aggtttttGGTTACTTGGGCAACGACCAAAGTACCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCcaaaagcccaaaagcccaaaagcccaaaagcccaaaagcc < 2:2827973/146‑1 (MQ=255) ttttGGTTAGTTTGGCCACGACAAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAagcccaaaagcccaaaagcccaaaagcccaaaagcccaaa < 2:3969557/150‑1 (MQ=255) ttttGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAagcccaaaagcccaaaagcccaaaagcccaaaagcccaaa > 2:3180708/1‑150 (MQ=255) ttGTTTACTTTGGCCACGACCAAATTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGc < 1:1745052/150‑1 (MQ=255) gTTACTTTGGCCTCGACAAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCttt < 2:2879390/150‑1 (MQ=255) tttcTTGGGCCACGACAAAAGTACCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa < 1:43461/147‑1 (MQ=255) ttACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa > 1:3182149/1‑150 (MQ=255) ttACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa > 1:1693004/1‑150 (MQ=255) ttACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa > 1:2973726/1‑150 (MQ=255) ttACTTGGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa < 2:4315469/150‑1 (MQ=255) aCTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgc > 2:118417/1‑150 (MQ=255) aCTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgc < 2:2207869/150‑1 (MQ=255) cTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcg > 1:1037792/1‑150 (MQ=255) cTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcg > 2:1629397/1‑150 (MQ=255) tttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcgc > 2:66934/1‑150 (MQ=255) tttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcgc > 1:826100/1‑150 (MQ=255) tttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcgc > 1:4622679/1‑150 (MQ=255) tttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcgc > 1:4641553/1‑150 (MQ=255) tttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcgc > 1:763157/1‑150 (MQ=255) tttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGACCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcgc > 2:3175265/1‑150 (MQ=255) ttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGcc < 1:3586843/150‑1 (MQ=255) tGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagc < 1:3359211/117‑1 (MQ=255) tGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagc > 2:3359211/1‑117 (MQ=255) ccACGACCAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGtt < 2:4687029/150‑1 (MQ=255) ccACGACCAACTTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGtt < 1:2657480/150‑1 (MQ=255) ccACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGtt > 2:5238531/1‑150 (MQ=255) ccACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTATAGCGCCGGtt > 1:3824923/1‑150 (MQ=255) ccACGACCAAAGCAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGtt < 2:4687112/150‑1 (MQ=255) cACGACAAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTTc < 2:1880449/150‑1 (MQ=255) aCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTTCTGAt > 2:613130/1‑150 (MQ=255) | TGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTTCTGAT > NC_002947/2089656‑2089954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |