| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,198,303 | A→G | 5.5% | intergenic (‑674/+49) | PP_1940 ← / ← PP_1941 | methyl‑accepting chemotaxis transducer/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,198,303 | 0 | A | G | 5.5% | 465.4 / 9.8 | 145 | intergenic (‑674/+49) | PP_1940/PP_1941 | methyl‑accepting chemotaxis transducer/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (65/72); new base G (5/3); total (70/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01 | |||||||||||
Only 100 of 151 total aligned reads displayed.
CAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACATCATTAGGACATGCTCG > NC_002947/2198154‑2198451 | cAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCga < 2:3165146/150‑1 (MQ=255)cAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCga < 1:2872251/150‑1 (MQ=255) ggTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCTCGCAGCAGCGCTGCggga < 1:4586741/150‑1 (MQ=255) ggTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCgaga < 1:5393861/150‑1 (MQ=255) cGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCTCGCAGCAGCGCTGCGGGAttt < 2:3899401/150‑2 (MQ=255) ggTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTaa > 1:3566123/1‑150 (MQ=255) ggTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTaa < 1:307999/150‑1 (MQ=255) ggTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTaa < 1:307784/150‑1 (MQ=255) ggAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCTCGCAGCAGCGCTGCGGGAtttcattgc < 1:111906/150‑8 (MQ=255) gatcTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGTCTTCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTTcc < 1:3591052/147‑1 (MQ=255) aCTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGa < 2:1964337/150‑1 (MQ=255) aaTCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATAAACCAACCGAgatc > 2:3591052/1‑147 (MQ=255) atcatcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTc < 1:5124043/150‑1 (MQ=255) catcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCa < 2:4429853/150‑1 (MQ=255) atcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAg < 1:108001/150‑1 (MQ=255) tcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGAtttcatt > 1:4283125/1‑131 (MQ=255) tcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGAtttcatt < 2:4283125/136‑6 (MQ=255) ccAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGc > 1:942711/1‑150 (MQ=255) aaGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGccc > 1:1550076/1‑150 (MQ=255) aTGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGtt < 1:2610058/150‑1 (MQ=255) tgacgcacATCTTCTAAAGCTCATTGATCTATACAGCAGTGATCTGAACGACTTTACTATCAGACATCCTGTTCGACTTGATTAGTCAATTCAATGAAATACCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTgg < 2:3408747/143‑1 (MQ=255) gAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGc < 1:5073956/150‑1 (MQ=255) ccATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAg > 2:583002/1‑150 (MQ=255) cATCTGCTAAAGCGCCTGGAACGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAgg < 1:1121752/150‑1 (MQ=255) cATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAgg < 1:1241262/150‑1 (MQ=255) aTCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCACTGAAATCCCGCAGCGCTGCTGCGAGCTTAACCTACCGAGCGTCCAGGCCCCGGTGGCACTAggg > 1:4682090/1‑150 (MQ=255) tCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGc < 1:5324914/150‑1 (MQ=255) tGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCaa < 2:2098122/150‑1 (MQ=255) tGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCaa > 2:2956835/1‑150 (MQ=255) tAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATga > 1:2792527/1‑150 (MQ=255) tAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATga < 2:2345684/150‑1 (MQ=255) tAAAGCGCATGGATCGCGTCAGCAGTGATCGGAACGCCTTTACTCTCAGACCTCCTGTGCGCCTTGAGTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATga < 2:849148/150‑1 (MQ=255) aaaGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATgag > 1:4237921/1‑150 (MQ=255) aaaGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATgag > 1:212319/1‑150 (MQ=255) cgcATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTa < 1:4945359/150‑1 (MQ=255) gcctGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTaa < 1:5087014/147‑1 (MQ=255) gcATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTGTCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTaa < 2:4539867/150‑1 (MQ=255) gcATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTaa > 1:5006072/1‑150 (MQ=255) gcATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTaa < 2:4539932/150‑1 (MQ=255) aTGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGa < 1:1830809/150‑1 (MQ=255) gCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActct < 2:3731036/150‑1 (MQ=255) cTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctc < 2:2237628/150‑1 (MQ=255) cTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctc < 1:3490949/150‑1 (MQ=255) cTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctc < 2:1651319/150‑1 (MQ=255) ttCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctct < 2:500468/150‑1 (MQ=255) tCAGCAGTGATCGGAACGCCTTTACTATCAGACTTCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCtt < 1:5193891/150‑1 (MQ=255) tCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCtt > 1:5355092/1‑150 (MQ=255) gcagTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGAc < 1:5293645/150‑1 (MQ=255) cagTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGAcc > 1:3985028/1‑150 (MQ=255) cagTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGAcc > 1:3985055/1‑150 (MQ=255) agTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCa > 2:5267370/1‑150 (MQ=255) agTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCa > 1:1274152/1‑150 (MQ=255) agTGATCGGAACGCCTTTACTATCAGACATCCCGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCa > 2:413213/1‑150 (MQ=255) tGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACt > 1:4822792/1‑150 (MQ=255) aTCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGc > 1:2514654/1‑150 (MQ=255) ggAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCa > 2:1423730/1‑150 (MQ=255) ggAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCa < 2:3774671/150‑1 (MQ=255) gCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCaa < 2:3593324/150‑1 (MQ=255) cTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACg > 1:2212142/1‑150 (MQ=255) tttACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGa > 1:644295/1‑150 (MQ=255) aCTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGAttt < 1:663785/150‑1 (MQ=255) cTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTc < 2:3190195/150‑1 (MQ=255) tCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctct < 1:4079646/122‑1 (MQ=255) tCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctct < 1:4079618/122‑1 (MQ=255) tCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctct > 2:4079646/1‑122 (MQ=255) tCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaaa > 1:5228343/1‑150 (MQ=255) tCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaaa < 1:3515508/150‑1 (MQ=255) aGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAAc < 2:3998448/150‑1 (MQ=255) aCATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCt > 1:3714411/1‑150 (MQ=255) aCATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCt > 2:1926654/1‑150 (MQ=255) tCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCt > 2:3378030/1‑150 (MQ=255) ccTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTc < 2:69383/70‑1 (MQ=255) ccTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTc > 1:69383/1‑70 (MQ=255) ccTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTc > 1:4268498/1‑150 (MQ=255) cTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAAc < 2:5296149/57‑1 (MQ=255) cTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAAc > 1:5296149/1‑57 (MQ=255) tgCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGTAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGa < 1:4313326/150‑1 (MQ=255) tgCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGa < 1:370064/150‑1 (MQ=255) gcgcCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAg > 2:4679425/1‑150 (MQ=255) cgcCTTGATTACGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCCAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGt < 2:1457832/150‑1 (MQ=255) cTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAAt > 2:1347720/1‑150 (MQ=255) gATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAgg < 1:2064921/150‑1 (MQ=255) tAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGc < 1:1637789/150‑1 (MQ=255) tAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGc < 1:4855553/150‑1 (MQ=255) tAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGc < 1:3283416/150‑1 (MQ=255) gcaaggcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGa > 2:1042239/1‑150 (MQ=255) gcaaggcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGa < 1:2541510/150‑1 (MQ=255) aaggcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATc > 2:2168493/1‑150 (MQ=255) ggcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCg > 1:703014/1‑150 (MQ=255) gcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGc > 1:1214303/1‑150 (MQ=255) aaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCTAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCt < 2:3238940/150‑1 (MQ=255) aaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCt < 2:3238937/150‑1 (MQ=255) gttaaTCTCGCAGCAGCGCTGCGGGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAg > 2:223499/4‑150 (MQ=255) gttaaTCTCGCAGCAGCGCTGCGGGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAg > 2:4451620/4‑150 (MQ=255) tCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCcaca > 1:5218650/1‑150 (MQ=255) gCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAATCCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCAcatcat > 2:2605661/1‑150 (MQ=255) aGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACATCATTa < 2:4333431/150‑1 (MQ=255) gcgcTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACATCATTAg < 1:2011701/150‑1 (MQ=255) tgcGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACATCATTAGGACATGc > 1:2936160/1‑150 (MQ=255) gagaTTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACATCATTAGGACATGCTCg < 2:3104561/150‑1 (MQ=255) | CAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACATCATTAGGACATGCTCG > NC_002947/2198154‑2198451 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |