| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,149,173 | T→G | 6.3% | intergenic (+81/+36) | murB → / ← rne | UDP‑N‑acetylenolpyruvoylglucosamine reductase/ribonuclease E |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,149,173 | 0 | T | G | 6.3% | 567.2 / 21.5 | 175 | intergenic (+81/+36) | murB/rne | UDP‑N‑acetylenolpyruvoylglucosamine reductase/ribonuclease E |
| Reads supporting (aligned to +/- strand): ref base T (71/93); new base G (4/7); total (75/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.43e-01 | |||||||||||
Only 100 of 175 total aligned reads displayed.
CAAGATTCAGGCGGATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGG > NC_002947/2149026‑2149317 | cAAGATTCAGGCGGATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTg > 1:3896995/1‑150 (MQ=255) ggCGGATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTGCAAACTGGCgg < 1:113099/150‑1 (MQ=255) ggCGGATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTGCAAACTGGCgg < 1:508014/150‑1 (MQ=255) gCGGATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCggg < 1:3468046/150‑1 (MQ=255) gCGGATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTGCAAACTGGCggg < 1:4258434/150‑1 (MQ=255) gCGGATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTGCAAACTGGCggg < 1:1943406/150‑1 (MQ=255) cGGATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTATTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCgggg < 1:260641/150‑1 (MQ=255) cGGATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCgggg < 2:1926847/150‑1 (MQ=255) ggATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGc > 1:4220331/1‑150 (MQ=255) ggATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGc < 2:4361718/150‑1 (MQ=255) tatCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCttt < 2:1587291/150‑1 (MQ=255) tCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCggg < 2:353245/143‑1 (MQ=255) cTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTttc < 1:3117896/150‑1 (MQ=255) ttCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTttca > 2:134647/1‑150 (MQ=255) tCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAACAAGCCCCGCCAGTTTGCACTGGCGGGGCATTttcat < 2:4881818/150‑1 (MQ=255) cGAGCGGTGTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGTGCTTTttcatt < 2:508730/150‑1 (MQ=255) gAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTttcattc < 1:315810/150‑1 (MQ=255) gAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACGGGCGGGGCTTTttcattc > 1:3585591/1‑150 (MQ=255) gCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTGCAAACTGGCGGGGCtttttttggttt < 1:3956856/150‑8 (MQ=38) tggattGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCATTTTCATTCAGc < 2:4372835/146‑1 (MQ=255) tttGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCttt > 2:4135733/1‑150 (MQ=255) ttGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTg < 1:2955144/150‑1 (MQ=255) ggggTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGc > 2:290944/1‑150 (MQ=255) gggTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCt > 2:4865657/1‑150 (MQ=255) gTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTAt < 1:2242082/150‑1 (MQ=255) gTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTAt < 1:1363424/150‑1 (MQ=255) gAGCTGGAGATGGAGCCTAATCTTTACTGCTTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAg < 2:3638079/150‑1 (MQ=255) gCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGcc > 1:1319189/1‑150 (MQ=255) gCTGGAGATGGAGCCTAATCTTTACTGACTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGcc < 1:4861635/150‑1 (MQ=255) tGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTg < 1:5437877/138‑1 (MQ=255) tGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTg > 2:5437877/1‑138 (MQ=255) tGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGt > 1:3938731/1‑150 (MQ=255) tGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGt < 1:264375/150‑1 (MQ=255) agaTGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGtgat < 1:1052225/150‑1 (MQ=255) tGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAg < 1:3696510/150‑1 (MQ=255) gCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGttt < 1:1408293/150‑1 (MQ=255) tAATCTTTACTGCTTTGCCGGCTGTGAACCCCCGGAGGCGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTtgtg < 2:4704619/150‑1 (MQ=255) tAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTtgtg > 2:2351700/1‑150 (MQ=255) aTCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCt < 1:1679813/150‑1 (MQ=255) aTCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCt > 1:661749/1‑150 (MQ=255) tttACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCAt > 1:4102084/1‑150 (MQ=255) aCTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATcgg > 2:3568224/1‑150 (MQ=255) cTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATcggc < 2:2764413/150‑1 (MQ=255) cGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAg < 2:1413802/150‑1 (MQ=255) gCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAACAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTGTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAggg < 2:5040929/150‑1 (MQ=255) tgtgAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGTCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTtgt < 2:4255103/127‑1 (MQ=255) tgtgAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGcc > 1:5399722/1‑113 (MQ=255) tgAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTgg < 1:204317/150‑1 (MQ=255) aaCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTg > 2:987003/1‑99 (MQ=255) aaCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGtt > 2:3181630/1‑150 (MQ=255) aaCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGtt > 2:3181643/1‑150 (MQ=255) ccccGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGt < 1:912278/108‑1 (MQ=255) ccccGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGt > 2:912278/1‑108 (MQ=255) ccccGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCt > 1:3312843/1‑150 (MQ=255) cccGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAGAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTg < 1:1268143/150‑1 (MQ=255) cccGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTg < 1:5446343/150‑1 (MQ=255) cccGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTg > 1:1779205/1‑150 (MQ=255) cccGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCATTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTg < 2:571796/150‑1 (MQ=255) cGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTggg < 1:1575894/150‑1 (MQ=255) cGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTggg < 2:4492253/150‑1 (MQ=255) cGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTggg < 2:1198773/150‑1 (MQ=255) gTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCa < 1:2669061/99‑1 (MQ=255) gTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCa > 2:2669338/1‑99 (MQ=255) tAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAATAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGaa > 1:1247902/1‑150 (MQ=255) aGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAg < 2:4220319/150‑1 (MQ=255) gAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCt > 1:1054658/1‑150 (MQ=255) gCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTgc > 1:5302298/1‑150 (MQ=255) gCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTgc > 2:2392978/1‑150 (MQ=255) cGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTgca < 1:4636317/150‑1 (MQ=255) ggTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTgcagc < 1:921481/150‑1 (MQ=255) gTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCt < 2:3817443/136‑1 (MQ=255) gTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTgcagca > 1:285614/1‑150 (MQ=255) gTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTgcagca < 1:5169473/150‑1 (MQ=255) cccGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAgg > 2:2505915/1‑96 (MQ=255) cccGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAgg < 1:2505915/96‑1 (MQ=255) cccGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTc < 2:3896995/150‑1 (MQ=255) ccGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGGGGCTTCCAGGGCGGGTGCCTGGGTCGCTGCagcagcgtgg > 2:4712388/1‑146 (MQ=255) cgcgAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGaa > 2:5188721/1‑134 (MQ=255) cgcgAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGaa < 1:5188721/134‑1 (MQ=255) gcgAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCTGCAGCTTccca < 1:4438921/150‑3 (MQ=255) cGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTgg < 1:5134006/150‑1 (MQ=255) gTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGgc < 2:1653752/150‑1 (MQ=255) gCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGcagcag > 1:3678302/1‑150 (MQ=255) ccAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCg > 2:1101974/1‑150 (MQ=255) ccAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCg > 1:448295/1‑150 (MQ=255) aaaaaaaGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGc > 1:3199237/1‑150 (MQ=255) aaaaaaaGCCCCGCCAGTTTGCACTGGCGGGGCATTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGc < 2:1895078/150‑1 (MQ=255) gCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGc > 2:1236700/1‑150 (MQ=255) gCCCCGCCAGTGCAAACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGc > 1:1193157/1‑150 (MQ=255) ccccGCCAGTGCAAACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCt > 2:1070036/1‑150 (MQ=255) cccGCCAGTGCAAACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTgc > 2:4549186/1‑105 (MQ=39) cccGCCAGTGCAAACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTgc < 1:4549186/105‑1 (MQ=39) cccGCCAGTGCAAACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCtt > 2:786464/1‑150 (MQ=255) ccGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTccc < 1:2069061/145‑1 (MQ=255) ccGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTccc > 2:2069061/1‑145 (MQ=255) cGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGttt < 2:345567/61‑1 (MQ=255) cGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTgc > 1:4805540/1‑150 (MQ=255) ccAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTgcgg < 2:4058313/150‑1 (MQ=255) ccAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTgcgg > 2:3048299/1‑150 (MQ=255) ccAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTgcgg > 1:856917/1‑150 (MQ=255) | CAAGATTCAGGCGGATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGG > NC_002947/2149026‑2149317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |