| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,195,055 | A→T | 7.4% | intergenic (+184/‑239) | PP_1938 → / → PP_1939 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,195,055 | 0 | A | T | 7.4% | 455.2 / 16.8 | 142 | intergenic (+184/‑239) | PP_1938/PP_1939 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (77/53); new base T (4/7); total (82/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 146 total aligned reads displayed.
GTTCCCACCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGAAGGGCCC > NC_002947/2194906‑2195204 | gTTCCCACCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGaa < 1:5161863/150‑1 (MQ=255) tCCCACCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTGTGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAAtt < 1:4908839/150‑1 (MQ=255) tCCCACCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAAtt < 1:223798/150‑1 (MQ=255) ccACCTAGTTACCAGGCCGACAGGGCGGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATACAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTg > 1:3422216/1‑150 (MQ=255) cACCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGc < 1:2481072/150‑1 (MQ=255) cACCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGc > 2:4745411/1‑150 (MQ=255) aCCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGca > 1:1833922/1‑150 (MQ=255) cTAGGTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGcaca > 1:1453328/1‑150 (MQ=255) tAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAAATTCTGcacac < 1:122669/150‑2 (MQ=255) tAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAAATTCTGcacac < 1:1960803/150‑2 (MQ=255) gtgaCCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGACCAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACAttc < 2:2735317/147‑2 (MQ=255) ttACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTAc > 2:468464/1‑150 (MQ=255) aCCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTa < 2:439615/150‑1 (MQ=255) ccAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAg > 2:3116744/1‑150 (MQ=255) ccAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAg > 1:5056918/1‑150 (MQ=255) ccAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGCGTGCAGAATTTGCACATTACTAg > 2:2575059/1‑150 (MQ=255) cAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAgg > 1:3152287/1‑150 (MQ=255) aGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAggg > 2:2124468/1‑150 (MQ=255) aGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAggg > 1:2008051/1‑150 (MQ=255) ccGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGTAATGTGCAAATTCTGCACACTGCTAggggag < 2:1003643/150‑3 (MQ=38) gCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAAt > 2:4506028/1‑150 (MQ=255) gCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAAt < 1:3620159/150‑1 (MQ=255) cTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATa < 1:468464/150‑1 (MQ=255) tGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAg > 1:621801/1‑150 (MQ=255) ttctttctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAg < 1:2189180/150‑1 (MQ=255) ctttctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTc > 1:2868606/1‑150 (MQ=255) ctttctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTc < 2:608170/150‑1 (MQ=255) tttctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGACTGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTca > 2:3572939/1‑150 (MQ=255) tttctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTca > 1:3236385/1‑150 (MQ=255) ttctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcag > 1:5431217/1‑150 (MQ=255) ttctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcag > 1:5431207/1‑150 (MQ=255) ctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGCCTATTCAGTcagcc < 1:1461429/150‑2 (MQ=255) tGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcagcag > 2:1370913/1‑150 (MQ=255) tGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcagcag > 1:2093402/1‑150 (MQ=255) tGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcagcag > 2:3865654/1‑150 (MQ=255) gCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGa > 2:2587215/1‑150 (MQ=255) gagcggagcgAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGAct > 2:4936543/1‑150 (MQ=255) gagcggagcgAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGAct > 2:547928/1‑150 (MQ=255) gagcggagcgAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGAct > 2:548221/1‑150 (MQ=255) gcggagcgAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGActtc < 1:3854077/150‑1 (MQ=255) gagcgAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAgg < 1:2732434/117‑1 (MQ=255) gagcgAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAgg > 2:2732434/1‑117 (MQ=255) gagcgAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTa < 1:1822228/150‑1 (MQ=255) aCAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGTAATGTGCAAATTCTGCACACTGCTAggg > 2:4929776/1‑112 (MQ=37) cTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCgg > 1:517043/1‑150 (MQ=255) cTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCgg > 1:516762/1‑150 (MQ=255) cccGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAgt < 2:4094292/150‑1 (MQ=255) cccGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAgt > 2:4471651/1‑150 (MQ=255) cGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAgtgt > 1:1617908/1‑150 (MQ=255) gTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGtgtg < 2:2916165/150‑1 (MQ=255) ccTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAgtgt > 2:1212566/1‑146 (MQ=255) tGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAg > 1:255241/1‑150 (MQ=255) aGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGga < 1:1120987/150‑1 (MQ=255) aGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGga < 2:2336185/150‑1 (MQ=255) aGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGga < 2:255241/150‑1 (MQ=255) aGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGga < 2:1033593/150‑1 (MQ=255) aGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGga < 1:1120996/150‑1 (MQ=255) gggCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGgatgat > 1:2539039/1‑150 (MQ=255) ggCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGTACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGAtt > 2:4269871/1‑150 (MQ=255) tAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAg < 2:3622225/150‑1 (MQ=255) aTTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGgt < 2:369165/150‑1 (MQ=255) cAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGctgac > 1:3673452/1‑88 (MQ=255) cAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGgtctg > 1:2257811/1‑150 (MQ=255) aaCGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGAt > 2:781458/1‑131 (MQ=255) aaCGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGAt < 1:781458/131‑1 (MQ=255) aaCGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGgtctgt < 2:796133/150‑1 (MQ=255) aaCGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGgtctgt > 1:1227437/1‑150 (MQ=255) aCGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGgtctgtc > 1:1660093/1‑150 (MQ=255) gCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGc < 2:4776405/150‑1 (MQ=255) gCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGc < 1:5395932/150‑1 (MQ=255) gCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGc < 1:5395948/150‑1 (MQ=255) ccGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCgg > 1:4787875/1‑150 (MQ=255) tttCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGc > 2:3188980/1‑150 (MQ=255) tttCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGc > 1:4313856/1‑150 (MQ=255) tttCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGc > 2:435811/1‑150 (MQ=255) ttCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCg < 1:4506028/150‑1 (MQ=255) cgccggTATGTCCTCAGAAGCGGAATGCTCCCCTCGCAGTGTGCAGAATTTGCACATGACTCGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGaaa < 2:4174077/146‑1 (MQ=255) cgAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGaaa < 1:3311936/150‑1 (MQ=255) gTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCAt > 1:3349395/1‑150 (MQ=255) aTGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCt > 1:3260510/1‑150 (MQ=255) tGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTa > 1:923379/1‑150 (MQ=255) tcatcaGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAgg > 2:5049618/1‑150 (MQ=255) tcatcaGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAgg > 2:4066500/1‑150 (MQ=255) aGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTctct > 1:639704/1‑150 (MQ=255) gAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcagca > 2:1268841/1‑72 (MQ=255) aaGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCttt < 1:2430903/150‑1 (MQ=255) aGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTc < 2:3574960/150‑1 (MQ=255) tCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCgg > 1:3483872/1‑150 (MQ=255) tCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCgg < 2:779365/150‑1 (MQ=255) tCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCgg > 2:2586251/1‑150 (MQ=255) tCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCgg > 1:110616/1‑150 (MQ=255) cccTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCt < 2:1816012/127‑1 (MQ=255) cccTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCt > 1:1816012/1‑127 (MQ=255) ccTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCt < 2:3152287/150‑1 (MQ=255) tAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTcc > 2:3496866/1‑150 (MQ=255) taatgtgCAAATTCTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTccgcc > 1:4671201/4‑150 (MQ=255) tgCAGAATTTGCACATTACGAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGaa < 2:5056918/150‑1 (MQ=255) aGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGAAggg > 2:2960911/1‑150 (MQ=255) aTTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGAAGGGccc > 1:864902/1‑150 (MQ=255) aTTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGAAGGGccc > 2:2326522/1‑150 (MQ=255) | GTTCCCACCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGAAGGGCCC > NC_002947/2194906‑2195204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |