| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,239,643 | C→G | 5.4% | A302A (GCG→GCC) ‡ | PP_1975 ← | EmrB/QacA family drug resistance transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,239,643 | 0 | C | G | 5.4% | 557.8 / 16.0 | 167 | A302A (GCG→GCC) ‡ | PP_1975 | EmrB/QacA family drug resistance transporter |
| Reads supporting (aligned to +/- strand): ref base C (79/79); new base G (5/4); total (84/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
Only 100 of 170 total aligned reads displayed.
GCGCCGAACAGGCAAAACCCCAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGAAAACTGCAGGATGACGAAGGT > NC_002947/2239494‑2239792 | gcgcCGAACAGGCAAAACCCCAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTgc < 1:2765581/150‑1 (MQ=255) aaCAGGCAAAACCCCAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAgg < 2:3423576/150‑1 (MQ=255) gCAAAACCCCAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGGCGCAGGTACAg < 2:1214871/150‑1 (MQ=255) gCAAAACCCCAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAg > 1:4845266/1‑150 (MQ=255) cAAAACCCCAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGc < 2:5345367/150‑1 (MQ=255) aaaaCCCCAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCg > 2:4969446/1‑150 (MQ=255) aaaaCCCCAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCg > 2:4148789/1‑150 (MQ=255) aaCCCCAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGt < 1:1826000/150‑1 (MQ=255) aCCCCAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCAGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTa < 1:1337367/150‑1 (MQ=255) ccAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCa < 1:1497484/150‑1 (MQ=255) ccAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCa < 2:1786659/150‑1 (MQ=255) cAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTACAAGGCATTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCag > 1:4651706/1‑150 (MQ=255) cgcgcATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCagata < 2:1846245/150‑1 (MQ=255) gcATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCagatagat < 1:3466042/150‑1 (MQ=255) cATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATc < 2:386558/150‑1 (MQ=255) aTAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCg > 2:2299281/1‑150 (MQ=255) aCCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTACGCCAGGTACAGCGGTAGCAGATAGATCGAg < 2:171132/147‑1 (MQ=255) aCCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTACGCCAGGTACAGCGGTAGCAGATAGATCGAg > 1:171132/1‑147 (MQ=255) ccTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCTGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACCGCGGTAGCAGATAGATCGAGCCGt > 2:3000251/1‑150 (MQ=255) gggCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAg > 2:5288733/1‑150 (MQ=255) gCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGGCGCAGGTACAgg > 2:46815/1‑121 (MQ=255) cACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACAcc < 1:468021/150‑1 (MQ=255) ccTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAg < 1:2103964/139‑1 (MQ=255) ccTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCa > 2:4175665/1‑150 (MQ=255) cTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCAt > 2:4845166/1‑150 (MQ=255) catcaGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGcc > 2:2305218/1‑150 (MQ=255) caGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAg < 2:3895434/150‑1 (MQ=255) tGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTg < 1:2171982/150‑1 (MQ=255) cGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGc < 1:5355320/150‑1 (MQ=255) cGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGc > 1:3813279/1‑150 (MQ=255) aCCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATg > 2:4238949/1‑150 (MQ=255) aGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTc < 1:484262/150‑1 (MQ=255) gCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTgg > 2:1154493/1‑141 (MQ=255) gCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCg > 1:1589570/1‑150 (MQ=255) gCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCg < 1:775085/150‑1 (MQ=255) ggATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACa < 2:632478/150‑1 (MQ=255) cAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGcc > 2:4788731/1‑150 (MQ=255) cAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGcc > 2:1700587/1‑150 (MQ=255) ggAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAg < 2:3732250/76‑1 (MQ=255) ggAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCaa > 2:4851560/1‑150 (MQ=255) gAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCaaa < 1:4131557/150‑1 (MQ=255) gAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCaaa < 1:4845166/150‑1 (MQ=255) cTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCg < 1:2854729/150‑1 (MQ=255) tGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCgg > 2:4183655/1‑150 (MQ=255) tGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCgg > 1:3494653/1‑150 (MQ=255) cGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGtt < 2:2917297/150‑1 (MQ=255) ggAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTg > 1:4112255/1‑150 (MQ=255) tccccATCCACCAGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGa < 2:4529439/148‑1 (MQ=255) tACCCATCCACATGATCACCTCTCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGa < 1:2551931/150‑1 (MQ=255) tACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGa < 2:2596157/150‑1 (MQ=255) tACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGa < 1:2238319/150‑1 (MQ=255) tACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGa < 1:1567008/150‑1 (MQ=255) tACCCATCCACATGATCACCTCGCCAATCTACAAGGCATTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGa < 2:4651706/150‑1 (MQ=255) aCCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAg < 2:2547389/150‑1 (MQ=255) aCCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAg < 2:2547622/150‑1 (MQ=255) ccATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGGCGCAGGTACAg < 1:1633184/64‑1 (MQ=38) ccATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGGCGCAGGTACAg > 2:1633184/1‑64 (MQ=38) ccATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCTCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGa > 2:1771774/1‑150 (MQ=255) ccATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGc > 2:3668013/1‑138 (MQ=255) ccATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGa < 1:4969393/150‑1 (MQ=255) ccATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGa < 1:1203335/150‑1 (MQ=255) ccATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGa < 2:4713041/150‑1 (MQ=255) ccAACCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGa > 1:4468171/1‑150 (MQ=255) tCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATAc > 2:3568836/1‑150 (MQ=255) tCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATAc > 1:3708476/1‑150 (MQ=255) acaTGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCa > 1:258668/1‑150 (MQ=255) acaTGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCa > 1:4749003/1‑150 (MQ=255) acaTGATCACCTCGCCAATCTGAAAGGAGTAGTAACCCTTTACCTGCGCCAGGTACAGCGGTAGCATATAGATCGAGCAGTACAGGACCACAACCATGCCCAGGATGGCGATGCTCGACAGGCCAAAGTTGCGCTTGCCGAGGATACGCa > 1:4748546/1‑150 (MQ=255) gATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGtt > 2:4319246/1‑150 (MQ=255) gATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGtt < 1:556133/150‑1 (MQ=255) gATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGtt > 1:5044060/1‑150 (MQ=255) aCCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATc < 2:2447982/150‑1 (MQ=255) aCCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATc < 2:1618433/150‑1 (MQ=255) gCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCgg < 1:906711/150‑1 (MQ=255) cAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGt > 1:4585075/1‑150 (MQ=255) aaTCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGAt > 1:4460948/1‑96 (MQ=255) aaTCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGAt < 2:4460948/96‑1 (MQ=255) tGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGc > 1:4932595/1‑150 (MQ=255) tGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGc > 1:4363847/1‑150 (MQ=255) tGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGc > 1:5409104/1‑150 (MQ=255) tGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGc > 1:1647417/1‑150 (MQ=255) gCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCt > 2:1477080/1‑150 (MQ=255) caGGCGTTGGAACCCTGGACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACCCCCAGGCCCAGGCTGGCGATGCTCGACAGGCCAACGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTg < 2:2103514/149‑1 (MQ=255) aaGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGTTATCAGATAGATCTAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGACAAAGTTGCGGTTGCAGAGGATACGCATGTTGATCAGCGGGTGAGGCTTg < 1:5180847/150‑1 (MQ=255) aaGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTg < 1:2453247/150‑1 (MQ=255) aaGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTg < 2:2103566/150‑1 (MQ=255) aGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTgg > 2:3277454/1‑150 (MQ=255) ggCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGa < 2:898101/150‑1 (MQ=255) gTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGaaaa < 2:2160016/150‑1 (MQ=255) gTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGaaaa > 1:2270774/1‑150 (MQ=255) tAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGAAAACTGc > 2:3129875/1‑150 (MQ=255) ccTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGAAAACTGCAGGa > 1:2182593/1‑150 (MQ=255) ccTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGAAAACTGCAGGa < 1:1840351/150‑1 (MQ=255) ccTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGACACGCAGGTTGATCAGCGGGTGAGGCTTGGAAAACTGCAGGa > 1:1020108/1‑150 (MQ=255) cTGTACCTGGCGCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGAAAACTGCAGGAt > 1:2959416/1‑150 (MQ=255) cTGTACCTGGCGCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGAAAACTGCAGGAt > 1:2959377/1‑150 (MQ=255) cTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGAAAACTGCAGGATGACGaa > 1:3074390/1‑150 (MQ=255) tGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGAAAACTGCAGGATGACGAAg > 1:5162948/1‑150 (MQ=255) tGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGAAAACTGCAGGATGACGAAg > 1:2186753/1‑150 (MQ=255) cgcCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGAAAACTGCAGGATGACGAAGGt < 1:1093955/150‑1 (MQ=255) | GCGCCGAACAGGCAAAACCCCAGCGCGCATAGTACCTTGGGCGATATCACCTTCATCAGTTGCGGCACCAGCGGGATCAGGAACAGCTGCGGAATACCCATCCACATGATCACCTCGCCAATCTGCAAGGCGTTGTAACCCTGTACCTGCGCCAGGTACAGCGGTAGCAGATAGATCGAGCCGTACAGGCCCACACCCATGCCCAGGCTGGCGATGCTCGACAGGCCAAAGTTGCGGTTGCCGAGGATACGCAGGTTGATCAGCGGGTGAGGCTTGGAAAACTGCAGGATGACGAAGGT > NC_002947/2239494‑2239792 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |