Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 161,733 A→C 17.0% intergenic (‑228/+18) PP_0152 ← / ← PP_0153 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947161,7330AC17.0% 412.7 / 19.0 176intergenic (‑228/+18)PP_0152/PP_0153hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (96/44);  new base C (3/32);  total (99/77)
Fisher's exact test for biased strand distribution p-value = 5.45e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 178 total aligned reads displayed.

TGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGGCGCTGCCACAGCAGCAGGGT  >  NC_002947/161584‑161882
                                                                                                                                                       |                                                                                                                                                     
      gCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGACGCCGGc                                                                                                                                                 <  2:95356/150‑1 (MQ=255)
        cAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCaa                                                                                                                                               >  1:2542215/1‑150 (MQ=255)
           aCAACTGTTAAGGCGAATTTTAATTTTTGTAATACTGTAGTGGTCGCAATCTGATGCACGCGACTGCGCGTCTGTCGGGCAATAAAATTCCCGCTGCTGTCAGCTGCATCGG‑G‑TTTGTGAAATTCACGGTGCCGGGGAAGCGGGCAAGcc                                                                                                                                            >  2:4025988/1‑150 (MQ=255)
                  ttAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCt                                                                                                                                     >  2:5233331/1‑150 (MQ=255)
                       gCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCCACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAgcg                                                                                                                                >  2:3601525/1‑150 (MQ=255)
                       gCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAgcg                                                                                                                                >  2:4152710/1‑150 (MQ=255)
                       gCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAgcg                                                                                                                                >  1:499144/1‑150 (MQ=255)
                       gCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAgcg                                                                                                                                >  2:4839766/1‑150 (MQ=255)
                            ttttaattttTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGa                                                                                                                           >  2:268475/1‑150 (MQ=255)
                             tttaattttTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGaa                                                                                                                          >  1:873978/1‑150 (MQ=255)
                             tttaattttTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGaa                                                                                                                          >  1:5060432/1‑150 (MQ=255)
                              ttatttttTGTAAAACTGTACTGGACGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCGGCAGTCACCTGCAACGT‑G‑TTTGAGAAATTCCCGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGaaa                                                                                                                         <  2:1632464/150‑1 (MQ=255)
                              ttaattttTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGAAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAACTACACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGaaa                                                                                                                         <  2:1790643/150‑1 (MQ=255)
                                 attttTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGc                                                                                                                      >  2:3953273/1‑150 (MQ=255)
                                  tttttGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCt                                                                                                                     >  2:3231849/1‑150 (MQ=255)
                                  tttttGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCt                                                                                                                     >  2:2964995/1‑150 (MQ=255)
                                  tttttGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCt                                                                                                                     >  1:4068840/1‑150 (MQ=255)
                                    tttGTAAAACTGTAGTGGGCGCAATCTTACGCCCGCGAGTGCGCGTCTCTCGGGAAATAAAAAACCCGCTGCATCCACCTGCAACGG‑T‑TTTCACAAATACACGGTGCCGGCGACGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTg                                                                                                                   <  2:129972/150‑1 (MQ=255)
                                     ttGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGc                                                                                                                  >  1:53536/1‑150 (MQ=255)
                                     ttGTAAAACTGTACTGGTCGCAATCAGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGc                                                                                                                  >  1:53462/1‑150 (MQ=255)
                                      tGTAAAATTGTACTGTTCCAAATCTGACGCAGGCGACTGCGCTTCTCTCGGGAAATAAAAAACCGGCTGCAGTCACCTGCAACGG‑T‑TTTGATAAATTCCGGGTGCCGGCGACGCGGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCt                                                                                                                 <  1:3596386/150‑1 (MQ=255)
                                       gaaaaaGTGTAGTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTGGGGCAATAAAAACCCCGCGGCTGCCCCGTGCAAGGG‑G‑TTTGAGAAATTCAGGGGGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTc                                                                                                                <  2:2953487/148‑1 (MQ=255)
                                        tAAAACTTTACGGTTCGCATTCTTATGCACGCGACTGGGGTTCTCTGGGGCAATAAAAACCCCGCTGCAGTCACCTGCAACGG‑T‑TTTGAGAATTGCCCGGGGCCGGCGACGCGGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCa                                                                                                               <  2:1572380/150‑1 (MQ=255)
                                        tAAAACTGTCGGGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTGGGGCAATAAAAAACCCGCGGCTGTCACCTGCAACGG‑G‑TTTGAGAATTGCCCGGTGCGGGCGACGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCa                                                                                                               <  2:2813353/150‑1 (MQ=255)
                                           aaCTTTAGTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTGGGGCAATAAAAAACCCGCTGCAGTCACCTGCACCGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGct                                                                                                            <  2:3821240/150‑1 (MQ=255)
                                               gTAGTGGTCGAATTCTTACGCCCGCGACTGCGCGTCTCTGGGCCAAAAAAAAACCCGCGGCAGTCACCTGCACCGG‑T‑TTTGAGAAATCCCGGGGGCCGGCTACGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTc                                                                                                        <  1:4416372/150‑1 (MQ=255)
                                               gTACTGGCCCCAATCGCACGCCCGCGACGGCGCGTCCCGCGGCCAAAAAAAAACCCGCTGCAGCCACCTGCAAGGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGCCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTc                                                                                                        <  1:4417114/150‑1 (MQ=255)
                                                   tGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTaa                                                                                                    >  1:4363444/1‑150 (MQ=255)
                                                   tGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTaa                                                                                                    >  1:847319/1‑150 (MQ=255)
                                                   tGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTaa                                                                                                    >  1:1042774/1‑150 (MQ=255)
                                                     gTCGCAATCTGTAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTGCGTAACg                                                                                                  >  2:2901083/1‑150 (MQ=255)
                                                     gTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACg                                                                                                  >  1:2099072/1‑150 (MQ=255)
                                                         cAATCTGAAGCACGCGACTGCGCGTCTCTCGGGAAATAAAAAACCCGCTGCCGTCACCTGCAACGG‑G‑TTGGAGAAATTCACGGTGCCGGCGACGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGc                                                                                              <  2:5261396/150‑1 (MQ=255)
                                                            tCTGACGCACGCGACGGCGCGTCCCGCGGGCAATAAAAAACCCGCTGCAGCCACCGGCACCGG‑G‑TTTGAGAAATCCCCGGGGCCGGCGACGCGGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGAc                                                                                           <  2:1903973/150‑1 (MQ=255)
                                                            tCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCg                                                                                                                                                   >  2:5023923/1‑94 (MQ=255)
                                                            tCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGAc                                                                                           >  2:5098909/1‑150 (MQ=255)
                                                                aaGCCCGCGACTGCGCGTCTCTCGGGAAATAAAAAACCCGCTGCAGTCACCTGCACGGG‑T‑TTTGATAAATTCAGGGTGCCGGCGAAGCCGCCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGc                                                                                       <  1:3146466/150‑1 (MQ=255)
                                                                aaGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGc                                                                                       >  1:5112726/1‑150 (MQ=255)
                                                                   cACGCGACTGCGCGTCTCTCGGGCAATAATAATCCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACTCTGAGACTCGCTGa                                                                                    >  1:1932539/1‑150 (MQ=255)
                                                                   cACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGa                                                                                    <  2:4926449/150‑1 (MQ=255)
                                                                    aCGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGAt                                                                                   >  1:3059994/1‑150 (MQ=255)
                                                                    aCGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGAt                                                                                   >  1:2936694/1‑150 (MQ=255)
                                                                    aCGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGAt                                                                                   >  1:205962/1‑150 (MQ=255)
                                                                        gacggggcgTATCTCGGCAAAAAAAAACCCCGCGGCCTCCACCT‑CAATGG‑GTTTTGACAAATTCCCGGGGCGGGCGACGCCGCCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCg                                                                               <  1:1100603/144‑1 (MQ=255)
                                                                                  ctctcGGGCAATAAAAAACCCGCTGCAGTCACGTGCACCGG‑T‑TTTGAGAAATTCCCGGTGCGGGCGACGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCca                                                                     <  2:3453822/150‑1 (MQ=255)
                                                                                  ctctcGGGCAATAAAAAACCCGCTGCAGTCACCTGCACGGG‑T‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCca                                                                     <  1:2229744/150‑1 (MQ=255)
                                                                                  ctctcGGGCAATAAAAAACCCGCTGCAGTCACCTGCACCGG‑G‑TTTGAGAAATTCAGGGTGCCGGCGACGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGTGACTCGCTGATACCGGCGTCTGCca                                                                     <  1:5420482/150‑1 (MQ=255)
                                                                                   tctcGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTTAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCcag                                                                    <  2:2657004/150‑1 (MQ=255)
                                                                                   tctcGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCcag                                                                    >  1:2306004/1‑150 (MQ=255)
                                                                                     tcGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCcagca                                                                  >  1:754487/1‑150 (MQ=255)
                                                                                     tcGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCcagca                                                                  >  1:754329/1‑150 (MQ=255)
                                                                                         gaaaTAAAAAACCCGCTGCAGTCACCTGAAAGGG‑G‑TTTGAGAATTTCAGGGTGCGGGCGACGCGGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCg                                                              <  2:1038891/148‑1 (MQ=255)
                                                                                         gCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCg                                                              >  1:2762022/1‑150 (MQ=255)
                                                                                          cAATAAAAACCCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAAGCCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCgg                                                             <  2:5290762/150‑1 (MQ=255)
                                                                                          cAATAAAAAACCCGCTGCAGTCACCTGCAAGGG‑T‑TTTGATAAATTCAGGGTGCGGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCgg                                                             <  1:3080526/150‑1 (MQ=255)
                                                                                          cAAAAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCCCGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCgg                                                             <  2:1022596/150‑1 (MQ=255)
                                                                                           aaTAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCggg                                                            >  2:1090771/1‑150 (MQ=255)
                                                                                           aaTAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCGTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCggg                                                            >  2:1626849/1‑150 (MQ=255)
                                                                                            aTAAAAACCCCGCGGCAGCCACCGGCAAGGG‑G‑TTTGAGAAATCCCCGGGGCCGGCGACGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGa                                                           <  2:705993/150‑1 (MQ=255)
                                                                                            aTAAAAAACCCGCTGCAGTCACCTTCAACGG‑G‑TTTTATAAATTCACGGTGCCGGCTAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGa                                                           <  2:3853664/150‑1 (MQ=255)
                                                                                            aTAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAATTTCCCGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGa                                                           <  1:4490922/150‑1 (MQ=255)
                                                                                            aTAAAAAACCCGCGGCTCTCA‑CTTCAACGGTT‑TTTGATAATTTCGGGGTGCCGGCCACGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGa                                                           <  1:4219615/150‑1 (MQ=255)
                                                                                             ttaaaaaCCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAg                                                          >  2:1215880/3‑150 (MQ=255)
                                                                                             tAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAg                                                          >  1:908744/1‑150 (MQ=255)
                                                                                             tAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAg                                                          <  2:3152014/150‑1 (MQ=255)
                                                                                             tAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAg                                                          >  2:1241264/1‑150 (MQ=255)
                                                                                               aaaaaCCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAgag                                                        >  1:3853664/1‑148 (MQ=255)
                                                                                               aaaaaCCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTAACTGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTAAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTCCCAGCAGGCGGGAGTc                                                        >  1:3761738/1‑150 (MQ=255)
                                                                                                aaaaCCCGCTGCAGTCACCTGAAACGT‑T‑TTTCACAAATTCACGGTCCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGAAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGAcc                                                       <  2:873978/150‑1 (MQ=255)
                                                                                                 aaaCCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCa                                                      >  1:1549827/1‑150 (MQ=255)
                                                                                                   ccccGCGCCAGACACCTGCAAGGT‑T‑TTTTATAAATCCCCGGTGCCGGCTACGCCGCCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAgg                                                    <  1:4617690/149‑1 (MQ=255)
                                                                                                   aCCCGCTGCAGTCACCTGCAAGGG‑T‑TTTGAGAAATTCAGGGTGCGGGCTACGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAgg                                                    <  1:2194948/150‑1 (MQ=255)
                                                                                                     ccGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCg                                                  >  2:2582000/1‑150 (MQ=255)
                                                                                                      ccatccAGACACCTGAAACGT‑T‑TTTCATAAATACACGCTGCCGGCAAACCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGa                                                 <  2:205962/145‑1 (MQ=255)
                                                                                                      cGCTGCAGTCACCTGCAACGG‑G‑TTGGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGa                                                 <  2:1755992/150‑1 (MQ=255)
                                                                                                       gCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAg                                                >  2:3123629/1‑150 (MQ=255)
                                                                                                            aGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGt                                           >  1:1400014/1‑150 (MQ=255)
                                                                                                              gtgacTGCAGCGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTg                                         >  1:5393584/5‑150 (MQ=255)
                                                                                                                  cTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTgacga                                     >  1:619971/1‑150 (MQ=255)
                                                                                                                  cTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTgacga                                     >  2:1620941/1‑150 (MQ=255)
                                                                                                                        cGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTg                               >  1:3669197/1‑150 (MQ=255)
                                                                                                                        cGG‑G‑TTTGAGAAATCCCCGGTGCCGGCTACGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTg                               <  2:1372709/150‑1 (MQ=255)
                                                                                                                         gg‑g‑TTTGATAAAGTCCCGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTgg                              <  2:1504557/150‑1 (MQ=255)
                                                                                                                         gg‑g‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCcagcag                                                                 >  1:4962432/1‑115 (MQ=255)
                                                                                                                            g‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTc                            >  1:3087165/1‑150 (MQ=255)
                                                                                                                                tGAGAATTTCAGGGTGCCGGCGACGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACAGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATa                         <  2:499144/150‑1 (MQ=255)
                                                                                                                                  agaAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACg                       >  1:2580784/1‑150 (MQ=255)
                                                                                                                                    aaaTTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGgc                     >  1:1658183/1‑150 (MQ=255)
                                                                                                                                      aTTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGgcgc                   >  2:3302363/1‑150 (MQ=255)
                                                                                                                                      aTTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGgcgc                   >  2:3135153/1‑150 (MQ=255)
                                                                                                                                       ttccgggTGCCGGCGACGCGGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGGCGCt                  <  1:4152710/145‑1 (MQ=255)
                                                                                                                                         cACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGGCGCTGc                >  1:242356/1‑150 (MQ=255)
                                                                                                                                         cACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGGCGCTGc                <  2:5060448/150‑1 (MQ=255)
                                                                                                                                             ttGCCGGCTTCGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGGCGCTGCcacc            >  2:18390/2‑149 (MQ=255)
                                                                                                                                              ggcgggCGACGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGGCGCTGCCAcag           <  1:4839766/146‑1 (MQ=255)
                                                                                                                                                ccGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGGCGCTGCCAcagca         >  2:4546841/1‑150 (MQ=255)
                                                                                                                                                 cGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGGCGCt                  <  1:1228491/140‑1 (MQ=255)
                                                                                                                                                   gCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGGCGCTGCCAcagcagca      >  1:4305387/1‑150 (MQ=255)
                                                                                                                                                     gAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGGCGCTGCCAcagcag        <  2:4610199/146‑1 (MQ=255)
                                                                                                                                                     gAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGGCGCTGCCACAGCAGCAgg    >  1:3265375/1‑150 (MQ=255)
                                                                                                                                                       |                                                                                                                                                     
TGCTGTGCCAGACAACTGTTAAGGCGAATTTTAATTTTTGTAAAACTGTACTGGTCGCAATCTGAAGCACGCGACTGCGCGTCTCTCGGGCAATAAAAAACCCGCTGCAGTCACCTGCAACGG‑G‑TTTGAGAAATTCACGGTGCCGGCGAAGCCGGCAAGCCGGGAGCTTAGCGCCAGAAAGGCTTGCTCAGCTCTTCGTAACGCTGCGACTCGCTGATACCGGCGTCTGCCAGCAGGCGGGAGTCCAGGCGAGCCAGTTGACGACGGCTGGTCATACGGCGCTGCCACAGCAGCAGGGT  >  NC_002947/161584‑161882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