| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 189,891 | G→T | 5.1% | intergenic (+53/+104) | PP_0165 → / ← PP_0166 | GGDEF domain‑containing protein/HlyD family secretion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 189,891 | 0 | G | T | 5.1% | 559.2 / 10.5 | 168 | intergenic (+53/+104) | PP_0165/PP_0166 | GGDEF domain‑containing protein/HlyD family secretion protein |
| Reads supporting (aligned to +/- strand): ref base G (78/81); new base T (4/5); total (82/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 174 total aligned reads displayed.
AGTCGAGACGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGATCGGCTT > NC_002947/189745‑190039 | agTCGAGACGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAg > 1:4240914/1‑150 (MQ=255)agTCGAGACGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAg > 2:3586917/1‑150 (MQ=255)agTCGAGACGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAg < 2:882727/150‑1 (MQ=255) gTCGAGACGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCCTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGc < 2:4022137/150‑1 (MQ=255) tCGAGACGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCg < 2:2066900/150‑1 (MQ=255) gagaCGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGc > 1:5024376/1‑150 (MQ=255) gagaCGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGc > 1:2129252/1‑150 (MQ=255) agaCGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCTACGCGGcc < 2:5241871/150‑1 (MQ=255) agaCGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGcc > 2:2173010/1‑150 (MQ=255) ggAAGGGGAGCGGTTGGTGTTGCTGGAGAGGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCa < 2:2872745/150‑1 (MQ=255) gAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCTACGCGGccctttt < 1:686809/150‑5 (MQ=255) gAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAg < 2:4045677/150‑1 (MQ=255) aaGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAgg > 1:2477369/1‑150 (MQ=255) ggggAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGtt > 1:2156993/1‑150 (MQ=255) ggAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCa > 1:5165530/1‑150 (MQ=255) ggAGCGGTTGGTGTTGCGGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCa > 1:219368/1‑150 (MQ=255) gAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCAc > 1:3333556/1‑150 (MQ=255) aGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACg < 2:2477369/150‑1 (MQ=255) cGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTa < 1:1594929/150‑1 (MQ=255) ttGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCg > 2:4376753/1‑150 (MQ=255) ttGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCg > 2:3685967/1‑150 (MQ=255) gtgtTGCGGGTGATGGGTGTCGGCGGGTTTCTGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGATTGGCCGCTCGCGTGCCGCTGTAGGGGTGGGCTAGCGCCGAAAATGGGCCGCGTTGCGGCCCCCAGGTTCACGTAGCGAtt < 1:1152629/150‑1 (MQ=255) ttGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGc > 2:4443177/1‑150 (MQ=255) tGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACGGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCa < 1:1644938/150‑1 (MQ=255) gCTGGAGTTGGGAGTCGGCGGGATTCAGGGGCAAGTGGTGGGTGAGCCTGCGCCTTGGCGCTTACTGGCCGCTCGCGGGCCGCTGTAGGCGTGGGCTAGAGCCGAAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAg < 1:4095863/150‑1 (MQ=255) gCTGGAGTTGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAg < 2:2954723/150‑1 (MQ=255) gCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAg < 2:4150303/150‑1 (MQ=255) cTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAgg > 2:5228492/1‑150 (MQ=255) cTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAgg > 1:2993361/1‑150 (MQ=255) tGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAggg > 1:3992581/1‑150 (MQ=255) gaTGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGgctgc < 2:132326/150‑1 (MQ=255) aTGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGgctgct > 1:988585/1‑150 (MQ=255) gggAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTg > 2:5395272/1‑150 (MQ=255) gggAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTg > 1:4350180/1‑150 (MQ=255) tgTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTAc < 1:3533510/149‑1 (MQ=255) ggCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGcc > 1:1052042/1‑150 (MQ=255) gCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGccc > 2:1445672/1‑150 (MQ=255) gCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGccc > 2:1624340/1‑150 (MQ=255) gggATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTg > 2:5182237/1‑150 (MQ=255) gggATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTg > 1:3824814/1‑150 (MQ=255) gATTCTGGGGCTACTGGTGGGTGTGCCTGCGCCTTGGCGCTGATTGGCCTCTCGCTTGCCGCTGTTGGGGTGGGCTAGAGCCGCAAAAGGGCCGCTTTGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTc < 1:5066811/150‑1 (MQ=255) gATTCCGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTc < 2:74444/150‑1 (MQ=255) gATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTc < 2:5057081/150‑1 (MQ=255) ttCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTCGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTcgc < 1:290316/150‑1 (MQ=255) ttCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTcgc > 2:3693859/1‑150 (MQ=255) tCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTcgcg > 1:4674371/1‑150 (MQ=255) aGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGAc > 1:3001053/1‑150 (MQ=255) aGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGAc > 1:1308688/1‑150 (MQ=255) gCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGa < 2:3992581/150‑1 (MQ=255) gCAACGGGTGGGTGAGCCTGCGCCTGGGCGCTGAAGGGCCCCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGa < 1:3933478/150‑1 (MQ=255) aCTGGTGGGTGAGCCTGCGCCTTGGCGCTGACTGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGc < 1:4442049/150‑1 (MQ=255) cTGGTGGGTGTGCCTGCGCCTTGGCGCGGAATGGCGTGGCGGGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGcc < 2:4256147/150‑1 (MQ=255) gtgggtgAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTCCAGCCCTGTCGCGACATGAGGCCGCt > 2:48207/1‑150 (MQ=255) ggggtgCGCCGGCGCCTGGGCGCTGAAGGGCCTCTCGCGTGCCGCTGTCGGCGTGGGCTAGAGCCGCAAACGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTc < 1:1186796/149‑1 (MQ=255) gggtgAGCCTGCGCCTTGGCGCTGAATGGCCTCACGCGTGCCGCGGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTcc < 1:5222283/150‑1 (MQ=255) gAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTaaa < 2:4150699/150‑1 (MQ=255) aGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAg < 1:705633/150‑1 (MQ=255) tGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAAt > 1:1027966/1‑150 (MQ=255) gcgcCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATg > 2:3914841/1‑150 (MQ=255) cgcCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATgg < 1:2541353/150‑1 (MQ=255) cgcCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATgg < 2:5165530/150‑1 (MQ=255) gcCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTGCAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGc > 2:1196118/1‑150 (MQ=255) gcCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGTCCGCTCCTAAAGCAATGGc > 2:1683973/1‑150 (MQ=255) cTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGa < 1:4058838/127‑1 (MQ=255) cTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGa > 2:1271499/1‑150 (MQ=255) cTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGa > 1:1855763/1‑150 (MQ=255) tGGCGCTGAAGGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGaaa < 2:3725865/150‑1 (MQ=255) ggCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAAc < 1:4567572/150‑1 (MQ=255) gcTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCg > 1:1486839/1‑150 (MQ=255) tGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCATACGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCa < 2:4495905/150‑1 (MQ=255) tGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGCAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCa < 2:2436544/150‑1 (MQ=255) aTGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGt > 1:2659708/1‑150 (MQ=255) tGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGtt > 2:2935069/1‑150 (MQ=255) tGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGtt < 2:2721978/150‑1 (MQ=255) tGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCAGCTCCTAAAGCAATGGCGAAACCCGCAGGtt > 2:2246315/1‑150 (MQ=255) ggCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACa < 1:549519/97‑1 (MQ=255) ggCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTg < 2:4551712/150‑1 (MQ=255) tctcGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTa > 2:4852763/1‑150 (MQ=255) cgcgTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCa < 1:4839289/150‑1 (MQ=255) gTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCa < 2:3027565/150‑1 (MQ=255) aGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAgc < 1:2507254/150‑1 (MQ=255) gCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGAAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAgcgc > 1:1725367/1‑150 (MQ=255) gCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCCGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGa > 2:354349/1‑150 (MQ=255) gCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGa > 1:3482256/1‑150 (MQ=255) tAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAAc < 2:5095845/150‑1 (MQ=255) gCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCtt > 2:584296/1‑150 (MQ=255) gCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCtt < 1:4915327/150‑1 (MQ=255) taaaGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCa < 2:3433268/149‑1 (MQ=255) ctgggggCCGCTACGCGGCCCTCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATg < 2:1567885/90‑1 (MQ=255) ctgggggCCGCTACGCGGCCCTCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATg > 1:1567751/5‑94 (MQ=255) aaaaGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCa < 2:4674371/150‑1 (MQ=255) aaaGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTACAGCACTGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCAt > 2:1998051/1‑150 (MQ=255) aaaGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCAt > 2:3442712/1‑150 (MQ=255) aaaGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCAt < 1:3374398/150‑1 (MQ=255) gggggCCGCTACGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTACAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATg > 2:949775/3‑150 (MQ=255) aGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGa < 2:5139869/150‑1 (MQ=255) aGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGa < 2:4670819/150‑1 (MQ=255) cgcgTAGCGGCCCCCAGGTTCACGTAGCTATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGTTTGTGTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGATCGGc < 1:4241352/150‑1 (MQ=255) gcgTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTc > 2:696007/1‑127 (MQ=255) cgTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGATCGGCtt < 2:2659708/150‑1 (MQ=255) | AGTCGAGACGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTAGGCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGAATGGCCTCTCGCGTGCCGCTGTAGGCGTGGGCTAGAGCCGCAAAAGGGCCGCGTAGCGGCCCCCAGGTTCACGTAGCGATTTGCAGGGCTGCTTGTACAGCCCTGTCGCGACATGAGGCCGCTCCTAAAGCAATGGCGAAACCCGCAGGTTGGCTATCACCGCTCGCGCAGCGCTTCCGAACGCGCCTTCATGATCGGCTT > NC_002947/189745‑190039 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |