| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,374,046 | G→T | 5.4% | intergenic (+33/+79) | gdhB → / ← PP_2081 | NAD‑specific glutamate dehydrogenase/phosphoenolpyruvate synthase regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,374,046 | 0 | G | T | 5.4% | 507.5 / 10.0 | 152 | intergenic (+33/+79) | gdhB/PP_2081 | NAD‑specific glutamate dehydrogenase/phosphoenolpyruvate synthase regulatory protein |
| Reads supporting (aligned to +/- strand): ref base G (63/80); new base T (5/4); total (68/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 153 total aligned reads displayed.
GCCATGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGC > NC_002947/2373897‑2374194 | ccATGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGt < 1:1791411/150‑1 (MQ=255) aTGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGa > 2:3452788/1‑150 (MQ=255) gCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATg < 2:1027606/150‑1 (MQ=255) tCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGcc > 1:1153226/1‑150 (MQ=255) tCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGcc > 2:753642/1‑150 (MQ=255) tCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGcc > 1:1366408/1‑150 (MQ=255) acgacCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCggg < 2:924584/150‑1 (MQ=255) cgacCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCgggg < 1:525979/150‑1 (MQ=255) ccTGCGAAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAATGCCCCGGCAGTGATGCCGGGGC‑tt > 2:116622/1‑150 (MQ=255) tGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttt < 1:2709932/150‑1 (MQ=255) tGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttt > 2:2249748/1‑150 (MQ=255) gcgcAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑ttttt < 1:3563624/150‑1 (MQ=255) gcAATGCCCCGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAAAAAAGCCCCGGCATCACTGCCGGGGC‑tttgttt < 1:3457385/150‑1 (MQ=39) cAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttttttt < 1:330625/150‑1 (MQ=255) cAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttttttt < 2:5286020/150‑1 (MQ=255) cAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGCACAACAACGCCCCGGCAGTGATGCCGGGGC‑tttttttt < 2:4148213/150‑1 (MQ=255) aaTGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTg > 1:1170285/1‑150 (MQ=255) tGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAAAAAAGCCCCGGCATCACTGCCGGGGC‑tttgttttacc < 1:4345865/150‑4 (MQ=38) gCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑ATTTTTTTGT‑At < 2:3827586/150‑1 (MQ=255) ccACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATg > 1:3942931/1‑150 (MQ=255) ccACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATg > 2:3308304/1‑150 (MQ=255) cACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGt > 1:2163963/1‑125 (MQ=255) cACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGt < 2:2163963/125‑1 (MQ=255) cACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGc > 1:2948065/1‑150 (MQ=255) cGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAATGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCt > 2:4443668/1‑150 (MQ=255) cGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCt < 1:4651584/150‑1 (MQ=255) cACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTgggc < 1:2988924/150‑1 (MQ=255) aCTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTgggcg < 2:2948065/150‑1 (MQ=255) aCTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTgggcg > 2:3184059/1‑150 (MQ=255) cTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTgggcgg < 1:4038166/150‑1 (MQ=255) cTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCa > 2:5166080/1‑150 (MQ=255) tGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCAttt < 1:3810317/150‑1 (MQ=255) cGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTcg > 1:2154592/1‑150 (MQ=255) gATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTcgc < 1:1791881/150‑1 (MQ=255) gATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTcgc > 1:1286702/1‑150 (MQ=255) gATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTcgc < 1:1791808/150‑1 (MQ=255) gATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTcgc > 1:1286703/1‑150 (MQ=255) cagctcgcgGTTGGCCACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGCTTTTTTTTTGT‑ATGCCTGGGCGGGCCATTTcgc > 1:417166/6‑150 (MQ=255) aTGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTcgcg < 1:2524355/150‑1 (MQ=255) tGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGTC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCgg < 2:2277117/150‑1 (MQ=255) tGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCgg < 2:3424382/150‑1 (MQ=255) tGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCgg < 1:1139257/150‑1 (MQ=255) tGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCAGGCCATTTCGCgg < 2:639083/150‑1 (MQ=255) gTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCggg > 2:3024589/1‑150 (MQ=255) cgGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCgggg < 1:1783411/109‑1 (MQ=255) cgGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCgggg > 2:1783411/1‑109 (MQ=255) gCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCt > 1:2728190/1‑150 (MQ=255) cAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTcc > 1:2503170/1‑150 (MQ=255) cgcgAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACa > 1:940924/1‑150 (MQ=255) cgcgAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACa > 1:3682336/1‑150 (MQ=255) aGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑gggg < 1:1364869/150‑1 (MQ=255) aGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑gggg < 2:1498845/150‑1 (MQ=255) gTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAATGCCACGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGTGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGggggcg > 1:3257922/1‑150 (MQ=255) gTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑‑TTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGggggcgg < 1:5173451/150‑1 (MQ=255) cGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAACACAACGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGggggcggg < 2:1040440/150‑1 (MQ=255) cGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGggggcggg < 2:736057/150‑1 (MQ=255) aCCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGggggcggggc < 2:2840892/150‑1 (MQ=255) cgggCCATGCGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAACGCCCCGGCAGTGAGGCGGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACAGGGGGGGGCGGGGCt < 1:4221260/148‑1 (MQ=39) tGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTTGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGt < 2:2939092/150‑1 (MQ=255) gCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTa > 1:4742609/1‑150 (MQ=255) gCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑‑TTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTAc < 1:1244047/150‑1 (MQ=255) ccATGAGCGGGCAGGCAGCGGTGGTGCCGTCCGGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTAc < 2:2000076/150‑1 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTgggcgggc > 2:4799288/1‑103 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTgggcgggc > 2:4799300/1‑103 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTgggcgggc < 1:4799288/103‑1 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTgggcgggc < 1:4799300/103‑1 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACt < 1:3024589/150‑1 (MQ=255) cgCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGACGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGaa < 2:4867772/149‑1 (MQ=255) gcaggcagCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGtc > 2:2775196/1‑150 (MQ=255) gcagCGGTGGTGCCGTCCTGAGCCTTTTAGTGAGCTAAAACAAAGCCCCGCCAGTGATGCCGGGGA‑ATTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGtctctc < 1:5425771/150‑1 (MQ=39) cagCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTcc < 1:524310/150‑1 (MQ=255) gtgCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCttt < 1:3508538/150‑1 (MQ=255) tgCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCtttt < 1:1972110/150‑1 (MQ=255) gCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCttttt < 2:4915674/150‑1 (MQ=255) ccGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGTACCCGCTCCTACAGGGGGGGGCGGGGCTGTTACTTGa > 1:5066324/1‑129 (MQ=255) ccGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTc > 2:2696624/1‑150 (MQ=255) acGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATATCGCGGGTGAACCCGCTCCAACA‑GGGTGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTc > 2:2696530/2‑150 (MQ=255) tCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGAGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGAc > 1:834928/1‑150 (MQ=255) ccTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑gggggg < 2:3540126/107‑1 (MQ=255) cTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCa < 2:1153226/150‑1 (MQ=255) gAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCCgg > 1:4728410/1‑150 (MQ=255) tAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGc < 2:2970983/150‑1 (MQ=255) tAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑ATTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGc < 2:609082/150‑1 (MQ=255) tAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑ATTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGc < 2:3906807/150‑1 (MQ=255) aGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGaaa > 1:1925074/1‑150 (MQ=255) tAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAtct > 2:4347608/1‑150 (MQ=255) aaaaaaaaGCCCCGTCATCACTGCAGGGGC‑TGTGTTTTGT‑ATGCCAGGTCGGGCCATTTCGCGGGTGAACCCGAACCTACC‑GGGGGGGCGGCGCTGTTACTTGAACCTTCTATCCACGCCTTGTTAGACCAGGAACTTGGCGGAAAtctc > 2:168555/1‑150 (MQ=255) aaaaaaaaGCCCCGGCATCACTGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAtctc > 1:3019454/1‑150 (MQ=39) aaaaaaaaGCCCCGGCATCACTGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATATCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAtctc > 1:3985732/1‑150 (MQ=255) aaaaaaaaGCCCCGGCATCACTGCCGGGGC‑TTTGTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAtctc > 1:2321804/1‑150 (MQ=39) aaaaCAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAtctc > 1:2117927/1‑150 (MQ=255) aaCAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCtt < 2:5189220/150‑1 (MQ=255) aGCCCCGGCATCACTGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCAcc > 1:2577083/1‑150 (MQ=255) gCCCCGGCCGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACC‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCCCGCC‑TTTTCGTCCAGGCTCTGGGCGGAAATCTCTTCCACCGa > 2:239314/1‑150 (MQ=255) gCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCC‑TGTTCGACCAGGATCGTGGCGGAAATCTCTTCCACCGa > 2:239319/1‑150 (MQ=255) ccccGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTc > 2:3592285/1‑67 (MQ=255) ccccGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTc < 1:3592285/67‑1 (MQ=255) cccGGCAGTGATGCCGGGGC‑TTTTTTTTTTGATTCCGGGGCGGGCCAATTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCGGTTACTTGAAACGTCTCTCCACGCCATTTTAGACCAGGATATTGGCGGAAATCTCGTACACCGa > 2:5222581/1‑150 (MQ=255) gCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAAt > 2:2535954/1‑150 (MQ=255) aGTGATGCCGGGGC‑TTTATGTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGc < 2:2093223/150‑1 (MQ=255) | GCCATGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGT‑ATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGC > NC_002947/2373897‑2374194 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |