Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,253,318 C→G 6.1% S228S (TCC→TCG leuC → 3‑isopropylmalate dehydratase large subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,253,3180CG 6.1% 658.2 / 23.5 197S228S (TCC→TCGleuC3‑isopropylmalate dehydratase large subunit
Reads supporting (aligned to +/- strand):  ref base C (85/100);  new base G (7/5);  total (92/105)
Fisher's exact test for biased strand distribution p-value = 5.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 199 total aligned reads displayed.

TTGCCTGCCGGCGTCACCGCCAAGGATATCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCTGGTGTCGGATGACGATGCCGTATT  >  NC_002947/2253169‑2253467
                                                                                                                                                     |                                                                                                                                                     
   gctccaggCGTCACCGCCAAGGACATCACGCTTGCAATCATTGGCGAGATTGGCACGGCTGGCGGCACAGGCTATGTGATCGAATATGCTGGCAGCGCCATTCGCTCGCTGTCGATGGAAGGCCGCATGACGGTCTGCAACATGTCGAtt                                                                                                                                                    >  1:3982313/7‑149 (MQ=255)
   gctccaggCGTCACCGCCAAGGACATCACGCTTGCAATCATTGGCGAGATTGGCACGGCTGGCGGCACAGGCTATGTGATCGAATATGCTGGCAGCGCCATTCGCTCGCTGTCGATGGAAGGCCGCATGACGGTCTGCAACATGTCGAtt                                                                                                                                                    <  2:2693456/144‑2 (MQ=255)
   cctgccGGCGTCACCGCCAAGGATATCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATc                                                                                                                                                    <  2:104182/150‑1 (MQ=255)
    ctgccGGCGTCACCGCCAAGGATATCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCg                                                                                                                                                   >  1:5426902/1‑150 (MQ=255)
     tgccGGCGTCACCGCCAAGGATATCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGa                                                                                                                                                  >  1:4912820/1‑150 (MQ=255)
     tccaggCGTCACCGCCAAGGACATCACGCTTGCAATCATTGGCGAGATTGGCACGGCTGGCGGCACAGGCTATGTGATCGAATATGCTGGCAGCGCCATTCGCTCGCTGTCGATGGAAGGCCGCATGACGGTCTGCAACATGTCGATTGa                                                                                                                                                  >  1:4865797/5‑150 (MQ=255)
     tccaggCGTCACCGCCAAGGACATCACGCTTGCAATCATTGGCGAGATTGGCACGGCTGGCGGCACAGGCTATGTGATCGAATATGCTGGCAGCACCATTCGCTCGCTGTCGATGGAAGGCCGCATGACGGTCTGCAACATGTCGATTGa                                                                                                                                                  >  1:864010/5‑150 (MQ=255)
      ccaggCGTCACCGCCAAGGACATCACGCTTGCAATCATTGGCGAGATTGGCACGGCTGGCGGCACAGGCTATGTGATCGAATATGCTGGCAGCGCCATTCGCTCGCTGTCGATGGAAGGCCGCATGACGGTCTGCAACATGTCGATTGaa                                                                                                                                                 <  1:3107287/147‑1 (MQ=255)
        cGGCGTCACCGCCAAGGATATCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGc                                                                                                                                               >  1:4816019/1‑150 (MQ=255)
        cGGCGTCACCGCCAAGGATATCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGc                                                                                                                                               >  2:2720067/1‑150 (MQ=255)
         ggCGTCACCGCCAAGGATATCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGcc                                                                                                                                              >  1:2710635/1‑150 (MQ=255)
         ggCGTCACCGCCAAGGATATCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGcc                                                                                                                                              >  2:3909052/1‑150 (MQ=255)
          gCGTCACCGCCAAGGACATCACGCTTGCAATCATTGGCGAGATTGGCACGGCTGGCGGCACAGGCTATGTGATCGAATATGCTGGCAGCGCCATTCGCTCGCTGTCGATGGAAGGCCGCATGACGGTCTGCAACATGTCGATTGAAGGCg                                                                                                                                             <  2:2576532/150‑1 (MQ=255)
           cGTCACCGCCAAGGACATCACGCTTGCAATCATTGGCGAGATTGGCACGGCTGGCGGCACAGGCTATGTGATCGAATATGCTGGCAGCGCCATTCGCTCGCTGTCGATGGAAGGCCGCATGACGGTCTGCAACATGTCGATTGAAGGCgg                                                                                                                                            <  2:132916/150‑1 (MQ=255)
            gTCACCGCCAAGGATATCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCCTTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGgc                                                                                                                                           >  2:4411669/1‑150 (MQ=255)
             tCACCGCCAAGGACATCACGCTTGCAATCATTGGCGAGATTGGCACGGCTGGCGGCACAGGCTATGTGATCGAATATGCTGGCAGCGCCATTCGCTCGCTGTCGATGGAAGGCCGCATGACGGTCTGCAACATGTCGATTGAAGgcggcg                                                                                                                                          >  1:2670278/1‑150 (MQ=255)
               aCCGCCAAGGATATCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGcc                                                                                                                                        >  2:775167/1‑150 (MQ=255)
               aCCGCCAAGGATATCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGcc                                                                                                                                        >  2:3510252/1‑150 (MQ=255)
                        gATATCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGc                                                                                                                               >  1:3151939/1‑150 (MQ=255)
                         atatCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGcc                                                                                                                              <  2:5006160/150‑1 (MQ=255)
                          tatCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCt                                                                                                                             >  1:2217309/1‑150 (MQ=255)
                          tatCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCt                                                                                                                             >  1:924475/1‑150 (MQ=255)
                              gTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCtggtg                                                                                                                         <  2:3580266/150‑1 (MQ=255)
                              gTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCtggtg                                                                                                                         <  1:194256/150‑1 (MQ=255)
                               tGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCtggtgg                                                                                                                        <  2:5304358/150‑1 (MQ=255)
                               tGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCtggtgg                                                                                                                        <  1:3413422/150‑1 (MQ=255)
                                  tGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATGCGCGAAGTGTCGCTGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCaa                                                                                                                     >  2:2386160/1‑150 (MQ=255)
                                    gCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAAcc                                                                                                                   >  1:1598716/1‑150 (MQ=255)
                                      cGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGa                                                                                                                 <  2:3692108/150‑1 (MQ=255)
                                      cGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGa                                                                                                                 >  2:580451/1‑150 (MQ=255)
                                      cGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGACCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGa                                                                                                                 >  2:4298612/1‑150 (MQ=255)
                                        tGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATg                                                                                                               <  1:2600310/150‑1 (MQ=255)
                                         gATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGc                                                                                                              >  1:1926251/1‑150 (MQ=255)
                                              gCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTa                                                                                                         >  1:622008/1‑150 (MQ=255)
                                              gCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTa                                                                                                         >  1:4574342/1‑150 (MQ=255)
                                                aaGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTAcc                                                                                                       >  2:689031/1‑150 (MQ=255)
                                                  gATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGt                                                                                                     >  1:4932364/1‑150 (MQ=255)
                                                   aTCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGtt                                                                                                    >  1:1841381/1‑150 (MQ=255)
                                                   aTCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGtt                                                                                                    <  2:2003621/150‑1 (MQ=255)
                                                   aTCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGtt                                                                                                    <  1:138425/150‑1 (MQ=255)
                                                    tCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTg                                                                                                   <  2:296449/150‑1 (MQ=255)
                                                    tCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTg                                                                                                   >  1:5231197/1‑150 (MQ=255)
                                                    tCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTg                                                                                                   <  1:2532170/150‑1 (MQ=255)
                                                     cGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGc                                                                                                  <  1:5381208/150‑1 (MQ=255)
                                                     cGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGc                                                                                                  >  1:1044099/1‑150 (MQ=255)
                                                     cGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGc                                                                                                  <  2:82142/150‑1 (MQ=255)
                                                        cACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTa                                                                                               >  1:4173622/1‑150 (MQ=255)
                                                         aCCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTAc                                                                                              >  1:68924/1‑150 (MQ=255)
                                                            gccgGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTc                                                                                           <  2:1654717/150‑1 (MQ=255)
                                                               ggTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGaa                                                                                        <  1:2850897/150‑1 (MQ=255)
                                                                gTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAg                                                                                       <  2:1598716/150‑1 (MQ=255)
                                                                 tGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAgg                                                                                      >  1:4572114/1‑150 (MQ=255)
                                                                   gCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGgc                                                                                    <  1:45354/150‑1 (MQ=255)
                                                                     aaCGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGgcgc                                                                                  >  1:431699/1‑150 (MQ=255)
                                                                          tCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTa                                                                             >  2:4696836/1‑150 (MQ=255)
                                                                             cGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTAcgc                                                                          <  1:4518048/150‑1 (MQ=255)
                                                                               ccATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACgcgc                                                                        <  1:1695871/150‑1 (MQ=255)
                                                                                  tGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTATGCGCCGa                                                                     >  2:2753210/1‑150 (MQ=255)
                                                                                     aaTTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAgg                                                                  >  1:4225545/1‑150 (MQ=255)
                                                                                      aTTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAggg                                                                 >  2:3533745/1‑150 (MQ=255)
                                                                                       ttCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGc                                                                <  1:245820/150‑1 (MQ=255)
                                                                                       ttCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGc                                                                <  2:505832/150‑1 (MQ=255)
                                                                                       ttCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCAACGTCGAAGGGCGCCCGTACGCGCCGAAGGGc                                                                <  2:220581/150‑1 (MQ=255)
                                                                                          gcaggcagTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAg                                                             <  2:2924538/150‑1 (MQ=255)
                                                                                           caggcagTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGc                                                            <  1:4670855/150‑1 (MQ=255)
                                                                                            aggcagTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCa                                                           <  2:5107771/150‑1 (MQ=255)
