| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,374,048 | G→A | 5.6% | intergenic (+35/+77) | gdhB → / ← PP_2081 | NAD‑specific glutamate dehydrogenase/phosphoenolpyruvate synthase regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,374,048 | 0 | G | A | 5.6% | 496.6 / 12.0 | 159 | intergenic (+35/+77) | gdhB/PP_2081 | NAD‑specific glutamate dehydrogenase/phosphoenolpyruvate synthase regulatory protein |
| Reads supporting (aligned to +/- strand): ref base G (64/86); new base A (5/4); total (69/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
Only 100 of 160 total aligned reads displayed.
ATGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGTG > NC_002947/2373900‑2374197 | aTGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGa > 2:1745487/1‑150 (MQ=255) gCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATg < 2:1027606/150‑1 (MQ=255) tCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGcc > 1:1153226/1‑150 (MQ=255) tCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGcc > 2:753642/1‑150 (MQ=255) cgacgaCCTGCGCAATGCCACGGGCACTGACTATGCTATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGTCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCg < 2:4750757/150‑1 (MQ=255) gacgacCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCgg > 2:5207033/1‑150 (MQ=255) acgacCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCggg < 2:924584/150‑1 (MQ=255) cgacCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCATCACTGCCgggg < 1:1350128/150‑1 (MQ=255) ccTGCGAAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAATGCCCCGGCAGTGATGCCGGGGC‑tt > 2:116622/1‑150 (MQ=255) tGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttt < 1:2709932/150‑1 (MQ=255) gcgcAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑ttttt < 1:3563624/150‑1 (MQ=255) cgcAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttttt < 1:4788968/150‑1 (MQ=255) cgcAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttttt > 2:1136913/1‑150 (MQ=255) cAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttttttt < 1:4255740/150‑1 (MQ=255) cAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttttttt < 1:330625/150‑1 (MQ=255) cAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttttttt < 2:5286020/150‑1 (MQ=255) aaTGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTg > 1:1170285/1‑150 (MQ=255) aTGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAAAAAAGCCCCGGCATCACTGCCGGGGC‑tttgttttac < 2:2350802/150‑3 (MQ=38) tGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAAAAAAGCCCCGGCATCACTGCCGGGGC‑tttgttttacc < 1:4345865/150‑4 (MQ=38) gCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑ATTTTTTTGTAt < 2:3827586/150‑1 (MQ=255) ccACGGGCACTGACTCTGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGGAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATg > 2:4235867/1‑150 (MQ=255) ccACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATg > 2:3308304/1‑150 (MQ=255) ccACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATg > 1:3942931/1‑150 (MQ=255) cACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGc > 1:2948065/1‑150 (MQ=255) cGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCt < 1:4651832/150‑1 (MQ=255) cACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTgggc < 1:2989190/150‑1 (MQ=255) aCTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTgggcg < 2:2948065/150‑1 (MQ=255) aCTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTgggcg > 2:3184059/1‑150 (MQ=255) cTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTgggcgg < 1:4038166/150‑1 (MQ=255) tGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCAttt < 1:3810317/150‑1 (MQ=255) cGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTcg > 1:2154802/1‑150 (MQ=255) gATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTcgc > 1:1286702/1‑150 (MQ=255) gATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTcgc < 1:1791808/150‑1 (MQ=255) cagctcgcgGTTGGCCACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGCTTTTTTTTTGTATGCCTGGGCGGGCCATTTcgc > 1:417166/6‑150 (MQ=255) tGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGTC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCgg < 2:2277117/150‑1 (MQ=255) tGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCgg < 2:3424382/150‑1 (MQ=255) tGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCgg < 1:1139257/150‑1 (MQ=255) tGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCAGGCCATTTCGCgg < 2:639083/150‑1 (MQ=255) gTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCggg > 2:3024589/1‑150 (MQ=255) aCGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTg > 2:3528887/1‑150 (MQ=255) cgGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCgggg < 1:1783411/109‑1 (MQ=255) gCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCt > 1:2728190/1‑150 (MQ=255) cAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTcc > 1:2503170/1‑150 (MQ=255) cgcgAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACa > 1:3682336/1‑150 (MQ=255) cgcgAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACa > 1:940924/1‑150 (MQ=255) gAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑ggg < 2:2503170/150‑1 (MQ=255) aGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑gggg < 1:1364869/150‑1 (MQ=255) aGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑gggg < 2:1498845/150‑1 (MQ=255) gTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAATGCCACGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGTGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGggggcg > 1:3257922/1‑150 (MQ=255) gTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑‑TTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGggggcgg < 1:5173451/150‑1 (MQ=255) cGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGggggcggg < 2:736057/150‑1 (MQ=255) aCCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGggggcggggc < 2:2840892/150‑1 (MQ=255) ccTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCt < 2:4803611/150‑1 (MQ=255) gCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑‑TTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTAc < 1:1244047/150‑1 (MQ=255) ccATGAGCGGGCAGGCAGCGGTGGTGCCGTCCGGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTAc < 2:2000076/150‑1 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTgggcgggc > 2:4799288/1‑103 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTgggcgggc < 1:4799300/103‑1 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACt < 1:3024589/150‑1 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTAGGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACC‑GGGGGGGCGGGGCTGTTACt < 2:1170285/150‑1 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑‑TTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGGTACtt > 2:4136427/1‑150 (MQ=255) gcagCGGTGGTGCCGTCCTGAGCCTTTTAGTGAGCTAAAACAAAGCCCCGCCAGTGATGCCGGGGA‑ATTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGtctctc < 1:5425771/150‑1 (MQ=39) gcagCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGtctctc > 2:2719413/1‑150 (MQ=255) gcagCGGTGGTGCCGTCCTGAGCCGTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATGTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTGACGGGACCCGgctctc > 2:2911871/1‑150 (MQ=255) cagCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTcc < 1:524310/150‑1 (MQ=255) gtgCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCttt < 1:3508538/150‑1 (MQ=255) tgCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCtttt < 1:1972110/150‑1 (MQ=255) gCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCttttt < 2:4915674/150‑1 (MQ=255) ccGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGTACCCGCTCCTACAGGGGGGGGCGGGGCTGTTACTTGa > 1:5066324/1‑129 (MQ=255) ccGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACAGGGGGGGGCGGGGCTGTTACTTGa < 2:5066324/129‑1 (MQ=255) ccGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTc > 2:2696624/1‑150 (MQ=255) ccGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCACTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTc > 2:2683650/1‑150 (MQ=255) tCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGAGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGAc > 1:834928/1‑150 (MQ=255) ccTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑gggggg < 2:3540126/107‑1 (MQ=255) gAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCCgg > 1:4728410/1‑150 (MQ=255) tAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGc < 2:2970983/150‑1 (MQ=255) tAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑ATTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGc < 2:609082/150‑1 (MQ=255) tGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGa > 1:3399400/1‑150 (MQ=255) aGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGaaa > 1:1925074/1‑150 (MQ=255) ggTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAt > 1:2515860/1‑150 (MQ=255) tAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAtct > 2:4347608/1‑150 (MQ=255) aaaaaaaaGCCCCGGCATCACTGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATATCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAtctc > 1:3985732/1‑150 (MQ=255) aaaaCAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAtctc > 1:2117927/1‑150 (MQ=255) aaCAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCtt > 2:2205350/1‑150 (MQ=255) aaCAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCtt < 2:5189220/150‑1 (MQ=255) aaGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCAc < 2:3682336/150‑1 (MQ=255) aaGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCAc < 1:5354619/150‑1 (MQ=255) aGCCCCGGCATCACTGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCAcc > 1:2577083/1‑150 (MQ=255) gCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCg > 1:1529334/1‑150 (MQ=255) gCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCC‑TGTTCGACCAGGATCGTGGCGGAAATCTCTTCCACCGa > 2:239319/1‑150 (MQ=255) ccccGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTc < 1:3592285/67‑1 (MQ=255) aGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGc < 1:2249748/150‑1 (MQ=255) aGTGATGCCGGGGC‑TTTATGTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGc < 2:2093223/150‑1 (MQ=255) aGTGATGCCGGGGC‑ATTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGc < 1:1796973/150‑1 (MQ=255) tGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTTGCGGAAATCTCTTCCACCGAAAAATGCGt > 1:1887338/1‑150 (MQ=255) tGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGt < 1:4914773/150‑1 (MQ=255) tGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGt < 1:2793537/150‑1 (MQ=255) tGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGt < 2:1088552/150‑1 (MQ=255) tGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGt < 1:3180660/150‑1 (MQ=255) tGATGCCGGGGC‑TTTTTTTTGTATGCCGGGGCGGGCCATTTCGCGGGTGAACCCGCCCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGt < 1:3513597/150‑1 (MQ=255) tGATGCCGGGGC‑ATTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGt < 2:1719221/150‑1 (MQ=255) | ATGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGTG > NC_002947/2373900‑2374197 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |