| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,099,428 | G→C | 7.1% | S137T (AGT→ACT) | gpx → | hydroperoxy fatty acid reductase Gpx1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,099,428 | 0 | G | C | 7.1% | 606.1 / 26.9 | 184 | S137T (AGT→ACT) | gpx | hydroperoxy fatty acid reductase Gpx1 |
| Reads supporting (aligned to +/- strand): ref base G (92/79); new base C (9/4); total (101/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 184 total aligned reads displayed.
GGCGTGAGTTTTCCGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTC > NC_002947/2099280‑2099575 | ggCGTGAGTTTTCCGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGt < 2:2659398/150‑1 (MQ=255) gCGTGAGTTTTCCGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTg < 2:3041807/150‑1 (MQ=255) gTGAGTTTTCCGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGc > 1:4412593/1‑150 (MQ=255) tGAGTTTTCCGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGcc > 1:990211/1‑150 (MQ=255) gAGTTTTCCGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCa < 1:1916388/150‑1 (MQ=255) gTTTTCCGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAgg > 1:1723235/1‑150 (MQ=255) gTTTTCCGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAgg < 2:2830264/150‑1 (MQ=255) tCCGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCaa < 1:1324802/150‑1 (MQ=255) ccGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAg < 2:3622616/150‑1 (MQ=255) cGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAg > 1:1507681/1‑143 (MQ=255) cGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAg < 2:1507681/143‑1 (MQ=255) gCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAgcg > 1:4621684/1‑150 (MQ=255) tGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCt < 2:658234/150‑1 (MQ=255) tttCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTAt < 1:5137393/150‑1 (MQ=255) cGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGcc < 1:936024/150‑1 (MQ=255) gCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGccc < 2:2766437/150‑1 (MQ=255) cAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTAGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACAAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGcccc > 1:2428276/1‑150 (MQ=255) tCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCccacca < 2:2640770/150‑1 (MQ=255) aaCGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCca > 1:5047361/1‑150 (MQ=255) aaCGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCca > 1:3502200/1‑150 (MQ=255) aaCGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCca < 2:4986612/150‑1 (MQ=255) aaCGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCca > 2:4277409/1‑150 (MQ=255) gCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAgg < 2:1222230/150‑1 (MQ=255) cGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGccc < 1:3139492/150‑1 (MQ=255) cGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGccc > 1:3460556/1‑150 (MQ=255) gggCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCt < 1:3857714/150‑1 (MQ=255) tCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGc > 1:4694759/1‑150 (MQ=255) tCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGc > 1:2693255/1‑150 (MQ=255) cccTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGa > 1:4165803/1‑150 (MQ=255) ccTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGAc > 2:3667027/1‑150 (MQ=255) tctGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGACACAGGCCCTGGAGGCGGACAt > 1:3374962/1‑150 (MQ=255) ctGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATc < 2:5217258/150‑1 (MQ=255) ctGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATc < 1:4204634/150‑1 (MQ=255) ggtcgtcgAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGa < 1:3791519/148‑1 (MQ=255) gTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGa > 1:3718311/1‑150 (MQ=255) gtcgAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGt > 1:1489114/1‑150 (MQ=255) tcgAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGtt > 2:3721017/1‑150 (MQ=255) tcgAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGtt > 2:169405/1‑150 (MQ=255) tcgAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGtt < 2:1818925/150‑1 (MQ=255) gAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCGGGAGGCGGACATCGAGCGTTTg > 2:524069/1‑150 (MQ=255) tCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCa > 2:3602650/1‑150 (MQ=255) aaGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGc > 2:3531988/1‑150 (MQ=255) aaGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGc > 2:3392663/1‑150 (MQ=255) aaGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGc > 2:4674521/1‑150 (MQ=255) aaGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGc > 2:703394/1‑150 (MQ=255) aGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGcc > 2:4172717/1‑150 (MQ=255) aGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGcc < 2:1752666/150‑1 (MQ=255) gCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGt > 2:4690086/1‑139 (MQ=255) gCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGt < 1:4690086/139‑1 (MQ=255) gCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCg > 1:778309/1‑150 (MQ=255) gCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCg > 1:3538421/1‑150 (MQ=255) gcgcCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGaa > 1:3375552/1‑150 (MQ=255) gcCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAgg > 2:4796434/1‑150 (MQ=255) cccGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGc > 2:3181517/1‑150 (MQ=255) cccGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGc > 2:3181556/1‑150 (MQ=255) cccGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGc < 2:5068938/150‑1 (MQ=255) ccGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCa > 1:1121397/1‑150 (MQ=255) aTTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAAt < 1:1551332/150‑1 (MQ=255) ttGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGCGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGt > 2:2566457/1‑150 (MQ=255) ttGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGCGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGt > 2:5292610/1‑150 (MQ=255) tGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCGCCCAATGGTc < 2:3622585/150‑1 (MQ=255) tGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATg < 1:1372729/147‑1 (MQ=255) tGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATg > 2:1372729/1‑147 (MQ=255) tGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTc < 1:4469391/150‑1 (MQ=255) aGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCa > 1:1102955/1‑150 (MQ=255) gCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAg > 1:4293372/1‑150 (MQ=255) cAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAggg < 1:763132/150‑1 (MQ=255) agaagaTCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGc > 2:405307/1‑150 (MQ=255) gaagaTCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGa > 1:366903/1‑105 (MQ=255) agaTCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAg < 1:2242734/150‑1 (MQ=255) aTCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTa < 1:2124085/150‑1 (MQ=255) tCAAGTGGAACTTCACCACGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCCAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAAGGGTCGACCAGGGCCAGTAg > 2:2000297/1‑150 (MQ=255) cAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGc < 1:4796434/150‑1 (MQ=255) tGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCtt > 2:3598134/1‑150 (MQ=255) tGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCtt > 1:5378762/1‑150 (MQ=255) ggAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAAt > 2:4136717/1‑125 (MQ=255) gAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTcg > 2:4126219/1‑150 (MQ=255) aCTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCAcc < 1:4224342/118‑1 (MQ=255) cTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCgcgg < 1:3598134/150‑1 (MQ=255) ttCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGTGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCgcggc < 2:4412593/150‑1 (MQ=255) ttCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCgcggc > 2:2238806/1‑150 (MQ=255) ttCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCgcggc > 1:740519/1‑150 (MQ=255) gtCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCGATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCGTCgcggc < 2:5101626/149‑1 (MQ=255) aCCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGa > 2:337498/1‑150 (MQ=255) cAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAg < 1:4123887/105‑1 (MQ=255) tttCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCt > 2:1444155/1‑150 (MQ=255) tttCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCt > 2:1444197/1‑150 (MQ=255) tGGTCGACCCGGCCAGTGGCCAGGGCAAGCGCTATGCCCCCACCACCAAGCCCCAGGCCCTGGAGGCGGACATCGGGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGACGACCCGGGCCAGTCGCTCTACGCGGCGGAATGGCTTGGc > 2:735725/1‑150 (MQ=255) cgcttgACCTGGCCACTGGCCGGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGc > 1:1787803/6‑150 (MQ=255) gacGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAAAGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGccc > 2:195468/3‑149 (MQ=255) gTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCACTGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCa > 2:195278/1‑150 (MQ=255) gTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCa > 2:400076/1‑150 (MQ=255) cttgACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCa > 2:2475305/4‑150 (MQ=255) ttgACCTGGCCACTGGCCGGGTCGAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAgg > 1:3606201/3‑115 (MQ=255) ttgACCTGGCCACTGGCCGGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCgcggc < 2:3178181/132‑1 (MQ=255) ttgACCTGGCCACTGGCCGGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCgcggc > 1:3178181/3‑134 (MQ=255) ttgACCTGGCCACTGGCCGGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAg > 2:4297603/3‑150 (MQ=255) ttgACCTGGCCACTGGCCGGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAg > 1:1208682/3‑150 (MQ=255) ccGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTg < 1:2529765/75‑1 (MQ=255) cAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTc < 2:990211/150‑1 (MQ=255) | GGCGTGAGTTTTCCGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTC > NC_002947/2099280‑2099575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |