| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,476,127 | A→G | 18.6% | intergenic (‑67/+113) | PP_2167 ← / ← tal | PhoD‑like phosphatase/transaldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,476,127 | 0 | A | G | 18.6% | 226.4 / 38.4 | 107 | intergenic (‑67/+113) | PP_2167/tal | PhoD‑like phosphatase/transaldolase |
| Reads supporting (aligned to +/- strand): ref base A (34/50); new base G (12/7); total (48/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.08e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
CCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTC > NC_002947/2475980‑2476275 | ccagacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGa > 1:3838232/1‑148 (MQ=255)ccagacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGa < 2:3838232/148‑1 (MQ=255) cagacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑g < 2:1637732/150‑1 (MQ=255) agacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑gg < 1:824859/150‑1 (MQ=37) gacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑ggg < 2:3961996/150‑1 (MQ=255) gacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCGTACATCGATCAGTGTAGGAGC‑ggg > 2:3912342/1‑150 (MQ=255) acggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGc < 2:1363883/150‑1 (MQ=255) ggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑GGGCtt < 1:49318/150‑1 (MQ=37) ggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCtt < 2:5035141/150‑1 (MQ=255) gccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTg < 2:4056809/150‑1 (MQ=255) gccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTg < 1:3222048/150‑1 (MQ=255) tgcgccgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTCGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCATACATCGATCAGTGTAGGAGC‑GGGCtttc > 2:4854726/6‑148 (MQ=255) gCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGa > 2:439719/1‑150 (MQ=255) cTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACTAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGaa < 2:2445760/150‑1 (MQ=255) ggggTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACa < 2:313610/150‑1 (MQ=255) cAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCga < 1:439719/150‑1 (MQ=255) cAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCCCCCATACATAGATCAGTGTTGGGGC‑GGGCTTGCCCCCGAACAGGCCCgc > 1:3166605/1‑149 (MQ=39) aGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑gg < 1:691937/127‑1 (MQ=25) aGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑gg > 2:691937/1‑127 (MQ=25) aGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGGTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCCAGCCCGCCCGTGCAGCGATCCGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCgag > 2:3431727/1‑150 (MQ=39) cggcgCAGTACCGGGCCGGCTAGAACGTGGGGCACGGGGTTTGGGTAGTTCATCGACCGCTCGGGTGGCTTTGGGGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCCGTGTAGGTGG‑GGGCTTGCCCGCGAACAGGCCCGAGAAt < 1:309283/150‑1 (MQ=37) cggcgCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTTGGGGAGGTCATCGACAGCTCGGGTGGATATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAAt < 1:1316505/150‑1 (MQ=255) ggcgCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCACGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAAtt < 2:662315/150‑1 (MQ=255) ggcgCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCCGGGTAGGAGC‑GGACTTGCCCGCGAACAGGCCCGAGAAtt > 2:4492062/1‑150 (MQ=255) ataGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGATATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCTATCTGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCaa < 1:2133566/148‑1 (MQ=255) gCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑ggg > 1:4948218/1‑111 (MQ=21) gCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑ggg < 2:4948218/111‑1 (MQ=21) gggCGATAACGCGGGGCACGGGGTTTGGGGTGGTCCTCGACAGCTGGGGTGGCTTTGGGGGCGTGTTCGGGGGCAAGCCCGCCCTTACTTCGTTCCGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAg < 1:4710415/149‑1 (MQ=255) cGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCGGCGAACAGGCCCGAGAATTCAATACACAACTAAg < 1:843921/150‑1 (MQ=255) gCGAGAAGGCGGGGAAAGGGGTTTGGGGCGTTCATCGACAGCTCGGGTGGCTTGGGCGGCCTGTTCGCGGGCACGCCCGCCCTTACATCGATCTGTGTAGGAGG‑GGGGTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGc < 1:5170649/150‑1 (MQ=255) gCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCGGTTCGCGGGCCAGCCCCCCCCTACAACGAGCAGTGTAGGGGC‑GGGCGTGCCCGCGCACACGCCCCCGAAATAAAAAAACCACAAAGGc > 2:1914914/1‑150 (MQ=255) gagaACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGt < 1:3126003/150‑1 (MQ=255) agaACGTGGGGCAACGGGTTAGGGGAGGTAATCGACAGCTCGGGTGGATATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTg < 1:3431727/150‑1 (MQ=255) taaCGAGGGGCATCGGGTTTGGTGTGGTCATCGACTGCTCGGGTGGCTTTGGCGGCCTGTTGGCGGGCAAGCCCGCCCTTACATCTATCAGTGTTGTAGC‑GGGCTTTCCCGCGAACAGGCACGAGAATTCTATTCACAACTAAGGCGTgg < 1:3634261/149‑1 (MQ=255) gAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCATACAACGATAAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACAAAGGCGTGGcaaa > 2:1739286/1‑150 (MQ=255) gAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCCCCCATACATCGATCAGTGTAGGAGC‑CGGCTTGCCCGCGAACAGGCCCCAGAATTCAAAACACAACAAAGGCGTGGcaaa > 2:3909593/1‑150 (MQ=255) gggCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGcaaacaa < 1:4701352/150‑1 (MQ=255) gggTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTGGCGGGGAAGCCCGCCCATAGATAGGTGAGTGTAGGTGC‑GGGGTTTGCCGCGAACAGGCCCGAGAATTGAATAAACAACGAATGGGTGGGGAACAAAAAgggg > 2:2078734/1‑149 (MQ=255) gggTTAGGGGAGGTCATCGACAGCTCGGGGGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGc < 2:1473860/150‑1 (MQ=255) ggggAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGaaaa < 2:46301/150‑1 (MQ=255) cggTCATCTACAGCTGGGGTGGCTATGGCGGCCTGTTCGCGGGAAAGCCCGCCCTTACATCGATCCGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACt < 1:4249221/149‑1 (MQ=255) aGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACt < 1:5126431/150‑1 (MQ=255) ggTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCACGCCCGCCCTTACATCGATCCGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTg < 1:2466895/150‑1 (MQ=255) tCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGaa < 1:351841/150‑1 (MQ=255) tCATCGACAGCCCGGTTGGCTATGGCGGCCGGTTCGCGGGCACGCCCGCCCTTACAACGTTCAGTGTAGGAGC‑TGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGac < 1:1473150/150‑2 (MQ=255) tCGACAGCTGGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCCGTGTAGGAGC‑GGGCTGGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAacac < 1:1914914/150‑1 (MQ=255) aCAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTc < 2:2846016/150‑1 (MQ=255) aCAGCTCGGGTGGCTATGGCGGCCGGTTGGCGGGCAACACCCCCCATAAAAAGTTGAGTGTTGGTGCGGGGGTTGCCC‑CGGACAGGCCCCGGAAATAAAAAAACAAATAATGCGTGGGCAAAAAAAAGGGCGGGAAATAAAGAacacata > 2:602023/1‑147 (MQ=255) gCTCGGGTGGCTATGGCGGCCAGTTAGCGGGCAAGCCCGCCCGTACCTCGATCCGTGTAGGAGC‑GGGCGTGCCCGCGCACAGGCCCGCGAAGTCAATACACAACGAAGGCGTGGCAAACAAAACCGGCGGAAAATACTGAACACTTcccc > 2:354832/1‑149 (MQ=255) ggTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCCGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGt < 1:2616121/150‑1 (MQ=255) ggTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGt < 1:2616145/150‑1 (MQ=255) tGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCa < 1:392758/150‑1 (MQ=255) gCTATGGCGGCCTGTTCGCGGGAAAGCCCCCCCTTACAACCATCACTGTACGAGC‑GGCCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAACCCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAgc < 2:4649718/150‑2 (MQ=255) tGGCGGCCTGTTCGGGGGCAAGCCCGCCCTAACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATTCACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCtaa < 1:5144307/150‑1 (MQ=255) tGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCaaa < 1:404126/150‑1 (MQ=255) cTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGGGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCCCCCGTCAGGCAAACACGAAc > 1:1713038/1‑150 (MQ=255) taagggcgGGCTTGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACt > 1:3572781/6‑150 (MQ=255) tGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACt > 1:3629407/1‑150 (MQ=255) cgcgGGCAAGCCCGCCCTTACATCGATCGGGGTAGGAGG‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTAt < 1:4723282/150‑1 (MQ=255) gcgGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATc > 2:136946/1‑150 (MQ=255) cgGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCa < 2:5141987/150‑1 (MQ=255) gggCAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAg > 1:4861520/1‑150 (MQ=37) gggCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAg > 2:880709/1‑150 (MQ=255) gggCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAg > 2:1003591/1‑150 (MQ=255) ggCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAgg > 1:5088683/1‑150 (MQ=255) gCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACAAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGc > 2:3897097/1‑150 (MQ=255) cAAGCCCGCTCCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAATCAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAAATGTATCAGGcg > 2:4357780/1‑149 (MQ=25) cAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGcc > 2:1937154/1‑150 (MQ=255) aaGCCCGCTCCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCt > 1:2077269/1‑150 (MQ=37) aaGCCCGCTCCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCt > 1:3340700/1‑150 (MQ=37) aaGCCCGCTCCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCt > 2:4071752/1‑150 (MQ=37) gcccgctcCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCttt > 1:327210/1‑150 (MQ=37) gcccgctcCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCttt > 1:5165406/1‑150 (MQ=37) cccgctcCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCa > 2:4581596/1‑142 (MQ=37) cccgctcCTACACTGATCGATGTAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCa < 1:4581596/142‑1 (MQ=37) cccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCtttt > 1:3293917/1‑150 (MQ=255) cccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCtttt > 2:2941217/1‑150 (MQ=255) ccgcccTTACATCGATCCGTGTAGGCGC‑GGGCTGGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc < 1:4553738/150‑1 (MQ=255) ccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTgg < 1:1290637/78‑1 (MQ=255) ccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTgg > 2:1290637/1‑78 (MQ=255) ccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc > 2:5042832/1‑150 (MQ=255) ccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc > 1:328249/1‑150 (MQ=255) ccgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc > 1:3670597/1‑150 (MQ=255) cgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCa < 2:2355197/150‑1 (MQ=255) cgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCa < 1:2941217/150‑1 (MQ=255) cgcccTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCa < 2:4608703/150‑1 (MQ=255) cTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTa > 2:3962736/1‑150 (MQ=255) ttaccccGATCAGTGTAGGAGC‑GGGCGGGCCCGCGAACAGGCCCGAGAATTCAATACCCAACTAAGGCGTGGCAAACAAAACGGGCGGAATATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGTCCTTTTCAGCTAt < 2:4065880/144‑1 (MQ=255) aTCGATCAGTGTAGGAGC‑GGGCTAGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAAc > 2:4761409/1‑150 (MQ=255) aTCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTtct > 1:4415587/1‑150 (MQ=255) aGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCaa < 1:4854726/150‑1 (MQ=255) atgtAAGGGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAg < 2:2011894/149‑1 (MQ=255) tAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCtt > 2:4423452/1‑150 (MQ=255) tAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCtt > 2:2607348/1‑150 (MQ=255) tAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCtt > 2:2271162/1‑150 (MQ=255) gAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTc > 2:2862233/1‑150 (MQ=255) gAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTc > 2:1249799/1‑150 (MQ=255) gAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTc < 2:1037373/150‑1 (MQ=255) gAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTc > 2:2549529/1‑150 (MQ=255) gAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTc < 1:2862233/150‑1 (MQ=255) | CCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGC‑GGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTC > NC_002947/2475980‑2476275 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |