BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,120,683	G→C	7.6%	P798P (CCG→CCC)	PP_1884 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,120,683	0	G	C	7.6%	546.7 / 23.5	168	P798P (CCG→CCC)	PP_1884	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (73/82); new base C (8/5); total (81/87)
Fisher's exact test for biased strand distribution p-value = 3.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 181 total aligned reads displayed.

CATGGCCCGGGGCAGATCGATATCGATGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTACCAATTAC  >  NC_002947/2120534‑2120829

cATGGCCCGGGGCAGATCGATATCGATGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTgctgccg                                                                                                                                                    >  1:2871155/1‑150 (MQ=255)

     cccGGGGCAGATCGATATCGATGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTgctgccgctgcc                                                                                                                                               >  1:2900948/1‑150 (MQ=255)

       cGGGGCAGATCGATATCGATGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCtgccgctgccgc                                                                                                                                             <  1:4898918/150‑1 (MQ=255)

               atcgatatcgatGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCCCAGcggcagcggcag                                                                                                                                     <  2:253702/150‑1 (MQ=255)

                 cgttatcgatGAAGCCGGCTAGCCTTTCTACCTGGCTGCCGCCGCGTGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCGCGACTTACCCATCACGCTCGCGGGTTTCATCGTGCTGCCCCAGCggcagcggcagct                                                                                                                                   <  1:1448143/147‑2 (MQ=255)

                   atatcgatGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGcaca                                                                                                                                 <  2:3806364/150‑1 (MQ=255)

                   atatcgatGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGcaca                                                                                                                                 <  2:2033123/150‑1 (MQ=255)

                    tatcgatGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCCCAGCGGCAGCGGCAGcacga                                                                                                                                <  2:1045198/150‑3 (MQ=255)

                         atGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCCGCACAGTCAAg                                                                                                                           >  2:3509647/1‑150 (MQ=255)

                         atGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAg                                                                                                                           >  2:1730328/1‑150 (MQ=255)

                           gAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGGTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGcc                                                                                                                         >  2:787349/1‑150 (MQ=255)

                              gACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTAt                                                                                                                      >  1:5130552/1‑150 (MQ=255)

                              gACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTAt                                                                                                                      >  1:2170626/1‑150 (MQ=255)

                              gACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTAt                                                                                                                      >  1:2401668/1‑150 (MQ=255)

                               aCGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATc                                                                                                                     <  2:1426456/150‑1 (MQ=255)

                               aCGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATc                                                                                                                     <  2:3110873/150‑1 (MQ=255)

                                   cAAGCCTTACTCCCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGc                                                                                                                 <  2:294869/150‑1 (MQ=255)

                                    aaGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGcc                                                                                                                <  2:1901529/150‑1 (MQ=255)

                                    aaGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGcc                                                                                                                <  2:1901608/150‑1 (MQ=255)

                                       ccTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCtt                                                                                                             <  1:178895/150‑1 (MQ=255)

                                         ttACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGa                                                                                                           <  1:1040543/150‑1 (MQ=255)

                                          tactacCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAg                                                                                                          <  1:1892397/150‑1 (MQ=255)

                                            ctacCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgca                                                                                                        <  2:3041068/150‑1 (MQ=255)

                                            ctacCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgca                                                                                                        <  1:3220229/150‑1 (MQ=255)

                                             tacCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcag                                                                                                       >  1:1638057/1‑150 (MQ=255)

                                              acCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcagg                                                                                                      <  2:3013413/150‑1 (MQ=255)

                                               ccAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcaggc                                                                                                     >  2:748622/1‑150 (MQ=255)

                                               ccAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcaggc                                                                                                     <  2:5316188/150‑1 (MQ=255)

                                               ccAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCAGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcaggc                                                                                                     >  1:2648143/1‑150 (MQ=255)

                                                cAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcaggca                                                                                                    <  2:4337659/150‑1 (MQ=255)

                                                cAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcaggca                                                                                                    >  1:5447167/1‑150 (MQ=255)

                                                 aGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGc                                                                                                                 >  2:370370/1‑136 (MQ=255)

                                                   gCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAgcg                                                                                                 >  2:3817317/1‑150 (MQ=255)

                                                   gCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAgcg                                                                                                 >  1:1236447/1‑150 (MQ=255)

                                                      gACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCaa                                                                                              >  1:398069/1‑150 (MQ=255)

                                                         gccgcGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACgg                                                                                           <  1:3437398/150‑1 (MQ=255)

                                                             cgAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCaa                                                                                       >  1:373160/1‑150 (MQ=255)

                                                             cgAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCaa                                                                                       <  1:1114863/150‑1 (MQ=255)

                                                                 ccccGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAAcgcg                                                                                   <  1:594755/150‑1 (MQ=255)

                                                                  cccGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACgcgc                                                                                  >  1:2073653/1‑150 (MQ=255)

                                                                   ccGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCa                                                                                 >  1:5220619/1‑150 (MQ=255)

                                                                   ccGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCa                                                                                 >  2:2249587/1‑150 (MQ=255)

                                                                      cacaTTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGt                                                                              <  2:1678509/150‑1 (MQ=255)

                                                                        caTTTATGCGTGGTTTTTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGAAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAg                                                                            <  2:4275311/150‑1 (MQ=255)

                                                                              tGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCaa                                                                                       <  1:3014008/133‑1 (MQ=255)

                                                                                   ggttggtGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGt                                                                 <  2:2058186/150‑1 (MQ=255)

                                                                                    gttggtGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGtt                                                                <  2:1292497/150‑1 (MQ=255)

                                                                                     ttggtGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTc                                                               >  1:3692088/1‑150 (MQ=255)

                                                                                         tGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCt                                                           <  1:2149861/150‑1 (MQ=255)

                                                                                            ggTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTaaa                                                        <  2:2815881/150‑1 (MQ=255)

                                                                                             gTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGa                                                                                                           <  1:794244/98‑1 (MQ=255)

                                                                                             gTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAAc                                                       >  2:1272454/1‑150 (MQ=255)

                                                                                                 ggAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCAt                                                   <  2:111802/150‑1 (MQ=255)

                                                                                                 ggAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCAt                                                   <  1:1379311/150‑1 (MQ=255)

                                                                                                  gAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATa                                                  >  1:2788640/1‑150 (MQ=255)

                                                                                                  gAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATa                                                  >  1:2788707/1‑150 (MQ=255)

                                                                                                   aGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATAc                                                 <  1:3489676/150‑1 (MQ=255)

                                                                                                       tctcCCCCGACTTACCCATCTCGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCttt                                             <  2:3111709/150‑1 (MQ=255)

                                                                                                       tctcCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCttt                                             <  1:2570284/150‑1 (MQ=255)

                                                                                                         tcCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCa                                           <  1:2278534/150‑1 (MQ=255)

                                                                                                         tcCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCa                                           <  2:1236447/150‑1 (MQ=255)

                                                                                                         tcCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCa                                           <  2:2684078/150‑1 (MQ=255)

                                                                                                         tcCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCAGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCa                                           <  2:2647894/150‑1 (MQ=255)

                                                                                                          cccccGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAg                                          <  1:4297857/150‑1 (MQ=255)

                                                                                                           ccccGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGc                                         >  2:3997334/1‑150 (MQ=255)

                                                                                                             ccGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCAc                                       >  1:4083840/1‑150 (MQ=255)

                                                                                                                   tACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGt                                 >  1:759553/1‑150 (MQ=255)

                                                                                                                    aCCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGtt                                <  2:440952/150‑1 (MQ=255)

                                                                                                                    aCCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGtt                                <  1:4663227/150‑1 (MQ=255)

                                                                                                                    aCCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGtt                                >  1:3318387/1‑150 (MQ=255)

                                                                                                                      ccATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTCAACCCATACCTTTCAGCACTCAAGTTGa                              >  1:3337857/1‑150 (MQ=255)

                                                                                                                      ccATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGa                              >  1:1725493/1‑150 (MQ=255)

                                                                                                                        aTCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGc                            <  1:5048054/150‑1 (MQ=255)

                                                                                                                        aTCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGc                            >  2:1100113/1‑150 (MQ=255)

                                                                                                                         tCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCg                           >  1:241044/1‑150 (MQ=255)

                                                                                                                         tCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCg                           >  1:5043336/1‑150 (MQ=255)

                                                                                                                          cACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCgg                          >  2:640630/1‑150 (MQ=255)

                                                                                                                           aCGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCggg                         >  2:3618004/1‑150 (MQ=255)

                                                                                                                             gCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGc                       <  2:5119621/150‑1 (MQ=255)

                                                                                                                             gCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGc                       <  1:401137/150‑1 (MQ=255)

                                                                                                                               tCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAg                             >  2:3324330/1‑142 (MQ=255)

                                                                                                                               tCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCca                     >  2:4612512/1‑150 (MQ=255)

                                                                                                                               tCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCca                     <  2:5306421/150‑1 (MQ=255)

                                                                                                                               tCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCca                     >  2:5330542/1‑150 (MQ=255)

                                                                                                                               tCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAA‑CCATACCATTAAGCACTCCAGTTGAGCGGGGCcac                    >  1:623057/1‑150 (MQ=255)

                                                                                                                                      tttCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATg              >  2:1091326/1‑150 (MQ=255)

                                                                                                                                       ttgactgTGCTGCCCCAGCGGCAGCGGCAGCACGGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGc             >  1:2352608/7‑150 (MQ=255)

                                                                                                                                       ttgactgTGCTGCCCCAGCGGCAGCGGCAGCACGGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGc             >  2:4167798/7‑150 (MQ=255)

                                                                                                                                       ttgactgTGCTGCCCCAGCGGCAGCGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGc             >  2:1948749/7‑150 (MQ=255)

                                                                                                                                         gactgTGCTGCCCCAGCGGCAGCGGCAGCACGGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCt           <  2:2348581/146‑1 (MQ=255)

                                                                                                                                         gactgTGCTGCCCCAGCGGCAGCGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCt           >  2:2625655/5‑150 (MQ=255)

                                                                                                                                         gactgTGCTGCCCCAGCGGCAGCGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCt           >  2:3845198/5‑150 (MQ=255)

                                                                                                                                           tCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTAc         <  1:1949828/150‑1 (MQ=255)

                                                                                                                                           tCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAACGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTAc         <  1:1284496/150‑1 (MQ=255)

                                                                                                                                           ctgTGCTGCCCCAGCGGCAGCGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTAc         >  1:1016097/3‑150 (MQ=255)

                                                                                                                                            tgTGCTGCCCCAGCGGCAGCGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTAcc        >  1:2624934/2‑150 (MQ=255)

                                                                                                                                               gctgccgctgccGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTAc         >  1:1907812/1‑146 (MQ=255)

                                                                                                                                                  tgtgctgccccagCGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTACCAATTAc  >  2:1362384/4‑150 (MQ=255)

                                                                                                                                                  gccgctgccgctGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTACCAATTAc  <  1:1100113/150‑1 (MQ=255)

                                                                                                                                                  gccgctgccgctGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTACCAATTAc  >  2:1351442/1‑150 (MQ=255)

CATGGCCCGGGGCAGATCGATATCGATGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTACCAATTAC  >  NC_002947/2120534‑2120829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`