BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,106,662	A→G	5.2%	F63L (TTC→CTC)	PP_1879 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,106,662	0	A	G	5.2%	424.3 / 7.6	133	F63L (TTC→CTC)	PP_1879	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (67/59); new base G (3/4); total (70/63)
Fisher's exact test for biased strand distribution p-value = 7.07e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.49e-01

Only 100 of 139 total aligned reads displayed.

TTCAATAAGCTTGTCGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCT  >  NC_002947/2106513‑2106811

ttCAATAAGCTTGTCGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGaa                                                                                                                                                       >  1:967804/1‑150 (MQ=255)

 tCAATAAGCTTGTCGACCGGTACCAATATGAATAGCTCGTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAAc                                                                                                                                                      <  2:3953511/150‑1 (MQ=255)

   aaTAAGCTTGTCGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTATAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTc                                                                                                                                                    >  2:4602682/1‑150 (MQ=255)

   aaTAAGCTTGTCGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTc                                                                                                                                                    >  1:4516149/1‑150 (MQ=255)

   aaTAAGCTTGTCGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTc                                                                                                                                                    >  2:3394042/1‑150 (MQ=255)

     tAAGCTTGTCGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCa                                                                                                                                                  >  1:1529532/1‑150 (MQ=255)

           tGTCGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAGTTCCACCCgtg                                                                                                                                            <  2:4918897/150‑3 (MQ=255)

            gTCGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAGTTCCACCCgtgg                                                                                                                                           <  2:5139106/150‑4 (MQ=255)

            gTCGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGATTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAg                                                                                                                                           <  2:1922081/150‑1 (MQ=255)

             tCGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAgg                                                                                                                                          <  2:4244086/150‑1 (MQ=255)

             tCGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAgg                                                                                                                                          <  2:968444/150‑1 (MQ=255)

             tCGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAgg                                                                                                                                          <  2:2087144/150‑1 (MQ=255)

             tCGACCGGTACCAATATGAACAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAgg                                                                                                                                          <  1:2435456/150‑1 (MQ=255)

              cGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAggg                                                                                                                                         <  1:5410399/150‑1 (MQ=255)

               gACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAgggg                                                                                                                                        <  2:2575040/150‑1 (MQ=255)

               gACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAgggg                                                                                                                                        <  2:794921/150‑1 (MQ=255)

               gACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAgggg                                                                                                                                        >  2:1672460/1‑150 (MQ=255)

                     tACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATa                                                                                                                                  <  1:4582030/150‑1 (MQ=255)

                      aCCAATATGCATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAg                                                                                                                                 <  2:2142831/150‑1 (MQ=255)

                      aCCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAg                                                                                                                                 <  2:967804/150‑1 (MQ=255)

                            atGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGcc                                                                                                                           <  1:418585/150‑1 (MQ=255)

                              gAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCg                                                                                                                         <  1:1740446/150‑1 (MQ=255)

                                aTAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGa                                                                                                                       >  1:3190042/1‑150 (MQ=255)

                                  aGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAAc                                                                                                                     <  2:4105574/150‑1 (MQ=255)

                                  aGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAAc                                                                                                                     <  2:4105480/150‑1 (MQ=255)

                                   gCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGCAACt                                                                                                                    >  2:3603002/1‑150 (MQ=255)

                                     tctTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCg                                                                                                                  >  2:3114447/1‑150 (MQ=255)

                                       ttCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGAc                                                                                                                >  2:1220818/1‑150 (MQ=255)

                                       ttCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGAc                                                                                                                >  1:4060404/1‑150 (MQ=255)

                                            gTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCgtgt                                                                                                           >  1:5037191/1‑150 (MQ=255)

                                             ttCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAggggg                                                                                                                                       <  1:3668302/121‑1 (MQ=255)

                                                   aGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGATGCCCGGAACTCGACCGTGTGGGGttt                                                                                                    >  1:3307180/1‑150 (MQ=255)

                                                    ggCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTc                                                                                                   <  1:4377723/150‑1 (MQ=255)

                                                      cTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTccc                                                                                                 <  1:4953518/150‑1 (MQ=255)

                                                           tGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGaa                                                                                                                      >  1:3183017/1‑124 (MQ=255)

                                                           tGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGaa                                                                                                                      <  2:3183017/124‑1 (MQ=255)

                                                           tGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCtt                                                                                            >  1:1053392/1‑150 (MQ=255)

                                                            gAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTc                                                                                           >  2:3580295/1‑150 (MQ=255)

                                                             aaGGTCTTCTTGTCGACCAGAACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCa                                                                                          >  2:3095762/1‑150 (MQ=255)

                                                               ggTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTcccccccacggg                                                                                        >  2:1842395/1‑144 (MQ=255)

                                                               ggTCTTCTGGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCATCATCTATTTCCGGGTGCGAATTTGCCCCCGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTGGGGTTTCCCCCCTTCAAc                                                                                        >  1:2571750/1‑150 (MQ=255)

                                                                   ttcttGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCg                                                                                    >  2:3512636/1‑150 (MQ=255)

                                                                      ttGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTg                                                                                                         >  1:4810053/1‑126 (MQ=255)

                                                                      ttGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTg                                                                                                         <  2:4810053/126‑1 (MQ=255)

                                                                      ttGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTcc                                                                                 >  2:4240844/1‑150 (MQ=255)

                                                                        gTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTccac                                                                               >  2:2213627/1‑150 (MQ=255)

                                                                         tCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTccac                                                                               <  2:285270/149‑1 (MQ=255)

                                                                         tCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTccac                                                                               >  1:285270/1‑149 (MQ=255)

                                                                           gACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCcaccac                                                                            >  1:2642002/1‑150 (MQ=255)

                                                                                gTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGACTTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGACCTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTg                                                                       >  2:5393722/1‑150 (MQ=255)

                                                                                            aGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTgggg                                                           <  1:1620702/150‑1 (MQ=255)

                                                                                            aGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCACAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTgggg                                                           <  1:97106/150‑1 (MQ=255)

                                                                                               agagGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGa                                                        <  1:5317744/150‑1 (MQ=255)

                                                                                               agagGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGa                                                        <  2:5037191/150‑1 (MQ=255)

                                                                                                  ggAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACaa                                                     <  1:3800870/150‑1 (MQ=255)

                                                                                                   gAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGTCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAag                                                    >  2:863124/1‑150 (MQ=255)

                                                                                                   gAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAag                                                    >  1:1211105/1‑150 (MQ=255)

                                                                                                    aaaaGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAaga                                                   <  2:2126086/150‑1 (MQ=255)

                                                                                                     aaaGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAagag                                                  >  2:4642429/1‑150 (MQ=255)

                                                                                                      aaGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAagaga                                                 <  1:3420022/150‑1 (MQ=255)

                                                                                                       aGGTAGTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAagagag                                                <  1:1762201/150‑1 (MQ=255)

                                                                                                             tCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCA‑GGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGt                                         <  2:2249646/150‑1 (MQ=255)

                                                                                                              ccTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGt                                         >  1:3326365/1‑150 (MQ=255)

                                                                                                              ccTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGt                                         >  1:1346688/1‑150 (MQ=255)

                                                                                                              ccTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGt                                         >  1:1346674/1‑150 (MQ=255)

                                                                                                               cTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAAt                                                                                                                                   <  2:1465503/59‑1 (MQ=255)

                                                                                                               cTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTc                                        >  2:661390/1‑150 (MQ=255)

                                                                                                                tCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTcc                                       >  1:1095/1‑150 (MQ=255)

                                                                                                                  aTCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAg                                     >  1:3524066/1‑150 (MQ=255)

                                                                                                                    cTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGtt                                   <  2:794608/150‑1 (MQ=255)

                                                                                                                       tttCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAg                                >  1:219725/1‑150 (MQ=255)

                                                                                                                       tttCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAg                                >  2:518911/1‑150 (MQ=255)

                                                                                                                        ttCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAgg                               >  2:3943768/1‑150 (MQ=255)

                                                                                                                        ttCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAgg                               >  2:1289282/1‑150 (MQ=255)

                                                                                                                         tCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAggg                              <  2:4277575/150‑1 (MQ=255)

                                                                                                                            gggTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACGTCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGtt                           <  1:650257/150‑1 (MQ=255)

                                                                                                                            gggTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGtt                           <  2:5213340/150‑1 (MQ=255)

                                                                                                                            gggTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGtt                           <  2:2334352/150‑1 (MQ=255)

                                                                                                                            gggTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGtt                           >  1:685711/1‑150 (MQ=255)

                                                                                                                                 cGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGt                      >  1:2171384/1‑150 (MQ=255)

                                                                                                                                  gAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGtt                     >  2:3405074/1‑150 (MQ=255)

                                                                                                                                  gAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGtt                     >  2:1991509/1‑150 (MQ=255)

                                                                                                                                      ccccccACGGGTGGAACTCCACCCGTGGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGc                 >  1:1721638/4‑150 (MQ=255)

                                                                                                                                       tGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCg                <  1:473677/150‑1 (MQ=255)

                                                                                                                                       tGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCg                <  1:3321030/150‑1 (MQ=255)

                                                                                                                                       cccctgcGGGTGGAGTTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCg                >  2:2903187/7‑150 (MQ=255)

                                                                                                                                        ccctgcGGGTGGAGTTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGa                                           <  2:2826743/117‑1 (MQ=255)

                                                                                                                                        ccctgcGGGTGGAGTTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGGTGGGGGGACAAGAGAGGCCGa                                           >  1:2826743/6‑122 (MQ=255)

                                                                                                                                          ctgcGGGTGGAGTTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGtt             >  2:2392219/4‑150 (MQ=255)

                                                                                                                                          ctgcGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGtt             >  1:1156465/4‑150 (MQ=255)

                                                                                                                                          ccACGGGTGGAACTCCACCCGCAGGGGGGCATCCGGGCCCCGGCACTCGACCGCGCTGGGTTTCCCCCCGTCCTCCTCGACCGCAACGCGGGCGACGGGTGGCGGGACGAGAGCGGCCGAGTCCAGGTCAGGGGTGGGAGTTCTGCGGtg             >  2:3872953/1‑149 (MQ=255)

                                                                                                                                          ccACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTc                    <  2:3290042/143‑1 (MQ=255)

                                                                                                                                          ccACGGGTGGAACTCCACCCGCAGGGGGGAAGAGGTTGCCCGGAACTCGACCGTGGTGGGTTTCCCCCCTTCCACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGtt             >  1:420440/1‑150 (MQ=255)

                                                                                                                                           cACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTa            >  2:2761985/1‑150 (MQ=255)

                                                                                                                                            aCGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTgggg                                                           <  2:289057/102‑1 (MQ=255)

                                                                                                                                                   gAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTgg                                                             >  2:3531905/1‑93 (MQ=255)

                                                                                                                                                   gAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGCCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAgcg    <  2:5382646/150‑1 (MQ=255)

                                                                                                                                                    aaCTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAgcgc   >  2:1988738/1‑150 (MQ=255)

                                                                                                                                                    aaCTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAgcgc   <  2:685711/150‑1 (MQ=255)

                                                                                                                                                     aCTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCt  <  1:3095762/150‑1 (MQ=255)

TTCAATAAGCTTGTCGACCGGTACCAATATGAATAGCTCTTCAGGTTCGATAGGCTTGCTGAAGGTCTTCTTGTCGACCAGTACGTCATTCCAGTAGAGGAAAAGGTATTCCTCATCTATTTCCGGGTGCGAATTTGCCCACGGGTGGAACTCCACCCGCAGGGGGGAATAGGTTGCCCGGAACTCGACCGTGTTGGGTTTCCCCCCTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCT  >  NC_002947/2106513‑2106811

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`