                                                                                            aggcagTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCa                                                           >  2:5394349/1‑150 (MQ=255)
                                                                                              gcagTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGt                                                         <  1:2149865/150‑1 (MQ=255)
                                                                                              gcagTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGt                                                         <  1:3717107/150‑1 (MQ=255)
                                                                                              gcagTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGt                                                         >  1:3776462/1‑150 (MQ=255)
                                                                                                  tGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAATGGCGAGCAGTGGaa                                                     <  2:2456381/150‑1 (MQ=255)
                                                                                                  tGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGaa                                                     <  1:102707/150‑1 (MQ=255)
                                                                                                  tGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGaa                                                     <  1:1397/150‑1 (MQ=255)
                                                                                                  tGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGaa                                                     >  1:163872/1‑150 (MQ=255)
                                                                                                      aTTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTAc                                                                                                        >  1:808614/1‑95 (MQ=255)
                                                                                                      aTTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGaagcaa                                                 >  1:3188591/1‑150 (MQ=255)
                                                                                                      aTTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGaagcaa                                                 >  1:1528725/1‑150 (MQ=255)
                                                                                                      aTTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGaagcaa                                                 <  2:4912820/150‑1 (MQ=255)
                                                                                                      aTTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGaagcaa                                                 <  2:3992420/150‑1 (MQ=255)
                                                                                                          gcgAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCgg                                             >  1:3052327/1‑150 (MQ=255)
                                                                                                           cgAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGt                                            <  2:1795593/150‑1 (MQ=255)
                                                                                                            gAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTc                                           <  2:212288/150‑1 (MQ=255)
                                                                                                                   cGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGt                                    <  2:1159966/150‑1 (MQ=255)
                                                                                                                    gATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTg                                   >  2:2493210/1‑150 (MQ=255)
                                                                                                                    gATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTg                                   <  1:202287/150‑1 (MQ=255)
                                                                                                                           ggCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGAc                            >  2:314085/1‑150 (MQ=255)
                                                                                                                            gCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGAcc                           <  2:2401641/150‑1 (MQ=255)
                                                                                                                             ccGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCt                          <  1:741307/150‑1 (MQ=255)
                                                                                                                                  tGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCTGgtgt                     <  1:477420/150‑1 (MQ=255)
                                                                                                                                      cATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCTGGTGTCGGa                 <  2:1091266/150‑1 (MQ=255)
                                                                                                                                       aTCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCTGGTGTCGGAt                <  1:4375262/150‑1 (MQ=255)
                                                                                                                                       aTCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCTGGTGTCGGAt                <  2:3223594/150‑1 (MQ=255)
                                                                                                                                         cTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGa                                                                                         >  1:632492/1‑75 (MQ=255)
                                                                                                                                          tGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCTGGTGTCGGATGAc             <  1:2720067/150‑1 (MQ=255)
                                                                                                                                           gCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCTGGTGTCGGATGACg            >  1:1747366/1‑150 (MQ=255)
                                                                                                                                            cAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCTGGTGTCGGATGACGa           >  2:1348814/1‑150 (MQ=255)
                                                                                                                                              aCATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCTGGTGTCGGATGACGATg         <  2:1487862/150‑1 (MQ=255)
                                                                                                                                                   tCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCTGGTGTCGGATGACGATGCCGTa    <  2:4794700/150‑1 (MQ=255)
                                                                                                                                                   tCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCTGGTGTCGGATGACGATGCCGTa    >  1:3729956/1‑150 (MQ=255)
                                                                                                                                                     cATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCTGGTGTCGGATGACGATGCCGTAtt  <  1:2415543/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TTGCCTGCCGGCGTCACCGCCAAGGATATCGTGCTGGCCGTGATCGGCAAGATCGGCACCGCCGGTGGCAACGGTCACGCCATGGAATTCGCAGGCAGTGCCATTCGCGAATTGTCGATGGAAGGCCGCATGACCATCTGCAACATGTCCATCGAAGCCGGCGCCCGCGTGGGCCTGGTGGCAACCGATGCCACTACCGTTGCCTACGTCGAAGGGCGCCCGTACGCGCCGAAGGGCGAGCAGTGGAAGCAAGCGGTCGAGTCGTGGAAAGACCTGGTGTCGGATGACGATGCCGTATT  >  NC_002947/2253169‑2253467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: