Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,249,777 C→G 6.3% S596T (AGC→ACC) ‡ PP_1983 ← PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,249,7770CG 6.3% 523.7 / 19.1 158S596T (AGC→ACC) ‡PP_1983PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
Reads supporting (aligned to +/- strand):  ref base C (77/71);  new base G (6/4);  total (83/75)
Fisher's exact test for biased strand distribution p-value = 7.49e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01

Only 100 of 168 total aligned reads displayed.

GCGGGCGGTCAGCAGCAGGCAATCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCGGTGATGGTGATGGCGTC  >  NC_002947/2249629‑2249922
                                                                                                                                                    |                                                                                                                                                 
  gggcggTCAGCAGCAGGCAATCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCgcgctgc                                                                                                                                                >  2:2575161/1‑150 (MQ=255)
  gggcggTCAGCAGCAGGCAATCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCgcgctgc                                                                                                                                                >  1:1682047/1‑150 (MQ=255)
       gTCAGCAGCAGGCAATCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCgctgcgctgc                                                                                                                                           <  2:1390469/150‑1 (MQ=255)
        tCAGCAGCAGGCAATCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCAAGCAGCGCAGCGCgctgct                                                                                                                                          >  2:2747648/1‑150 (MQ=255)
         cagcagcagGCAATCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCtt                                                                                                                                         <  2:3928807/150‑1 (MQ=255)
          agcagcagGCAATCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTg                                                                                                                                        >  1:3537331/1‑150 (MQ=255)
           ccagccgGCCAGCCCCGTCGTTGCGGGGGATCGGTGCCCCCGAACCCGCGACCGTGAGGAGATCGCCACGCTTGTTGCGCCCGCGCATCTGGCGGTGGTGTACCCGGCCGCGCTCGCCCAACGCGCCCAGCAGCGCagcgcgctgcgggc                                                                                                                                       <  2:4282548/149‑5 (MQ=255)
            cagcagGCAATCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTgtc                                                                                                                                      <  1:2762500/150‑1 (MQ=255)
              gcagGCAATCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTgtcgg                                                                                                                                    >  1:4344587/1‑149 (MQ=255)
                agGCAATCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGtcgtcg                                                                                                                                  <  1:5158192/150‑1 (MQ=255)
                 ggCAATCCACGTCGTTGAGGGTGATCGGGTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCgg                                                                                                                                 <  1:4616463/150‑1 (MQ=255)
                  gCAATCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTGCCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGc                                                                                                                                >  2:2312404/1‑150 (MQ=255)
                      tCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCtt                                                                                                                                         <  2:2211108/137‑1 (MQ=255)
                      tCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCtt                                                                                                                                         >  1:2211108/1‑137 (MQ=255)
                      tCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAg                                                                                                                            >  1:273421/1‑150 (MQ=255)
                      tCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAg                                                                                                                            >  1:1576410/1‑150 (MQ=255)
                        cACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGAt                                                                                                                          >  2:4729068/1‑150 (MQ=255)
                         aCTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATg                                                                                                                         >  2:3926701/1‑150 (MQ=255)
                          cTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGc                                                                                                                        <  1:4531496/150‑1 (MQ=255)
                           ttCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGcc                                                                                                                       <  2:1576410/150‑1 (MQ=255)
                           ttCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGcc                                                                                                                       >  2:3234486/1‑150 (MQ=255)
                            tCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCg                                                                                                                      >  1:1492968/1‑150 (MQ=255)
                               ttGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCTGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGAtc                                                                                                                   >  1:3849724/1‑150 (MQ=255)
                               ttGAGGGTGATCGGGTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGAtc                                                                                                                   <  2:4695906/150‑1 (MQ=255)
                                tGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGAtct                                                                                                                  <  2:4234071/150‑1 (MQ=255)
                                 gAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGAtctc                                                                                                                 <  2:964100/150‑1 (MQ=255)
                                    ggTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATa                                                                                                              <  2:5222222/150‑1 (MQ=255)
                                     gTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATac                                                                                                             >  2:1929153/1‑150 (MQ=255)
                                     gTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATac                                                                                                             >  2:1929094/1‑150 (MQ=255)
                                       gATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATacac                                                                                                           >  1:2691700/1‑150 (MQ=255)
                                         tCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCg                                                                                                         >  2:2943412/1‑150 (MQ=255)
                                         tCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCAGCGCgctgctgg                                                                                                                                        <  2:2004879/119‑3 (MQ=255)
                                         tCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCAGCGCgctgctgg                                                                                                                                        >  1:2004879/1‑117 (MQ=255)
                                             ttCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGtgtg                                                                                                     <  2:2979323/150‑1 (MQ=255)
                                                 aCCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCg                                                                                                 >  1:696655/1‑150 (MQ=255)
                                                   cGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGAt                                                                                               <  1:3234486/150‑1 (MQ=255)
                                                       aCCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACt                                                                                           >  1:233054/1‑150 (MQ=255)
                                                         cTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTtc                                                                                         >  1:2174630/1‑150 (MQ=255)
                                                         cTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTtc                                                                                         >  1:1055452/1‑150 (MQ=255)
                                                          tCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTtca                                                                                        >  2:692478/1‑150 (MQ=255)
                                                             aCCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTtcatca                                                                                     <  2:1776960/150‑1 (MQ=255)
                                                             aCCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGCGTGGCCGATCACTtcatca                                                                                     <  1:1641337/150‑1 (MQ=255)
                                                                 tGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGc                                                                                 >  1:335550/1‑150 (MQ=255)
                                                                 tGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGc                                                                                 >  1:4177863/1‑150 (MQ=255)
                                                                     gATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTa                                                                             >  2:1930605/1‑150 (MQ=255)
                                                                         tCGCCTCGCTTGTTGCGGCCGAGCATCTCGCGGTGGTGTTCCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCTCTTCATCAGTGCTTTAGCCg                                                                         <  2:329237/150‑1 (MQ=255)
                                                                         tCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCg                                                                         <  1:1127012/150‑1 (MQ=255)
                                                                         tCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCg                                                                         <  1:876555/150‑1 (MQ=255)
                                                                         tCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGAGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCg                                                                         <  1:3608082/150‑1 (MQ=255)
                                                                           gCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCACCTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACCCCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGt                                                                       >  2:3419679/1‑150 (MQ=255)
                                                                            gcACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGAGCAACTCGGCCATCAGCGCGCTGCTCTGCTTGTCGTCGTCCCAGATGCCGTTCTCATACACCGTGTGTCCGATCACTTCTTCAGTGCTGTAGCCGTTc                                                                      <  2:2272669/149‑1 (MQ=255)
                                                                            ccACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTc                                                                      >  1:1251660/1‑150 (MQ=255)
                                                                            ccACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTc                                                                      >  1:4946481/1‑150 (MQ=255)
                                                                            ccACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTc                                                                      >  1:1721361/1‑150 (MQ=255)
                                                                            ccACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTc                                                                      <  2:5002019/150‑1 (MQ=255)
                                                                             cACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCa                                                                     <  2:173706/150‑1 (MQ=255)
                                                                                  ttgttgCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAggcgg                                                                <  1:1891916/150‑1 (MQ=255)
                                                                                  ttgttgCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAggcgg                                                                <  2:4308918/150‑1 (MQ=255)
                                                                                   tgttgCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAggcggc                                                               <  1:2321626/150‑1 (MQ=255)
                                                                                    gttgCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCa                                                              >  2:314968/1‑150 (MQ=255)
                                                                                    gttgCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCa                                                              <  1:4681354/150‑1 (MQ=255)
                                                                                          cccGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGcc                                                        >  2:5427324/1‑150 (MQ=255)
                                                                                           ccGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCcg                                                       >  1:4228419/1‑150 (MQ=255)
                                                                                             gAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCcgtc                                                     >  1:3362333/1‑150 (MQ=255)
                                                                                             gAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCcgtc                                                     <  1:374686/150‑1 (MQ=255)
                                                                                                 aTCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTg                                                 >  2:539066/1‑150 (MQ=255)
                                                                                                   ctcGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGAc                                               <  1:3116150/150‑1 (MQ=255)
                                                                                                    tcGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTgtcgt                                                                                                                                    >  1:3162172/1‑64 (MQ=255)
                                                                                                    tcGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAg                                                          <  1:637269/138‑1 (MQ=255)
                                                                                                    tcGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAg                                                          >  2:637269/1‑138 (MQ=255)
                                                                                                    tcGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGACGTTGAcc                                              >  1:2489706/1‑150 (MQ=255)
                                                                                                       cgGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTcc                                           <  1:1640959/150‑1 (MQ=255)
                                                                                                         gtggtgTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAg                                         <  2:3389263/150‑1 (MQ=255)
                                                                                                               tACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCg                                   >  2:1041765/1‑150 (MQ=255)
                                                                                                               tACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCg                                   >  2:1041841/1‑150 (MQ=255)
                                                                                                                tgctggCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCgg                                  >  1:41246/5‑150 (MQ=255)
                                                                                                                 cccGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTTCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGc                                 <  1:1683946/150‑1 (MQ=255)
                                                                                                                 cccGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGc                                 <  1:1683974/150‑1 (MQ=255)
                                                                                                                    ggCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCGTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGc                              <  2:4386001/150‑1 (MQ=255)
                                                                                                                      ccGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCtg                            <  1:767875/150‑1 (MQ=255)
                                                                                                                       cgcgCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCtgt                           >  1:3017539/1‑150 (MQ=255)
                                                                                                                            tCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGt                      >  2:4650906/1‑150 (MQ=255)
                                                                                                                            tCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGt                      >  2:3231904/1‑150 (MQ=255)
                                                                                                                               cgcAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCg                   <  2:2091442/150‑1 (MQ=255)
                                                                                                                               cgcAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCg                   >  1:1534165/1‑150 (MQ=255)
                                                                                                                                gcAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCgg                  <  1:2090896/150‑1 (MQ=255)
                                                                                                                                gcAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGACAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCgg                  >  1:4671654/1‑150 (MQ=255)
                                                                                                                                 cAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCggt                 <  2:2096185/150‑1 (MQ=255)
                                                                                                                                  aaCTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCggtg                >  2:1136959/1‑150 (MQ=255)
                                                                                                                                     tCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCggtgatg             <  2:3849724/150‑1 (MQ=255)
                                                                                                                                      cGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCggtgatgg            >  2:5102451/1‑150 (MQ=255)
                                                                                                                                      cGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCggtgatgg            >  1:4484876/1‑150 (MQ=255)
                                                                                                                                         ccAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCggtgatggtga         >  1:3913728/1‑150 (MQ=255)
                                                                                                                                          cagcagCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCggtgatggtgat        >  2:1278851/1‑150 (MQ=255)
                                                                                                                                          aagcagcGCAGCGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCTAGGTAGCGGCCGCTGTGGCGTTCggtgatggtgat        >  2:4868411/2‑150 (MQ=255)
                                                                                                                                          aagcagcGCAGCGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCggtgatggtgat        >  1:5269907/2‑150 (MQ=255)
                                                                                                                                          aagcagcGCAGCGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCggtgatggtgat        >  1:3624889/2‑150 (MQ=255)
                                                                                                                                           agcagcGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCGgtgatggtgatg       <  2:5196975/150‑1 (MQ=255)
                                                                                                                                            gcagcgcagcGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCGGtgatggtgatgg      >  1:4492915/1‑150 (MQ=255)
                                                                                                                                                cgcgcTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCGGTGATGGTGATGGCGTc  <  1:2634929/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
GCGGGCGGTCAGCAGCAGGCAATCCACTTCGTTGAGGGTGATCGGTTCCACCGAAACCTCGACCGTGAGGATATCGCCACGCTTGTTGCGCCCGAGCATCTCGCGGTGGTGTACCCGGCCGCGCTCGCGCAACTCGGCCAGCAGCGCGCTGCGCTGCTTGTCGTCGGCCCAGATGCCGATCTCATACACCGTGTGGCCGATCACTTCATCAGTGCTGTAGCCGGTCAGGCGGCAGAAGCCGTCGTTGACCTCCAGGTAGCGGCCGCTGTGGCGTTCGGTGATGGTGATGGCGTC  >  NC_002947/2249629‑2249922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: