| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,195,057 | T→C | 7.7% | intergenic (+186/‑237) | PP_1938 → / → PP_1939 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,195,057 | 0 | T | C | 7.7% | 428.0 / 17.4 | 142 | intergenic (+186/‑237) | PP_1938/PP_1939 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (80/51); new base C (4/7); total (84/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.93e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
TCCCACCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGAAGGGCCC > NC_002947/2194908‑2195204 | tCCCACCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTGTGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAAtt < 1:4908839/150‑1 (MQ=255)tCCCACCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAAtt < 1:223798/150‑1 (MQ=255) cACCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGc > 2:4745411/1‑150 (MQ=255) aCCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGca > 1:1833922/1‑150 (MQ=255) cTAGGTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGcaca > 1:1453328/1‑150 (MQ=255) tAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGACTTTGCACAt > 2:4430087/1‑150 (MQ=255) tAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAAATTCTGcacac < 1:122669/150‑2 (MQ=255) gtgaCCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGACCAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACAttc < 2:2735317/147‑2 (MQ=255) gTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAAATTCTGcacactg < 1:5418442/150‑4 (MQ=255) gTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAAATTCTGcacactg < 1:980480/150‑4 (MQ=255) aCCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTa < 2:439615/150‑1 (MQ=255) ccAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGCGTGCAGAATTTGCACATTACTAg > 2:2575059/1‑150 (MQ=255) cAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAgg > 1:3152287/1‑150 (MQ=255) aGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAggg > 1:2008051/1‑150 (MQ=255) ccGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGTAATGTGCAAATTCTGCACACTGCTAggggag < 2:1003643/150‑3 (MQ=38) gACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGctga > 1:4502405/1‑150 (MQ=255) gCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAAt > 2:4506028/1‑150 (MQ=255) cTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATa < 1:468464/150‑1 (MQ=255) tGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAg > 1:621801/1‑150 (MQ=255) tGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAg < 2:4518912/150‑1 (MQ=255) aTTCTTTCTTCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCa < 2:3525617/150‑1 (MQ=255) ttctttctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAg < 1:2189180/150‑1 (MQ=255) ttctttctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAg > 2:1087954/1‑150 (MQ=255) ctttctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTc < 2:608170/150‑1 (MQ=255) tttctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTca > 1:1831352/1‑150 (MQ=255) ttctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcag > 1:5431207/1‑150 (MQ=255) ttctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcag > 1:3569383/1‑150 (MQ=255) ctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCACCGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcagca < 1:697595/150‑1 (MQ=255) ctGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcagca < 1:241640/150‑1 (MQ=255) tGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcagcag > 2:3865654/1‑150 (MQ=255) tGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcagcag > 1:2680817/1‑150 (MQ=255) gCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGa > 2:2587215/1‑150 (MQ=255) gagcggagcgAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGAct > 2:547928/1‑150 (MQ=255) gagcggagcgAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGAct > 2:4936543/1‑150 (MQ=255) gagcggagcgAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGAct > 2:548221/1‑150 (MQ=255) gcggagcgAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGActtc < 1:3854077/150‑1 (MQ=255) gagcgAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAgg < 1:2732434/117‑1 (MQ=255) gagcgAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAgg > 2:2732434/1‑117 (MQ=255) aCAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGTAATGTGCAAATTCTGCACACTGCTAggg > 2:4929776/1‑112 (MQ=37) aCAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGTAATGTGCAAATTCTGCACACTGCTAggg < 1:4929776/112‑1 (MQ=37) cTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCgg > 1:516762/1‑150 (MQ=255) tCCCCGTACCTGAGTCGGACTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGa < 2:283244/150‑1 (MQ=255) cccGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAgt < 2:4094292/150‑1 (MQ=255) cccGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAgt < 1:382295/150‑1 (MQ=255) cccGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAgt < 1:220864/150‑1 (MQ=255) ccGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAgtg < 1:3095572/150‑1 (MQ=255) cGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAgtgt < 1:1805201/150‑1 (MQ=255) cGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAgtgt > 1:1617908/1‑150 (MQ=255) ccTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAgtgt > 2:1212566/1‑146 (MQ=255) aGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGga < 2:255241/150‑1 (MQ=255) aGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGga < 1:1120996/150‑1 (MQ=255) aGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGga < 1:1120987/150‑1 (MQ=255) gggCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGgatgat > 1:2539039/1‑150 (MQ=255) ggCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGTACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGAtt > 2:4269871/1‑150 (MQ=255) gCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTc > 1:2073692/1‑150 (MQ=255) tAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAg < 2:3622225/150‑1 (MQ=255) aTTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGgt < 2:369165/150‑1 (MQ=255) cAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGctgac > 1:3673452/1‑88 (MQ=255) aaCGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGAt > 2:781458/1‑131 (MQ=255) aaCGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGAt < 1:781458/131‑1 (MQ=255) aaCGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGgtctgt < 2:796133/150‑1 (MQ=255) aaCGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGgtctgt > 1:1227437/1‑150 (MQ=255) gCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGc < 1:5395932/150‑1 (MQ=255) gCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGc < 2:4776405/150‑1 (MQ=255) gACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGAt < 1:1520306/150‑1 (MQ=255) tttCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGc > 1:2504891/1‑150 (MQ=255) tttCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGc > 2:435811/1‑150 (MQ=255) tttCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGc > 2:3188956/1‑150 (MQ=255) ttCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCg < 1:4506028/150‑1 (MQ=255) cgccggTATGTCCTCAGAAGCGGAATGCTCCCCTCGCAGTGTGCAGAATTTGCACATGACTCGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGaaa < 2:4174077/146‑1 (MQ=255) gTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCAt > 1:3349395/1‑150 (MQ=255) tATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATc < 2:1831352/150‑1 (MQ=255) aTGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCt > 1:3260510/1‑150 (MQ=255) tcatcaGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAgg > 2:5049618/1‑150 (MQ=255) tcatcaGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAgg > 2:4066500/1‑150 (MQ=255) atcaGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGAtt > 1:55004/1‑113 (MQ=255) tcaGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGtct > 1:3389052/1‑150 (MQ=255) aGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTctct > 1:5164821/1‑150 (MQ=255) gAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcagca < 1:1268841/72‑1 (MQ=255) gAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTcagca > 2:1268841/1‑72 (MQ=255) aaGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCttt < 1:2430903/150‑1 (MQ=255) aGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTc < 2:3574960/150‑1 (MQ=255) tCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCgg > 1:3483872/1‑150 (MQ=255) tCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCgg < 2:779365/150‑1 (MQ=255) tCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCgg > 1:110616/1‑150 (MQ=255) tCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCgg > 2:2586251/1‑150 (MQ=255) cccTAGTAATGTGCAAATTCTGCACACTGCTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGcc > 1:3275141/1‑150 (MQ=39) cccTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCt < 2:1816012/127‑1 (MQ=255) cccTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCt > 1:1816012/1‑127 (MQ=255) ccTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCt < 2:3152287/150‑1 (MQ=255) cTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTATCTTTCACTACCGCGGCCTc > 2:1287563/1‑150 (MQ=255) tAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTcc > 2:3496866/1‑150 (MQ=255) tAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTcc > 2:3036998/1‑150 (MQ=255) taatgtgCAAATTCTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTccgcc > 1:4671223/4‑150 (MQ=255) tgCAGAATTTGCACATTACGAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGaa < 2:5056918/150‑1 (MQ=255) aGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGAAggg > 1:519940/1‑150 (MQ=255) aGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGAAggg > 2:2960911/1‑150 (MQ=255) aTTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGAAGGGccc > 2:2326522/1‑150 (MQ=255) aTTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGAAGGGccc > 1:864902/1‑150 (MQ=255) aTTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGAAGGGccc > 2:2326944/1‑150 (MQ=255) | TCCCACCTAGTTACCAGGCCGACAGGGCTGGATTCTTTCTGCGAGCGGAGCGAACAGCTCCCCGTACCTGAGTCGGGCTAATTCAACGGCCCGACTTTCGCGAAGGTATGTCATCAGAAGCGGAATGCTCCCCTAGCAGTGTGCAGAATTTGCACATTACTAGGGGCTGACTGAATAGGCAGTCAGCAGACTTCTTACTGGTCGCGGAGTGTGATCAGGATGATTCAGGTCTGTCTGCGGATTGCGGAAAGTCATCTAGGTCTCTTTCACTACCGCGGCCTCCGCCGCGAAGGGCCC > NC_002947/2194908‑2195204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |