| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,391,250 | A→G | 5.4% | H49R (CAC→CGC) | rlmKL → | 23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,391,250 | 0 | A | G | 5.4% | 471.2 / 9.7 | 148 | H49R (CAC→CGC) | rlmKL | 23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (76/63); new base G (2/6); total (79/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.10e-01 | |||||||||||
Only 100 of 152 total aligned reads displayed.
GATGCGTCGCCCCGTCAGTCAAATAGCCCAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGACCTTTACGACGGTGTGCACGCGGTC > NC_002947/2391104‑2391395 | gATGCGTCGCCCCGTCAGTCAAATAGCCCAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCacac > 1:1799588/1‑150 (MQ=255)gATGCGTCGCCCCGTCAGTCAAATAGCCCAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCacac > 1:1799583/1‑150 (MQ=255) tCGCCCCGTCAGTCAAATAGCCCAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGCCGAGGTGTGCTCGCGCACCTCgtc < 2:3994313/150‑3 (MQ=255) gCCCCGTCAGTCAAATAGCCCAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGGAGAGGCCAAGGGCCTCGGCCTTGCCGAGGTGTGCTCGCGCACCTCgtcaa < 2:2394562/150‑5 (MQ=255) gCCCCGTCAGTCAAATAGCCCAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGCCGAGGTGTGCTCGCGCACCTCgtcaa < 1:2732126/150‑5 (MQ=255) gtcagtcaAATAGCCCAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑Tc‑gc > 1:913786/1‑150 (MQ=255) gCCCAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGAc < 2:494527/150‑1 (MQ=255) cccAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACa < 1:4691835/150‑1 (MQ=255) cccAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACa > 2:1508364/1‑150 (MQ=255) ccAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGTCGAGGTGCGCGAGCACACCTCGGCCATGTCGGCGGcgccgcgaat < 1:4150757/150‑5 (MQ=255) cAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATg > 1:5188795/1‑150 (MQ=255) cAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATg > 2:5358187/1‑150 (MQ=255) cAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATg > 2:3683752/1‑150 (MQ=255) cAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATg > 1:225115/1‑150 (MQ=255) aGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGa < 2:1692637/150‑1 (MQ=255) gcTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACt < 2:3137538/150‑1 (MQ=255) cTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTg < 2:3140637/150‑1 (MQ=255) aaTACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCCCACCTCGGCCCT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTa > 1:4795219/1‑150 (MQ=255) aaTACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTa > 1:3864744/1‑150 (MQ=255) tCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAATAGGACAAGGGACTCGGCCTTGACGAGGTGCGCGAGCACACATCGGCCAT‑TC‑GCGGCGCCGCCGACATTCAAACAGCTTACCGcc > 2:2407342/1‑150 (MQ=255) tCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGcc > 2:1236239/1‑150 (MQ=255) tCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGcc > 2:2438578/1‑150 (MQ=255) tCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGcc > 2:740120/1‑150 (MQ=255) tCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCGTACCGcc > 1:4048351/1‑150 (MQ=255) tCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCACAAAGGCCTTGAAAGCCTGCTCGACGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACAAGGAAACTGCTTACCGcc > 2:4787146/1‑150 (MQ=255) tCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCacac > 1:91787/1‑101 (MQ=255) tCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCacac < 2:91787/101‑1 (MQ=255) tCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCtgtgt < 2:1461698/150‑1 (MQ=255) tCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCtgtgt < 2:4209083/150‑1 (MQ=255) ggACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCtgtgtgg > 1:4905927/1‑149 (MQ=255) ggACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCtgtgtgg > 1:4905561/1‑149 (MQ=255) ggACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTgtgtgt > 2:1772465/1‑150 (MQ=255) ggACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTgtgtgt > 2:3687270/1‑150 (MQ=255) ccGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTg > 2:4296958/1‑150 (MQ=255) cGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCtgt < 2:3551241/142‑1 (MQ=255) cGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCtgt > 1:3551241/1‑142 (MQ=255) tttCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTc > 1:4592070/1‑150 (MQ=255) tttCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTc > 1:1850910/1‑150 (MQ=255) tttCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTc < 2:1850910/150‑1 (MQ=255) tttCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTc < 2:4592070/150‑1 (MQ=255) ttCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCa > 2:3028966/1‑150 (MQ=255) tCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCAc < 2:2116245/150‑1 (MQ=255) cGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACg > 1:2562906/1‑150 (MQ=255) gAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGTGCTCGCGCACCTCgtca < 2:2878386/96‑4 (MQ=38) gAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGTGCTCGCGCACCTCgtca > 1:2878386/1‑93 (MQ=38) gAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGt > 1:1056843/1‑150 (MQ=255) aaCTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTc > 1:3884179/1‑150 (MQ=255) cTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAATGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTg > 2:2223712/1‑150 (MQ=255) tttACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTgg > 2:681248/1‑150 (MQ=255) tttACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTgg > 1:1590426/1‑150 (MQ=255) cTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCt < 2:4617691/120‑1 (MQ=255) cTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGt > 2:2478783/1‑150 (MQ=255) tGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTa < 2:4590742/150‑1 (MQ=255) cAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑Tc‑gcg < 1:242111/83‑1 (MQ=255) cAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑Tc‑gcg > 2:242111/1‑83 (MQ=255) cAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCt > 2:322038/1‑150 (MQ=255) cAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCAGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCt > 1:2495696/1‑150 (MQ=255) aaaGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTg > 1:1303214/1‑150 (MQ=255) aaaGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTg < 1:4296958/150‑1 (MQ=255) aaaGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATAGCTg > 2:2265942/1‑150 (MQ=255) aGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGt < 1:217553/150‑1 (MQ=255) gCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGc < 2:1863044/150‑1 (MQ=255) cTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTc > 2:4665850/1‑150 (MQ=255) cTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTc > 2:1468886/1‑150 (MQ=255) cTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTc > 1:1204/1‑150 (MQ=255) ttGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCa > 2:3561497/1‑150 (MQ=255) gAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTg > 1:5278565/1‑113 (MQ=255) gAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTg < 2:5278565/113‑1 (MQ=255) gAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAg > 1:1049849/1‑150 (MQ=255) gAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAG‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAg > 2:384943/1‑150 (MQ=255) gCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCt < 1:4137688/150‑1 (MQ=255) gCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCt < 1:4292517/150‑1 (MQ=255) tGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTtct < 2:4816942/150‑1 (MQ=255) gCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTtctc > 1:59017/1‑150 (MQ=255) cTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACCCCTCGGCCAT‑TA‑GCGGCGCCGCCGACATGGATACTGCTTACCGCATGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCg < 1:1871277/150‑1 (MQ=255) tCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGa < 2:2824437/150‑1 (MQ=255) tCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGa > 2:104317/1‑150 (MQ=255) tCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGa < 2:117904/150‑1 (MQ=255) agGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACg > 1:539632/1‑150 (MQ=255) ggCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGc < 2:5122852/150‑1 (MQ=255) gCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGcc > 1:353178/1‑150 (MQ=255) gCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGcc > 1:1402934/1‑150 (MQ=255) gCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGcc > 2:214941/1‑150 (MQ=255) aaGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCcgac < 2:1590426/150‑1 (MQ=255) gCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGAcc > 2:1485317/1‑150 (MQ=255) cTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGACCtt < 1:1474552/150‑1 (MQ=255) tCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCATACCGCCAGTGTGTCTGGTCACGTCTGGCCAACCCCGTATTGCTGGTGCTCAAGCGCTACTCGATGAAGAACGCCGACGAccaat > 2:1154655/1‑147 (MQ=255) cGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGACCTTTa < 1:1625465/150‑1 (MQ=255) ccTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGACCTTTacga < 1:1485317/150‑1 (MQ=255) ccTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGACCTTTacga < 2:1056843/150‑1 (MQ=255) ttGACGTGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATTAAGAACGCCGACGACCTTTacgacg < 1:2971042/150‑1 (MQ=255) aCGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGACCTTTACGACGgtg < 1:3239650/150‑1 (MQ=255) cGAGGTGTGCTCGCGCACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTgg < 1:2462957/101‑1 (MQ=255) cGAGGTGTGCTCGCGCACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTgg > 2:2462957/1‑101 (MQ=255) aGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGTGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGACCTTTACGACGGTGTGc < 2:2796043/150‑1 (MQ=255) aGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGACCTTTACGACGGTGTGc < 1:2438578/150‑1 (MQ=255) ggTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGACCTTTACGACGGTGTGCa > 1:4348546/1‑150 (MQ=255) gcgcGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGACCTTTACGACGGTGTGCAcgc < 1:1212976/150‑1 (MQ=255) gcgAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGACCTTTACGACGGTGTGCACGCgg < 2:1799583/150‑1 (MQ=255) gAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGACCTTTACGACGGTGTGCACGCGGTc > 1:3758855/1‑150 (MQ=255) | GATGCGTCGCCCCGTCAGTCAAATAGCCCAAGGCGCTGGAATACTCATGTCGGACCGTTTCGAACTTTACCTCACCTGTCCCAAAGGCCTTGAAAGCCTGCTCGCCGAAGAGGCCAAGGGCCTCGGCCTTGACGAGGTGCGCGAGCACACCTCGGCCAT‑TC‑GCGGCGCCGCCGACATGGAAACTGCTTACCGCCTGTGTGTCTGGTCACGTCTGGCCAACCGCGTATTGCTGGTGCTCAAGCGCTTCTCGATGAAGAACGCCGACGACCTTTACGACGGTGTGCACGCGGTC > NC_002947/2391104‑2391395 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |