| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,198,287 | C→T | 5.7% | intergenic (‑658/+65) | PP_1940 ← / ← PP_1941 | methyl‑accepting chemotaxis transducer/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,198,287 | 0 | C | T | 5.7% | 490.1 / 12.2 | 158 | intergenic (‑658/+65) | PP_1940/PP_1941 | methyl‑accepting chemotaxis transducer/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (68/81); new base T (5/4); total (73/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
Only 100 of 159 total aligned reads displayed.
GCGGAGTAGGTGACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACA > NC_002947/2198138‑2198434 | gCGGAGTAGGTGACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATcc > 2:5324914/1‑150 (MQ=255) aGTAGGTGACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCa < 1:995140/150‑1 (MQ=255) aGTAGGTGACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCa < 1:2634615/150‑1 (MQ=255) aGTAGGTGACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCa < 2:688210/150‑1 (MQ=255) gACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCgctgc < 1:3790795/150‑1 (MQ=255) gACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCgctgc < 1:3790956/150‑1 (MQ=255) aCCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCgctgct > 2:3942096/1‑150 (MQ=255) aCCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCgctgct > 2:3942115/1‑150 (MQ=255) cccTGGTCGGTGGGGACCTGAATCATGCAAGGATGGAGGCCCATCTGCTATAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCtgctgc < 2:2739556/150‑1 (MQ=255) cccAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCtgctgc > 2:3808077/1‑150 (MQ=255) cccAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCtgctgc < 2:1424204/150‑1 (MQ=255) cccAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCtgctgc > 2:1187570/1‑150 (MQ=255) cAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCga < 2:3165146/150‑1 (MQ=255) aGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCAGCGCTGCggg < 1:1763956/150‑3 (MQ=255) ggTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCTCGCAGCAGCGCTGCggga < 1:4586741/150‑1 (MQ=255) ggTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTaa > 1:3566123/1‑150 (MQ=255) ggTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTaa < 1:307784/150‑1 (MQ=255) ggTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTaa < 1:307999/150‑1 (MQ=255) gTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAAc < 1:1715851/150‑1 (MQ=255) ggggAACTGACTCATCCCAGGCGGGAGGCCCATCTGCTACAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTGACTATCAGACATCCTGTGCGCCTTGAGTAGGCAAGGCAATGAAATCTCGCAGCAGCGCTGCGGGAtttcatt < 2:3783407/150‑6 (MQ=255) ggAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCTCGCAGCAGCGCTGCGGGAtttcattgc < 1:111906/150‑8 (MQ=255) aaTCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATAAACCAACCGAgatc > 2:3591052/1‑147 (MQ=255) tcatcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTcc < 1:83712/150‑1 (MQ=255) catcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCa < 2:4429853/150‑1 (MQ=255) atcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAg < 1:108001/150‑1 (MQ=255) tcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGAtttcatt > 1:4283125/1‑131 (MQ=255) aaGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGccc > 1:4333431/1‑150 (MQ=255) aaGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGccc > 1:1550076/1‑150 (MQ=255) aTGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGtt < 1:2610058/150‑1 (MQ=255) tgacgcacATCTTCTAAAGCTCATTGATCTATACAGCAGTGATCTGAACGACTTTACTATCAGACATCCTGTTCGACTTGATTAGTCAATTCAATGAAATACCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTgg < 2:3408747/143‑1 (MQ=255) ccATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAg > 1:681561/1‑150 (MQ=255) cATCTGCTAAAGCGCCTGGAACGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAgg < 1:1121752/150‑1 (MQ=255) cATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAgg > 1:3998448/1‑150 (MQ=255) cATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAgg < 1:1241262/150‑1 (MQ=255) cTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCa > 2:4366841/1‑150 (MQ=255) tGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCaa > 2:2956835/1‑150 (MQ=255) tGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCaa < 2:2098122/150‑1 (MQ=255) gCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAAt < 1:4753374/150‑1 (MQ=255) gCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAAt < 2:4246545/150‑1 (MQ=255) tAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCACGGCAATGAAATCCCGCAGCGCTGCTGCGAGGTTAACCTGCCGAGCGTCGAGGCCCCGTTGGCACTAGGGccgtgg > 1:5320630/1‑145 (MQ=255) tAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATga < 2:3624950/150‑1 (MQ=255) tAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATga > 1:2792527/1‑150 (MQ=255) tAAAGCGCATGGATCGCGTCAGCAGTGATCGGAACGCCTTTACTCTCAGACCTCCTGTGCGCCTTGAGTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATga < 2:849148/150‑1 (MQ=255) aaaGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATgag > 1:4237921/1‑150 (MQ=255) gcctGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTaa < 1:5087014/147‑1 (MQ=255) gcATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTaa < 2:4539932/150‑1 (MQ=255) gcATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTaa < 1:5333072/150‑1 (MQ=255) gcATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTaa > 1:5006072/1‑150 (MQ=255) aTGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGa > 2:1077057/1‑150 (MQ=255) aTCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTaa < 2:2920068/144‑1 (MQ=255) aTCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGACCCGTTGGCACTAGGGCAATGAGACTaa > 1:2920068/1‑144 (MQ=255) gCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActct < 2:3731036/150‑1 (MQ=255) cTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctc < 1:3490949/150‑1 (MQ=255) cTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctc < 2:1651319/150‑1 (MQ=255) ttCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctct > 1:3669790/1‑150 (MQ=255) ttCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctct < 2:500468/150‑1 (MQ=255) tCAGCAGTGATCGGAACGCCTTTACTATCAGACTTCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCtt < 1:5193891/150‑1 (MQ=255) tCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCtt > 1:5355092/1‑150 (MQ=255) cagTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGAcc > 1:3985028/1‑150 (MQ=255) agTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCa > 2:5267370/1‑150 (MQ=255) agTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCa > 1:1274152/1‑150 (MQ=255) agTGATCGGAACGCCTTTACTATCAGACATCCCGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCa > 2:413213/1‑150 (MQ=255) tGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACt > 1:4822792/1‑150 (MQ=255) gATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTg < 1:2044751/150‑1 (MQ=255) aTCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGc > 1:2514654/1‑150 (MQ=255) tCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCt > 2:5195287/1‑150 (MQ=255) ggAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCa > 2:1423730/1‑150 (MQ=255) aCTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGAttt < 1:663785/150‑1 (MQ=255) cTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTc > 1:2540536/1‑150 (MQ=255) tCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctct < 1:4079618/122‑1 (MQ=255) tCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctct > 2:4079618/1‑122 (MQ=255) tCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaaa < 1:3515508/150‑1 (MQ=255) cAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaaaa < 1:5103279/150‑1 (MQ=255) aGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAAc > 2:2011701/1‑150 (MQ=255) aGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAAc > 1:5020458/1‑150 (MQ=255) aCATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCt > 2:1926654/1‑150 (MQ=255) cATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTg < 2:2296301/150‑1 (MQ=255) ccTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTc < 2:69383/70‑1 (MQ=255) cTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAAc > 1:5296149/1‑57 (MQ=255) tgtgCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTcgc > 1:4869571/1‑150 (MQ=255) gtgCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGAGTTCAAAACCTGCTcgcg > 2:5447408/1‑150 (MQ=255) tgCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGa < 1:370064/150‑1 (MQ=255) tgCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGa < 1:4146033/150‑1 (MQ=255) cgcCTTGATTACGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCCAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGt < 2:1457832/150‑1 (MQ=255) ccTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTaa > 2:4677582/1‑150 (MQ=255) tGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAg > 2:3196584/1‑150 (MQ=255) gATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAgg < 1:2064921/150‑1 (MQ=255) ctaatcaaggcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAgggg > 2:3449422/6‑150 (MQ=255) tAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGc < 1:3283416/150‑1 (MQ=255) tAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGc < 1:5250927/150‑1 (MQ=255) ggcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCg > 1:703014/1‑150 (MQ=255) gcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGc > 1:1214303/1‑150 (MQ=255) aaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCTAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCt < 2:3238940/150‑1 (MQ=255) aTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTa < 2:2193542/150‑1 (MQ=255) gttaaTCTCGCAGCAGCGCTGCGGGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAg > 2:223499/4‑150 (MQ=255) ttaaTCTCGCAGCAGCGCTGCGGGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGc > 2:4476542/3‑150 (MQ=255) aTCTCGCAGCAGCGCTGCGGGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCcac > 1:2173274/1‑150 (MQ=255) aTCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCcac > 1:632976/1‑150 (MQ=255) tCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCcaca < 2:3323835/150‑1 (MQ=255) tCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCcaca > 1:5218650/1‑150 (MQ=255) | GCGGAGTAGGTGACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACA > NC_002947/2198138‑2198434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |