| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,410,625 | C→G | 9.1% | intergenic (‑96/+46) | PP_2111 ← / ← acnA‑I | aerotaxis receptor/aconitate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,410,625 | 0 | C | G | 9.1% | 351.2 / 20.7 | 110 | intergenic (‑96/+46) | PP_2111/acnA‑I | aerotaxis receptor/aconitate hydratase |
| Reads supporting (aligned to +/- strand): ref base C (53/47); new base G (5/5); total (58/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
Only 100 of 118 total aligned reads displayed.
TGCTGGGCTGGGAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCAATCCGGCATAGCACCTCGATCTGTT > NC_002947/2410477‑2410774 | tgctgGGCTGGGAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑ccc > 1:4911373/1‑150 (MQ=255) gctgggctggGAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑cccc < 1:4986035/150‑1 (MQ=255) tgggctgggAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTTATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCcg > 1:4692938/1‑150 (MQ=255) tgggctgggAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCcg > 1:1026133/1‑150 (MQ=255) ggctgggAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCcgcg < 2:2497618/150‑1 (MQ=255) ctgggAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCgcggc < 1:575299/150‑1 (MQ=255) ctgggAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCgcggc < 1:575204/150‑1 (MQ=255) ctgggAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCgcggc > 2:4776160/1‑150 (MQ=255) ggAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGACCGAGCGCCG‑CGGGGGCGGCGCt < 2:4962619/150‑1 (MQ=255) aaaGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCg < 2:409476/150‑1 (MQ=255) aaGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCgg < 2:1537840/150‑1 (MQ=255) aaGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCgg < 1:5348724/150‑1 (MQ=255) aGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGt < 2:1147080/150‑1 (MQ=255) tCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGttt > 2:113102/1‑150 (MQ=255) ccGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCGCCCCCCGCGGCGCTCGGttt > 1:4679158/1‑150 (MQ=255) cGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCa < 2:5260869/150‑1 (MQ=255) cGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGACCGAGCGCCG‑CGGGGGCGGCGCTCgatctct < 2:876065/150‑7 (MQ=255) tctctGGTTAATCGGCTGTTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGTTTTTATTCAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAgaac < 1:970165/150‑1 (MQ=255) tctGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAgaacgg > 1:3289596/1‑150 (MQ=255) tctGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAgaacgg > 2:4019786/1‑150 (MQ=255) gTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGa > 2:3371397/1‑150 (MQ=255) gTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGa > 1:3983715/1‑150 (MQ=255) ggCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTc < 2:933831/150‑1 (MQ=255) gCTGGTTGTCACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCg > 1:3732416/1‑150 (MQ=255) gttgttACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCCAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCa < 2:1061888/150‑1 (MQ=255) gttACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGAc < 2:2553425/150‑1 (MQ=255) gttACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGAc > 1:3345306/1‑150 (MQ=255) ttACGCATGGGTGATAGTCCGCAGGTCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACt > 1:1706831/1‑150 (MQ=255) ttACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCa < 2:3948400/123‑1 (MQ=255) ttACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCa > 1:3948400/1‑123 (MQ=255) tACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTc < 1:2888674/121‑1 (MQ=255) tACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTc > 2:2888674/1‑121 (MQ=255) tACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTc < 2:5210471/150‑1 (MQ=255) tACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTc < 1:4811508/150‑1 (MQ=255) tACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTc < 1:4045993/150‑1 (MQ=255) tACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTc < 1:4032941/150‑1 (MQ=255) tACGCATGGGTGATAGACCGCAGGGCTTACGACAGGTATCGGCAAGCGGCTGGTTTTATATAATGGATATTTCATACATTCATTGCACAGATCCAGCGCCG‑CCCCCCCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGAcac < 1:695633/150‑3 (MQ=255) gCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCgg > 2:2026361/1‑139 (MQ=255) gCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCgg < 1:2026361/139‑1 (MQ=255) gCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAAc > 2:422333/1‑150 (MQ=255) gCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGAAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAAc > 1:1279862/1‑150 (MQ=255) aTGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCGAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACAGAACGAATCTTCGGCCAGACTCAACTg < 1:1928142/150‑1 (MQ=255) gTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATTTTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCACCTGGCGa < 2:3910316/150‑1 (MQ=255) gTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGa > 2:5221585/1‑150 (MQ=255) gTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGa > 1:792117/1‑150 (MQ=255) tGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGat > 1:938540/1‑150 (MQ=255) aGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGatcatc < 2:45540/150‑1 (MQ=255) gTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCt < 1:5221585/150‑1 (MQ=255) cGCAGGGCTTTCGACAGGTATCGGCGAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGgc < 2:2804228/150‑1 (MQ=255) ggCTTTCGTCAGGTATGGGCAAGGGGGTGGTTTTATTGAATGGATATTTGATTCATTGATTGGAGAGATGGTGCGGCG‑CCCGCGGGGGGGTCGGTTTCATGTAGGGAACGAATGTTCGGGCTGAGTCATCTGGGGTTCTTCTGGCGCTac > 2:4812709/1‑150 (MQ=255) ggCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAac > 1:282968/1‑150 (MQ=255) tttCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGACCGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAAcaca > 1:3386229/1‑150 (MQ=255) tttCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAAcaca < 2:5164365/150‑1 (MQ=255) aCAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATg > 1:1034062/1‑150 (MQ=255) gTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGa > 2:4049687/1‑150 (MQ=255) gTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGa < 1:5223956/150‑1 (MQ=255) gTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGa < 1:5223998/150‑1 (MQ=255) gCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑cccc > 2:1795530/1‑150 (MQ=255) cAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑ccccc < 1:709462/150‑1 (MQ=255) ggCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGcc < 2:4809886/150‑1 (MQ=255) gCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCt < 1:397420/150‑1 (MQ=255) gTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGaa < 2:830096/150‑1 (MQ=255) gTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGaa < 1:4145523/150‑1 (MQ=255) ttttATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAg > 2:277985/1‑150 (MQ=255) ttttATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAg > 2:278141/1‑150 (MQ=255) tttATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGt > 1:3547518/1‑150 (MQ=255) ttATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTa > 1:3469130/1‑150 (MQ=255) ttATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTa > 1:3469137/1‑150 (MQ=255) tGAATGGATATTTGAAACATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCCGATTCAAGAAAGGAACGAATCTTCTTCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTcc > 2:3284940/1‑150 (MQ=255) aaTGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCa > 2:1442572/1‑122 (MQ=255) aaTGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAATCCCCCCCCGCCTTGAAGTATTCCa > 1:1515290/1‑150 (MQ=255) tGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCt > 2:1633075/1‑150 (MQ=255) ggATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTc > 1:2649695/1‑150 (MQ=255) atatTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCATGAACGGAAGGAATCTTCGGCGAGACTCAACTGGCGATGATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGTTGTATTACACCTGGt > 2:746429/1‑150 (MQ=255) ttGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAg < 2:1026133/150‑1 (MQ=255) tGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAgg < 2:1146503/150‑1 (MQ=255) tGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAgg < 2:3289596/150‑1 (MQ=255) gATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAggg > 2:1392348/1‑150 (MQ=255) gATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAggg < 2:3080182/150‑1 (MQ=255) aTTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGt < 2:4034185/150‑1 (MQ=255) cATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAATCCCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTAt > 2:5114614/1‑150 (MQ=255) attgattgCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑‑CCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCaa > 2:4517619/1‑150 (MQ=255) attgCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCAATcc < 2:848502/150‑1 (MQ=255) ttgaaaccGAGCGCCG‑CGGGGGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑ACCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCAATCCGGCa > 1:1537852/8‑150 (MQ=255) cAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCAATCCGGCa > 2:4305835/1‑150 (MQ=255) agagATCTAGCGCCG‑CCCACGCGGCGCTCGGTTACAAGAACGGAACGAATCTTCGGCCACACTAAACTGGCGATCAACTGGCGCAACACATACTGCAGAAA‑CCCCCCCGCCTTGAAGTATTCCAACTCCTTCATGGTATCAATCCGGCAt > 2:1090931/1‑150 (MQ=255) gagaTCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCAATCCGGCATa > 1:111072/1‑150 (MQ=255) aaccGAGCGCCG‑CGGGGGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGgc < 2:5354971/76‑1 (MQ=37) aaccGAGCGCCG‑CGGGGGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGgc > 1:5354971/4‑79 (MQ=37) aaccGAGCGCCG‑CGGGGGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑cc > 2:1527029/4‑100 (MQ=38) aaccGAGCGCCG‑CGGGGGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑cc < 1:1527029/97‑1 (MQ=38) cGAGCGCCG‑CGGGGGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCAATCCGGCATAGCAcc > 2:4856477/1‑150 (MQ=255) gAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCa < 2:1357523/117‑1 (MQ=255) gAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCa > 1:1357523/1‑117 (MQ=255) gcgcCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCAATCCGGCATAGCACCTCg > 2:2084122/1‑150 (MQ=255) cgccg‑cCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCAATCCGGCATAGCACCTCGa < 1:113102/150‑1 (MQ=255) ccg‑ccCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCAATCCGGCATAGCACCTCGATc > 1:4442915/1‑150 (MQ=255) cg‑ccCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCAATCCGGCATAGCACCTCGATCt < 2:1282734/150‑1 (MQ=255) cccccGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCAATCCGGCATAGCACCTCGATCTGt < 2:4679158/150‑1 (MQ=255) ccccGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCAATCCGGCATAGCACCTCGATCTGtt > 2:2928293/1‑150 (MQ=255) | TGCTGGGCTGGGAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATGGGTGATAGTCCGCAGGGCTTTCGACAGGTATCGGCAAGCGGCTGGTTTTATTGAATGGATATTTGATTCATTGATTGCAGAGATCGAGCGCCG‑CCCCCGCGGCGCTCGGTTTCAAGAACGGAACGAATCTTCGGCCAGACTCAACTGGCGATCATCTGGCGCAACACATAATGCAGAAT‑CCCCCCCGCCTTGAAGTATTCCACCTCGTTCAGGGTATCAATCCGGCATAGCACCTCGATCTGTT > NC_002947/2410477‑2410774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |