BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,120,693	G→C	7.0%	G802R (GGG→CGG)	PP_1884 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,120,693	0	G	C	7.0%	559.1 / 23.7	171	G802R (GGG→CGG)	PP_1884	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (77/82); new base C (9/3); total (86/85)
Fisher's exact test for biased strand distribution p-value = 1.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01

Only 100 of 177 total aligned reads displayed.

CAGATCGATATCGATGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTACCAATTACCTCTCGGTCATCA  >  NC_002947/2120546‑2120842

cAGATCGATATCGATGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTgggg                                                                                                                                                     <  2:1454631/150‑1 (MQ=255)

   atcgatatcgatGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCCCAGcggcagcggcag                                                                                                                                                  <  2:253702/150‑1 (MQ=255)

     cgttatcgatGAAGCCGGCTAGCCTTTCTACCTGGCTGCCGCCGCGTGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCGCGACTTACCCATCACGCTCGCGGGTTTCATCGTGCTGCCCCAGCggcagcggcagct                                                                                                                                                <  1:1448143/147‑2 (MQ=255)

     cgatatcgatGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCCCAGCGGCAGCGgcagca                                                                                                                                                <  2:1361700/150‑1 (MQ=255)

       atatcgatGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGcaca                                                                                                                                              <  2:3806364/150‑1 (MQ=255)

          tcgatGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTc                                                                                                                                           <  1:2079596/150‑1 (MQ=255)

            gatGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCaa                                                                                                                                         <  1:4585206/150‑1 (MQ=255)

             atGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAg                                                                                                                                        >  2:1730328/1‑150 (MQ=255)

               gAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGGTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGcc                                                                                                                                      >  2:787349/1‑150 (MQ=255)

                  gACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTAt                                                                                                                                   >  1:5130552/1‑150 (MQ=255)

                  gACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTAt                                                                                                                                   >  1:2170626/1‑150 (MQ=255)

                   aCGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATc                                                                                                                                  <  2:3110873/150‑1 (MQ=255)

                    cGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCa                                                                                                                                 <  2:4251027/150‑1 (MQ=255)

                        aaGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGcc                                                                                                                             <  2:1901608/150‑1 (MQ=255)

                             ttACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGa                                                                                                                        <  1:1040543/150‑1 (MQ=255)

                              tactacCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAg                                                                                                                       <  1:1892397/150‑1 (MQ=255)

                                 tacCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcag                                                                                                                    >  2:1423120/1‑150 (MQ=255)

                                 tacCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcag                                                                                                                    >  1:1638057/1‑150 (MQ=255)

                                   ccAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcaggc                                                                                                                  >  2:748622/1‑150 (MQ=255)

                                   ccAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcaggc                                                                                                                  <  2:5316188/150‑1 (MQ=255)

                                   ccAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCAGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcaggc                                                                                                                  >  1:2647894/1‑150 (MQ=255)

                                   ccAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCGCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcaggc                                                                                                                  >  2:3483208/1‑150 (MQ=255)

                                    cAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcaggca                                                                                                                 <  2:4337659/150‑1 (MQ=255)

                                    cAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcaggca                                                                                                                 >  1:2815881/1‑150 (MQ=255)

                                    cAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAgcaggca                                                                                                                 >  1:5447167/1‑150 (MQ=255)

                                     aGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGc                                                                                                                              >  2:370370/1‑136 (MQ=255)

                                     aGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGc                                                                                                                              <  1:370370/136‑1 (MQ=255)

                                       gCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAgcg                                                                                                              >  1:1236527/1‑150 (MQ=255)

                                       gCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAgcg                                                                                                              >  1:1236447/1‑150 (MQ=255)

                                          gACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCaa                                                                                                           <  1:406242/150‑1 (MQ=255)

                                          gACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCaa                                                                                                           >  1:398069/1‑150 (MQ=255)

                                                 cgAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCaa                                                                                                    <  1:1114863/150‑1 (MQ=255)

                                                 cgAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCaa                                                                                                    >  1:373160/1‑150 (MQ=255)

                                                     ccccGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAAcgcg                                                                                                <  1:594755/150‑1 (MQ=255)

                                                      cccGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACgcgc                                                                                               <  1:3622781/150‑1 (MQ=255)

                                                          cacaTTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGt                                                                                           <  2:1678509/150‑1 (MQ=255)

                                                           acaTTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTa                                                                                          <  1:5156752/150‑1 (MQ=255)

                                                             aatacTGCTTGGTTGGTGCCGACTGGAGGCTCTCCACCGACTAACCCAACACGAACGAGGGTTTCATCGTGATGCAGCTGCATCTGGTGAAACACAGTCAAGCCTATCAGGCCCTAGAGCAGGCAGCGCAACGGGAAACGCGCAGCTAGt                                                                                        >  2:5215699/5‑150 (MQ=255)

                                                                  tGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCaa                                                                                                    >  2:3014008/1‑133 (MQ=255)

                                                                  tGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAAcc                                                                                   <  2:3291360/150‑1 (MQ=255)

                                                                       ggttggtGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGt                                                                              <  2:2058156/150‑1 (MQ=255)

                                                                        gttggtGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGtt                                                                             <  2:1292497/150‑1 (MQ=255)

                                                                         ttggtGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTc                                                                            >  1:3226774/1‑150 (MQ=255)

                                                                           ggtGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCAc                                                                          <  1:1730328/150‑1 (MQ=255)

                                                                           ggtGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCAc                                                                          <  1:4973832/150‑1 (MQ=255)

                                                                                ggTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTaaa                                                                     <  2:2815881/150‑1 (MQ=255)

                                                                                ggTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTaaa                                                                     <  1:2406392/150‑1 (MQ=255)

                                                                                 gTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGa                                                                                                                        <  1:794244/98‑1 (MQ=255)

                                                                                    tGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCa                                                                 >  2:1063077/1‑150 (MQ=255)

                                                                                     ggAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCAt                                                                <  1:1379311/150‑1 (MQ=255)

                                                                                      gAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATa                                                               >  1:2788676/1‑150 (MQ=255)

                                                                                         gCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCt                                                            >  1:2684078/1‑150 (MQ=255)

                                                                                           tctcCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCttt                                                          >  1:3457261/1‑150 (MQ=255)

                                                                                           tctcCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCttt                                                          <  1:2570284/150‑1 (MQ=255)

                                                                                             tcCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCa                                                        <  2:1236527/150‑1 (MQ=255)

                                                                                             tcCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCa                                                        <  1:2278534/150‑1 (MQ=255)

                                                                                             tcCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCAGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCa                                                        <  2:2648143/150‑1 (MQ=255)

                                                                                             tcCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCAGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCa                                                        <  2:2647894/150‑1 (MQ=255)

                                                                                               ccccGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAg                                                                                             >  2:1218104/1‑111 (MQ=255)

                                                                                               ccccGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGc                                                      >  2:3997334/1‑150 (MQ=255)

                                                                                                cccGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCa                                                        >  2:3080728/1‑147 (MQ=255)

                                                                                                cccGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCa                                                        <  1:3080728/147‑1 (MQ=255)

                                                                                                 ccGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCAc                                                    >  1:4197008/1‑150 (MQ=255)

                                                                                                  cGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACt                                                   <  2:1765601/150‑1 (MQ=255)

                                                                                                       tACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGt                                              >  1:759553/1‑150 (MQ=255)

                                                                                                        aCCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGtt                                             <  2:440952/150‑1 (MQ=255)

                                                                                                        aCCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGtt                                             <  1:4663227/150‑1 (MQ=255)

                                                                                                          ccATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTCAACCCATACCTTTCAGCACTCAAGTTGa                                           >  1:3337857/1‑150 (MQ=255)

                                                                                                          ccATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGa                                           >  1:2381713/1‑150 (MQ=255)

                                                                                                            aTCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGc                                         >  2:1100113/1‑150 (MQ=255)

                                                                                                            aTCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGc                                         <  1:5048054/150‑1 (MQ=255)

                                                                                                              cACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGtt                                                                             >  2:2996130/1‑112 (MQ=255)

                                                                                                              cACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGtt                                                                             <  1:2996130/112‑1 (MQ=255)

                                                                                                              cACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCgg                                       >  2:640630/1‑150 (MQ=255)

                                                                                                               aCGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCACCGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCggg                                      >  2:3614435/1‑150 (MQ=255)

                                                                                                               aCGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCggg                                      >  2:3618004/1‑150 (MQ=255)

                                                                                                               aCGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCggg                                      <  2:2091838/150‑1 (MQ=255)

                                                                                                               aCGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCggg                                      >  2:1949828/1‑150 (MQ=255)

                                                                                                                cGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCgggg                                     <  1:1986112/150‑1 (MQ=255)

                                                                                                                 gCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGc                                    <  2:1112094/150‑1 (MQ=255)

                                                                                                                 gCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGc                                    <  2:4793554/150‑1 (MQ=255)

                                                                                                                   tCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCACCGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCca                                  >  2:3830724/1‑150 (MQ=255)

                                                                                                                   tCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAg                                          <  1:3324330/142‑1 (MQ=255)

                                                                                                                   tCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCca                                  >  2:5330542/1‑150 (MQ=255)

                                                                                                                   tCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCca                                  >  1:2530886/1‑150 (MQ=255)

                                                                                                                   tCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAA‑CCATACCATTAAGCACTCCAGTTGAGCGGGGCcac                                 >  1:623057/1‑150 (MQ=255)

                                                                                                                   tCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAACGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCca                                  >  2:1284496/1‑150 (MQ=255)

                                                                                                                           ttgactgTGCTGCCCCAGCGGCAGCGGCAGCACGGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGc                          >  1:2348581/7‑150 (MQ=255)

                                                                                                                           ttgactgTGCTGCCCCAGCGGCAGCGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGc                          >  2:1948749/7‑150 (MQ=255)

                                                                                                                           ttgaccGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGc                          >  2:4598375/6‑150 (MQ=255)

                                                                                                                             gactgTGCTGCCCCAGCGGCAGCGGCAGCACGGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCt                        <  2:2348581/146‑1 (MQ=255)

                                                                                                                             gactgTGCTGCCCCAGCGGCAGCGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCt                        >  2:2625655/5‑150 (MQ=255)

                                                                                                                             gactgTGCTGCCCCAGCGGCAGCGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCt                        >  2:3845198/5‑150 (MQ=255)

                                                                                                                               tCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTAc                      <  1:1949828/150‑1 (MQ=255)

                                                                                                                               ctgTGCTGCCCCAGCGGCAGCGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTAc                      >  1:1016097/3‑150 (MQ=255)

                                                                                                                                cGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTAcc                     >  1:1654365/1‑150 (MQ=255)

                                                                                                                                   gctgccgctgccGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTAc                      >  1:1907812/1‑146 (MQ=255)

                                                                                                                                      gccgctgccgctGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTACCAATTAc               <  1:1100113/150‑1 (MQ=255)

                                                                                                                                                  ggggCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTACCAATTACCTCTCGGtcatc   <  2:2381713/150‑1 (MQ=255)

                                                                                                                                                   gggCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTACCAATTACCTCTCGGtcatca  >  1:5320665/1‑150 (MQ=255)

CAGATCGATATCGATGAAGACGGCAAGCCTTACTACCAGGCCGACGCCGCGAGCCCCGCACATTTCTGCGTGGTTGGTGCGGTCTGGAGGCTCTCCCCCGACTTACCCATCACGCTCGAGGGTTTCATCGTGCTGCCGCTGCCGCTGGGGCAGCACAGTCAAGCCTATCAGGCCCTTGAGCAGGCAGCGCAACGGGCAACGCGCAGGTAGTCAACCGGCGTTCACCTAAACCCATACCTTTCAGCACTCCAGTTGAGCGGGGCCACATCATGCCTACCAATTACCTCTCGGTCATCA  >  NC_002947/2120546‑2120842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`