| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,476,119 | A→G | 19.0% | intergenic (‑59/+121) | PP_2167 ← / ← tal | PhoD‑like phosphatase/transaldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,476,119 | 0 | A | G | 19.0% | 190.2 / 41.2 | 106 | intergenic (‑59/+121) | PP_2167/tal | PhoD‑like phosphatase/transaldolase |
| Reads supporting (aligned to +/- strand): ref base A (31/44); new base G (10/9); total (44/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.42e-02 | |||||||||||
Only 100 of 115 total aligned reads displayed.
TAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAA > NC_002947/2475970‑2476268 | tAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCa < 1:4907415/150‑1 (MQ=255)tAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCa < 1:1508655/150‑1 (MQ=255)tAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCa < 1:4998135/150‑1 (MQ=255) gTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAgt < 2:245754/150‑1 (MQ=255) gACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAgtgt < 2:1804012/150‑1 (MQ=255) aCGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCCCCCTTACAACCATAAgtgtt > 2:3634261/1‑149 (MQ=255) cGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCTGGCAAGCCCGCCCTTACATCGATCAGTGTAg < 1:4053411/150‑1 (MQ=255) cGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAg < 1:2561880/150‑1 (MQ=255) ccagacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTaagggc < 2:4724573/150‑6 (MQ=38) ccagacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTaagggc < 2:3410096/150‑6 (MQ=38) ccagacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGa < 2:3838232/148‑1 (MQ=255) ccagacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGa > 1:3838232/1‑148 (MQ=255) cagacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑g < 2:1637732/150‑1 (MQ=255) agacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑gg < 1:824859/150‑1 (MQ=37) gacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑ggg < 2:3961996/150‑1 (MQ=255) gacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCGTACATCGATCAGTGTAGGAGC‑ggg > 2:3912342/1‑150 (MQ=255) ggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCtt < 2:5035141/150‑1 (MQ=255) gccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTg < 1:3222048/150‑1 (MQ=255) gccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTg < 2:4056809/150‑1 (MQ=255) tgcgccgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTCGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCATACATCGATCAGTGTAGGAGC‑GGGCtttc > 2:4854726/6‑148 (MQ=255) gCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGa > 2:439719/1‑150 (MQ=255) cTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACTAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGaa < 2:2445760/150‑1 (MQ=255) ggggTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACa < 2:313610/150‑1 (MQ=255) ctggcggcGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCga < 2:4151636/148‑1 (MQ=255) cAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCga < 1:439719/150‑1 (MQ=255) cAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCCCCCATACATAGATCAGTGTTGGGGC‑GGGCTTGCCCCCGAACAGGCCCgc > 1:3166605/1‑149 (MQ=39) aGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑gg < 1:691937/127‑1 (MQ=25) aGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑gg > 2:691937/1‑127 (MQ=25) aGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGGTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCCAGCCCGCCCGTGCAGCGATCCGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCgag > 2:3431727/1‑150 (MQ=39) cggcgCAGTACCGGGCCGGCTAGAACGTGGGGCACGGGGTTTGGGTAGTTCATCGACCGCTCGGGTGGCTTTGGGGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCCGTGTAGGTGG‑GGGCTTGCCCGCGAACAGGCCCGAGAAt < 1:309283/150‑1 (MQ=37) cggcgCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTTGGGGAGGTCATCGACAGCTCGGGTGGATATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAAt < 1:1316505/150‑1 (MQ=255) ggcgCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCACGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAAtt < 2:662315/150‑1 (MQ=255) ggcgCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCCGGGTAGGAGC‑GGACTTGCCCGCGAACAGGCCCGAGAAtt > 2:4492062/1‑150 (MQ=255) gCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑ggg < 2:4948218/111‑1 (MQ=21) gCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑ggg > 1:4948218/1‑111 (MQ=21) gggCGATAACGCGGGGCACGGGGTTTGGGGTGGTCCTCGACAGCTGGGGTGGCTTTGGGGGCGTGTTCGGGGGCAAGCCCGCCCTTACTTCGTTCCGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAg < 1:4710415/149‑1 (MQ=255) cGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCGGCGAACAGGCCCGAGAATTCAATACACAACTAAg < 1:843921/150‑1 (MQ=255) gCGAGAAGGCGGGGAAAGGGGTTTGGGGCGTTCATCGACAGCTCGGGTGGCTTGGGCGGCCTGTTCGCGGGCACGCCCGCCCTTACATCGATCTGTGTAGGAGG‑GGGGTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGc < 1:5170649/150‑1 (MQ=255) taaCGAGGGGCATCGGGTTTGGTGTGGTCATCGACTGCTCGGGTGGCTTTGGCGGCCTGTTGGCGGGCAAGCCCGCCCTTACATCTATCAGTGTTGTAGC‑GGGCTTTCCCGCGAACAGGCACGAGAATTCTATTCACAACTAAGGCGTgg < 1:3634261/149‑1 (MQ=255) gAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCATACAACGATAAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACAAAGGCGTGGcaaa > 2:1739286/1‑150 (MQ=255) gAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCCCCCATACATCGATCAGTGTAGGAGC‑CGGCTTGCCCGCGAACAGGCCCCAGAATTCAAAACACAACAAAGGCGTGGcaaa > 2:3909593/1‑150 (MQ=255) gggTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTGGCGGGGAAGCCCGCCCATAGATAGGTGAGTGTAGGTGC‑GGGGTTTGCCGCGAACAGGCCCGAGAATTGAATAAACAACGAATGGGTGGGGAACAAAAAgggg > 2:2078734/1‑149 (MQ=255) gggTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGc < 2:1473809/150‑1 (MQ=255) gggTTAGGGGAGGTCATCGACAGCTCGGGGGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGc < 2:1473860/150‑1 (MQ=255) gTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGa > 1:4761847/1‑82 (MQ=255) gTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGa < 2:4761847/82‑1 (MQ=255) ggggAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGaaaa < 2:46301/150‑1 (MQ=255) cggTCATCTACAGCTGGGGTGGCTATGGCGGCCTGTTCGCGGGAAAGCCCGCCCTTACATCGATCCGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACt < 1:4249221/149‑1 (MQ=255) aGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACt < 1:5126431/150‑1 (MQ=255) ggTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCACGCCCGCCCTTACATCGATCCGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTg < 1:2466895/150‑1 (MQ=255) tCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGaa < 1:351841/150‑1 (MQ=255) tCATCGACAGCCCGGTTGGCTATGGCGGCCGGTTCGCGGGCACGCCCGCCCTTACAACGTTCAGTGTAGGAGC‑TGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGac < 1:1473150/150‑2 (MQ=255) tCGACAGCTGGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCCGTGTAGGAGC‑GGGCTGGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAacac < 1:1914914/150‑1 (MQ=255) aCAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCa > 2:824014/1‑57 (MQ=255) aCAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCa < 1:824014/57‑1 (MQ=255) aCAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCa < 1:823944/57‑1 (MQ=255) aCAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCa > 2:823944/1‑57 (MQ=255) aCAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTc < 2:2846016/150‑1 (MQ=255) aCAGCTCGGGTGGCTATGGCGGCCGGTTGGCGGGCAACACCCCCCATAAAAAGTTGAGTGTTGGTGCGGGGGTTGCCC‑CGGACAGGCCCCGGAAATAAAAAAACAAATAATGCGTGGGCAAAAAAAAGGGCGGGAAATAAAGAacacata > 2:602023/1‑147 (MQ=255) gCTCGGGTGGCTATGGCGGCCAGTTAGCGGGCAAGCCCGCCCGTACCTCGATCCGTGTAGGAGC‑GGGCGTGCCCGCGCACAGGCCCGCGAAGTCAATACACAACGAAGGCGTGGCAAACAAAACCGGCGGAAAATACTGAACACTTcccc > 2:354832/1‑149 (MQ=255) ggTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCCGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGt < 1:2616121/150‑1 (MQ=255) ggTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGt < 1:2616145/150‑1 (MQ=255) tGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCa < 1:392758/150‑1 (MQ=255) tGGCGGCCTGTTCGGGGGCAAGCCCGCCCTAACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATTCACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCtaa < 1:5144307/150‑1 (MQ=255) tGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCaaa < 1:404126/150‑1 (MQ=255) ggccgtttCGGGGGCATGCCTGCCATTACATCGATCATTGTAGGAGG‑GGGCTTGCCCGCGATCAGGCCCGAGAATTCAATCCACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACg < 1:2797329/144‑1 (MQ=255) cTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGGGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCCCCCGTCAGGCAAACACGAAc > 1:1713038/1‑150 (MQ=255) taagggcgGGCTTGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACt > 1:3572781/6‑150 (MQ=255) tGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACt > 1:3629407/1‑150 (MQ=255) cgcgGGCAAGCCCGCCCTTACATCGATCGGGGTAGGAGG‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTAt < 1:4723282/150‑1 (MQ=255) gcgGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATc > 2:136946/1‑150 (MQ=255) gggCAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAg > 1:4861520/1‑150 (MQ=37) gggCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAg > 2:880709/1‑150 (MQ=255) gggCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAg > 2:1003591/1‑150 (MQ=255) ggCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAgg > 1:5088683/1‑150 (MQ=255) cAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAATCAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAAATGTATCAGGcg > 2:4357780/1‑149 (MQ=25) cAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGcc > 2:1937154/1‑150 (MQ=255) aaGCCCGCTCCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCt > 1:2077269/1‑150 (MQ=37) aaGCCCGCTCCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCt > 1:3340700/1‑150 (MQ=37) gcccgctcCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCttt > 1:327210/1‑150 (MQ=37) gcccgctcCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCttt > 1:5165406/1‑150 (MQ=37) cccgctcCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCa > 2:4581596/1‑142 (MQ=37) cccgctcCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCa < 1:4581596/142‑1 (MQ=37) cccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCtttt > 1:3293917/1‑150 (MQ=255) ccgcccTTACATCGATCCGTGTAGGCGC‑GGGCTGGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc < 1:4553738/150‑1 (MQ=255) ccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTgg < 1:1290637/78‑1 (MQ=255) ccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTgg > 2:1290637/1‑78 (MQ=255) ccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc < 2:2367430/150‑1 (MQ=255) ccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc > 2:5042832/1‑150 (MQ=255) ccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc > 1:328249/1‑150 (MQ=255) ccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc > 1:3670597/1‑150 (MQ=255) cgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCa < 2:2355197/150‑1 (MQ=255) cgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCa < 1:2941217/150‑1 (MQ=255) cgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCa < 2:4608703/150‑1 (MQ=255) cTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTa > 2:3962736/1‑150 (MQ=255) ttaccccGATCAGTGTAGGAGC‑GGGCGGGCCCGCGAACAGGCCCGAGAATTCAATACCCAACTAAGGCGTGGCAAACAAAACGGGCGGAATATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGTCCTTTTCAGCTAt < 2:4065880/144‑1 (MQ=255) aTCGATCAGTGTAGGAGC‑GGGCTAGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAAc > 2:4761409/1‑150 (MQ=255) aTCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTtct > 1:4415587/1‑150 (MQ=255) tCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTtctc > 2:3590010/1‑150 (MQ=255) aGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCaa < 1:4854726/150‑1 (MQ=255) | TAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAA > NC_002947/2475970‑2476268 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |