| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,315,637 | A→T | 7.8% | L139Q (CTG→CAG) | benE‑I ← | benzoate transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,315,637 | 0 | A | T | 7.8% | 328.2 / 13.6 | 102 | L139Q (CTG→CAG) | benE‑I | benzoate transport protein |
| Reads supporting (aligned to +/- strand): ref base A (46/48); new base T (3/5); total (49/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.42e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
CCAGGCCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGAC > NC_002947/2315488‑2315779 | ccAGGCCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCca > 2:1581370/1‑150 (MQ=255)ccAGGCCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCca > 1:1158522/1‑150 (MQ=255)ccAGGCCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCca > 2:2666035/1‑150 (MQ=255)ccAGGCCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCca > 1:5186663/1‑150 (MQ=255)ccAGGCCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCca > 1:5186756/1‑150 (MQ=255)ccAGGCCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCca > 2:5017545/1‑150 (MQ=255) cAGGCCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCcag > 2:2335677/1‑150 (MQ=255) aGGCCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCcagc < 2:1341213/150‑1 (MQ=255) aGGCCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCcagc > 1:2581319/1‑150 (MQ=255) gCCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCcagcag < 1:1418015/150‑1 (MQ=255) cccAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCTGCTgg < 2:569490/150‑1 (MQ=255) cccAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAgg < 1:821649/150‑1 (MQ=255) cccAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAgg < 1:4914533/150‑1 (MQ=255) cccAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAgg < 1:821696/150‑1 (MQ=255) cccAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGACGCCGGCCTGCTgg < 1:3666548/150‑1 (MQ=255) ccAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGc > 2:4475075/1‑150 (MQ=255) ccAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGc > 1:1184320/1‑150 (MQ=255) cagcagcagTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGcc > 2:1062361/1‑150 (MQ=255) cagcagcagTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGcc > 2:5280381/1‑150 (MQ=255) cagcagTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCTGCTGGCcggc < 1:4421849/150‑1 (MQ=255) agcagTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCcggcg < 2:309621/150‑1 (MQ=255) agcagTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCcggcg < 2:309504/150‑1 (MQ=255) cagTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCACTCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCggcggc < 2:3378589/150‑1 (MQ=255) gTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCaa < 2:2490248/150‑1 (MQ=255) tATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAAt < 2:4054837/150‑1 (MQ=255) tATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAAt > 2:3295958/1‑150 (MQ=255) tATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAAt < 1:3830414/150‑1 (MQ=255) tATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAAt > 2:3100606/1‑150 (MQ=255) aTGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCTGCTGGCcggcatcctgc < 2:227020/150‑8 (MQ=255) aTGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATg < 2:2347741/150‑1 (MQ=255) tGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATgc > 2:2689501/1‑150 (MQ=255) tGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATgc > 2:3642571/1‑150 (MQ=255) ggCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATgcc < 2:231490/150‑1 (MQ=255) gCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGACGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATgccg > 2:4414108/1‑150 (MQ=255) cGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATgccgc > 1:2514795/1‑150 (MQ=255) gACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATgccgcc < 2:2058438/150‑1 (MQ=255) ccACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCATTGCCGCCgg < 1:2131464/150‑1 (MQ=255) ccACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCgg < 1:2258794/150‑1 (MQ=255) cACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCggc < 1:3806635/150‑2 (MQ=255) gTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTAc < 2:1373969/150‑1 (MQ=255) ggCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCAc > 1:1140702/1‑150 (MQ=255) gAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCg < 1:2702702/150‑1 (MQ=255) gCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTc < 1:1145012/150‑1 (MQ=255) tttGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGaa < 2:2760542/150‑1 (MQ=255) tttGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGaa < 2:1339969/150‑1 (MQ=255) tttGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGaa > 2:4195229/1‑150 (MQ=255) gAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCTGCTGGCcggca < 1:2577871/109‑2 (MQ=255) gAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCTGCTGGCcggca > 2:2577871/1‑108 (MQ=255) aGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCAccc < 2:2581319/150‑1 (MQ=255) cacaTACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCt > 1:2480703/1‑150 (MQ=255) cacaTACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCt > 1:1802898/1‑150 (MQ=255) gCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGcccc > 2:2111800/1‑150 (MQ=255) aaTCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGcac < 2:544782/150‑1 (MQ=255) aaTCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGcac > 2:3831739/1‑150 (MQ=255) aaTCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGcac < 1:1377632/150‑1 (MQ=255) tCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGcacca < 2:2071019/150‑1 (MQ=255) tCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGcacca < 1:4386592/150‑1 (MQ=255) aGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACg > 2:663562/1‑150 (MQ=255) gCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGc > 2:12982/1‑137 (MQ=255) gCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGc < 1:12982/137‑1 (MQ=255) gCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGa > 2:2734035/1‑150 (MQ=255) cAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGaa < 2:1802898/150‑1 (MQ=255) cAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGaa > 2:3963826/1‑150 (MQ=255) ccGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCcg > 1:5258168/1‑150 (MQ=255) cGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCcgg < 2:2668207/150‑1 (MQ=255) ggCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAACGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCcggc > 2:1805933/1‑150 (MQ=255) gAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCggcggc < 1:2877569/150‑1 (MQ=255) gAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCggcggc > 1:4847845/1‑150 (MQ=255) gAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGAAGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCcgcggc > 1:2112086/1‑150 (MQ=255) ggggTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGAcag < 1:5074341/150‑1 (MQ=255) accgacAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAg < 2:3190526/150‑1 (MQ=255) cgacAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGc > 2:2489952/1‑150 (MQ=255) gacAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCa > 2:190847/1‑150 (MQ=255) cAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGAAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCAcc > 2:1017834/1‑150 (MQ=255) aGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCt > 1:1748929/1‑150 (MQ=255) aGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCt > 1:427196/1‑150 (MQ=255) gCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTAt < 2:2340353/150‑1 (MQ=255) aaaGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTc > 1:378292/1‑150 (MQ=255) aGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCTGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGc > 2:2450516/1‑150 (MQ=255) aCCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGcc < 1:2302071/142‑1 (MQ=255) aCCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGcc < 1:2302044/142‑1 (MQ=255) aCCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGcc > 2:2302071/1‑142 (MQ=255) aCCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGcc > 2:2302044/1‑142 (MQ=255) ccGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAg < 2:1158522/150‑1 (MQ=255) ccGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACg < 1:4475075/150‑1 (MQ=255) cGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGc > 1:5198127/1‑150 (MQ=255) gAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCt > 1:4889432/1‑150 (MQ=255) gAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCt > 1:1451205/1‑150 (MQ=255) gAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCt > 1:872154/1‑150 (MQ=255) aaCTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTg < 1:3661309/150‑1 (MQ=255) gcagcaGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCa < 1:2666035/150‑1 (MQ=255) agcagGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAgg < 1:5017545/150‑1 (MQ=255) gcagGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAggg < 2:1553490/150‑1 (MQ=255) attgccgCCGGCCTGCTGGCCGGCAGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGc > 2:831538/7‑150 (MQ=255) agGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCg < 1:2689501/150‑1 (MQ=255) gATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGt > 1:4774204/1‑150 (MQ=255) tGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGa < 1:2335677/150‑1 (MQ=255) tGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGa > 2:726304/1‑150 (MQ=255) tGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGa > 2:3089799/1‑150 (MQ=255) gCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGAc < 1:3735367/150‑1 (MQ=255) | CCAGGCCCAGCAGCAGTATGGCGACCACGGCGTAACGGGCGGTGAAGCGTTTGAAAGCCACATACGCTGCAATCAGCAACCCGGCGAGGCTGGGGTCGACCGACAGGCTGGCAAAGGCACCGATGCCGAACTGCAGCAGGATGCCGGCCAGCAGGCCGGCGGCAATGCCGCCGGGCACTACGCGCACCAGCCGCTCGAAGCACCCGCTCAGCCCCAGCACCACGAAGCCGGCGGCCGACAGCAGGTAGGCACCTATGGCCTCGCTGTAGGGCACGCTGGCCAGGGCGGTGAC > NC_002947/2315488‑2315779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |