| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,374,049 | A→C | 5.7% | intergenic (+36/+76) | gdhB → / ← PP_2081 | NAD‑specific glutamate dehydrogenase/phosphoenolpyruvate synthase regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,374,049 | 0 | A | C | 5.7% | 513.7 / 16.3 | 158 | intergenic (+36/+76) | gdhB/PP_2081 | NAD‑specific glutamate dehydrogenase/phosphoenolpyruvate synthase regulatory protein |
| Reads supporting (aligned to +/- strand): ref base A (62/86); new base C (5/4); total (67/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.34e-01 | |||||||||||
Only 100 of 162 total aligned reads displayed.
ATGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGTGG > NC_002947/2373900‑2374198 | aTGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGa > 2:3452788/1‑150 (MQ=255)aTGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGa > 2:1745487/1‑150 (MQ=255) gCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATg < 2:1027606/150‑1 (MQ=255) tCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGcc > 1:1153226/1‑150 (MQ=255) tCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGcc > 2:753642/1‑150 (MQ=255) gacgacCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCgg > 2:5207033/1‑150 (MQ=255) acgacCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCggg < 2:924584/150‑1 (MQ=255) cgacCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCATCACTGCCgggg < 1:1350128/150‑1 (MQ=255) ccTGCGAAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAATGCCCCGGCAGTGATGCCGGGGC‑tt > 2:116622/1‑150 (MQ=255) tGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttt > 2:5354619/1‑150 (MQ=255) cgcAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttttt > 2:1136913/1‑150 (MQ=255) cgcAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttttt < 1:4788968/150‑1 (MQ=255) gcAATGCCCCGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAAAAAAGCCCCGGCATCACTGCCGGGGC‑tttgttt < 1:3457385/150‑1 (MQ=39) cAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttttttt < 1:330625/150‑1 (MQ=255) cAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑tttttttt < 2:5286020/150‑1 (MQ=255) cAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGCACAACAACGCCCCGGCAGTGATGCCGGGGC‑tttttttt < 2:4148213/150‑1 (MQ=255) aaTGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTg > 1:1170285/1‑150 (MQ=255) aTGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGt < 1:2583071/150‑1 (MQ=255) tGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAAAAAAGCCCCGGCATCACTGCCGGGGC‑tttgttttacc < 1:4345865/150‑4 (MQ=38) gCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑ATTTTTTTGTAt < 2:3827586/150‑1 (MQ=255) ccACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATg > 2:3308304/1‑150 (MQ=255) ccACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATg > 1:3942931/1‑150 (MQ=255) cACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGc > 1:2948065/1‑150 (MQ=255) cGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAATGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCt > 2:4443668/1‑150 (MQ=255) cGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCt < 1:4651832/150‑1 (MQ=255) cACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTgggc < 1:2988924/150‑1 (MQ=255) cTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTgggcgg < 1:4038166/150‑1 (MQ=255) cGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTcg > 1:2154802/1‑150 (MQ=255) cGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTcg > 1:2154592/1‑150 (MQ=255) gATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTcgc > 1:1286702/1‑150 (MQ=255) gATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTcgc < 1:1791808/150‑1 (MQ=255) cagctcgcgGTTGGCCACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGCTTTTTTTTTGTATGCCTGGGCGGGCCATTTcgc > 1:417166/6‑150 (MQ=255) aTGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTcgcg < 1:2524355/150‑1 (MQ=255) tGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGTC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCgg < 2:2277117/150‑1 (MQ=255) tGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCgg < 1:1139257/150‑1 (MQ=255) tGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCAGGCCATTTCGCgg < 2:639083/150‑1 (MQ=255) gTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCggg > 2:3024589/1‑150 (MQ=255) cgGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCgggg < 1:1783411/109‑1 (MQ=255) gCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCt > 1:2728190/1‑150 (MQ=255) cgcgAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACa > 1:3682336/1‑150 (MQ=255) cgcgAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACa < 2:3062665/150‑1 (MQ=255) cgcgAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACa > 1:940924/1‑150 (MQ=255) gAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑ggg < 2:2503170/150‑1 (MQ=255) aGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑gggg < 2:1498845/150‑1 (MQ=255) aGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑gggg < 2:3326167/150‑1 (MQ=255) aGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑gggg < 1:1364869/150‑1 (MQ=255) gTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGggggcg < 1:3219873/150‑1 (MQ=255) gTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑‑TTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGggggcgg < 1:5173451/150‑1 (MQ=255) cGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGggggcggg < 2:736057/150‑1 (MQ=255) gACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGggggcgggg < 1:3967256/150‑1 (MQ=255) ccTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCt < 2:4803611/150‑1 (MQ=255) cgggCCATGCGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAACGCCCCGGCAGTGAGGCGGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACAGGGGGGGGCGGGGCt < 1:4221260/148‑1 (MQ=39) tGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTTGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGt < 2:2939092/150‑1 (MQ=255) gCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑‑TTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTAc < 1:1244047/150‑1 (MQ=255) ccATGAGCGGGCAGGCAGCGGTGGTGCCGTCCGGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTAc < 2:2000076/150‑1 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTgggcgggc > 2:4799288/1‑103 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTgggcgggc < 1:4799288/103‑1 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTAGGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACC‑GGGGGGGCGGGGCTGTTACt < 2:1170285/150‑1 (MQ=255) cATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑‑TTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGGTACtt > 2:4136427/1‑150 (MQ=255) cgCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGACGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGaa < 2:4867772/149‑1 (MQ=255) gcaggcagCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGtc > 2:2775196/1‑150 (MQ=255) gcagCGGTGGTGCCGTCCTGAGCCTTTTAGTGAGCTAAAACAAAGCCCCGCCAGTGATGCCGGGGA‑ATTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGtctctc < 1:5425771/150‑1 (MQ=39) gcagCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGtctctc > 2:2719413/1‑150 (MQ=255) gcagCGGTGGTGCCGTCCTGAGCCGTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATGTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTGACGGGACCCGgctctc > 2:2911871/1‑150 (MQ=255) cagCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTcc < 1:524310/150‑1 (MQ=255) ccGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGTACCCGCTCCTACAGGGGGGGGCGGGGCTGTTACTTGa > 1:5066324/1‑129 (MQ=255) ccGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACAGGGGGGGGCGGGGCTGTTACTTGa < 2:5066324/129‑1 (MQ=255) acGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATATCGCGGGTGAACCCGCTCCAACA‑GGGTGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTc > 2:2696530/2‑150 (MQ=255) tCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGAGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGAc > 1:834928/1‑150 (MQ=255) ccTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑gggggg > 1:3540126/1‑107 (MQ=255) ccTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑gggggg < 2:3540126/107‑1 (MQ=255) cTGAGCCTGGTAGTGTGGTAAAACATAGCCCCGGCAGTGTTGCCGGGGC‑TTTTTTTTGTATGCCGGGGCGGGCCTTTTGGCGGGTGAACCCGCTCCTCCA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCa < 1:208709/150‑1 (MQ=255) gAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCCgg > 1:4728410/1‑150 (MQ=255) aGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGaaa > 1:1925074/1‑150 (MQ=255) ggTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAt > 1:2515860/1‑150 (MQ=255) tAAAACAACGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAtct < 1:376733/150‑1 (MQ=255) tAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAtct > 2:4347608/1‑150 (MQ=255) aaaaaaaaGCCCCGGCATCACTGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAtctc > 1:3019454/1‑150 (MQ=39) aaaaaaaaGCCCCGGCATCACTGCCGGGGC‑TTTGTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAtctc > 1:2321804/1‑150 (MQ=39) aaaaCAACGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAAtctc < 2:2951903/150‑1 (MQ=255) aaCAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCtt > 2:2205350/1‑150 (MQ=255) aaCAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCtt < 2:5189220/150‑1 (MQ=255) aaGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCAc < 1:5354619/150‑1 (MQ=255) gCCCCGGCCGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACC‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCCCGCC‑TTTTCGTCCAGGCTCTGGGCGGAAATCTCTTCCACCGa > 2:239314/1‑150 (MQ=255) gCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCg > 1:1529334/1‑150 (MQ=255) ccccGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTc > 2:3592285/1‑67 (MQ=255) ccccGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTc < 1:3592285/67‑1 (MQ=255) ccccGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGa > 1:2791576/1‑150 (MQ=255) gCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAAt > 2:2535954/1‑150 (MQ=255) aGTGATGCCGGGGC‑ATTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGc < 1:1796973/150‑1 (MQ=255) tGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTTGCGGAAATCTCTTCCACCGAAAAATGCGt > 1:1887338/1‑150 (MQ=255) tGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGt < 1:3180660/150‑1 (MQ=255) tGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGt < 1:336748/150‑1 (MQ=255) tGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGt < 2:1088552/150‑1 (MQ=255) tGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGt < 1:4914773/150‑1 (MQ=255) tGATGCCGGGGC‑TTTTTTTTGTATGCCGGGGCGGGCCATTTCGCGGGTGAACCCGCCCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGt < 1:3513597/150‑1 (MQ=255) tGATGCCGGGGC‑TTTTTTTTGTAGGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTCCA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGt < 2:2120610/150‑1 (MQ=255) tGATGCCGGGGC‑ATTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGt < 2:1719221/150‑1 (MQ=255) aTGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTTAACCCGCTCCTACA‑GGGGGGGCGGGGCGGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCATACACCGAAAAATGCGTgg > 1:207319/1‑150 (MQ=255) aTGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGTgg > 2:2336571/1‑150 (MQ=255) | ATGCTCGACGACCTGCGCAATGCCACGGGCACTGACTATGCGATGTACGCGGTGGCCAACCGCGAGCTGGTCGACCTGGCCATGAGCGGGCAGGCAGCGGTGGTGCCGTCCTGAGCCTTGTAGTGAGGTAAAACAAAGCCCCGGCAGTGATGCCGGGGC‑TTTTTTTTGTATGCCTGGGCGGGCCATTTCGCGGGTGAACCCGCTCCTACA‑GGGGGGGCGGGGCTGTTACTTGAACCGTCTCTCCACGCCTTTTTCGACCAGGATCTTGGCGGAAATCTCTTCCACCGAAAAATGCGTGG > NC_002947/2373900‑2374198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |