Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,510,742 G→A 5.2% S113L (TCG→TTG)  PP_2203 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,510,7420GA 5.2% 358.6 / 6.0 120S113L (TCG→TTG) PP_2203hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (60/51);  new base A (3/3);  total (63/57)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.34e-01

Only 100 of 125 total aligned reads displayed.

AGCGGTAGCAGGGTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGA  >  NC_002947/2510593‑2510889
                                                                                                                                                     |                                                                                                                                                   
aGCGGTAGCAGGGTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCg                                                                                                                                                     >  2:2645876/1‑150 (MQ=255)
aGCGGTAGCAGGGTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCg                                                                                                                                                     >  1:4932746/1‑150 (MQ=255)
aGCGGTAGCAGGGTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCg                                                                                                                                                     >  1:2172734/1‑150 (MQ=255)
 gCGGTAGCAGGGTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGa                                                                                                                                                    >  2:2628351/1‑150 (MQ=255)
       gCAGGGTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCAt                                                                                                                                              <  2:1064028/150‑1 (MQ=255)
       gCAGGGTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCAt                                                                                                                                              >  1:4982695/1‑150 (MQ=255)
         aGGGTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATgg                                                                                                                                            <  2:3827385/150‑1 (MQ=255)
         aGGGTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATgg                                                                                                                                            <  2:1072527/150‑1 (MQ=255)
         aGGGTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATgg                                                                                                                                            >  1:967732/1‑150 (MQ=255)
          gggTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATggg                                                                                                                                           >  1:641257/1‑150 (MQ=255)
            gTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCa                                                                                                                                         >  2:5399335/1‑150 (MQ=255)
               gcggcACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGc                                                                                                                                      <  2:329571/150‑1 (MQ=255)
               gcggcACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGc                                                                                                                                      <  2:5434826/150‑1 (MQ=255)
               gcggcACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGc                                                                                                                                      >  1:1741239/1‑150 (MQ=255)
                 ggcACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGccc                                                                                                                                    >  2:5006862/1‑150 (MQ=255)
                 ggcACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCATGCCCATGGGc                                                                                                                                          >  2:987303/1‑144 (MQ=255)
                    aCCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGc                                                                                                                                 >  1:2221685/1‑150 (MQ=255)
                     ccAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCATGCCCATGGGCTCGCCCGGCa                                                                                                                                <  2:3450157/150‑1 (MQ=255)
                      cAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCAc                                                                                                                               >  2:2430327/1‑150 (MQ=255)
                       aaaGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCatg                                                                                                                              <  1:1757037/150‑3 (MQ=255)
                        aaGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCGTGCCGGGCATGCCCATGGGCTCGCCCGGCatgg                                                                                                                             <  1:1967672/150‑4 (MQ=255)
                               tGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGcc                                                                                                                      >  1:2557020/1‑150 (MQ=255)
                                 agaAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCt                                                                                                                    >  2:4686993/1‑150 (MQ=255)
                                  taaaCCGGGCCCCTTGGCTGCGCTTCTGTTGTTGGCGACCAGGGTGGCCGGGCCTAGGTGGGTCACCCCGAGGACGTGGTTGGCATCTTTTTGGTCACCCATCTCCATGCCGGGGGAGCCCTTGGGCTTGCCGGGCACCGCCAGGCCCtt                                                                                                                   <  2:4253837/149‑1 (MQ=255)
                                  taaaCCGCGCCCCTCGGCTGAGCATCATTTGTGGGCGACCCCGGTGTCCTGGCCATCCTGGGTCACCCCTATGACCTGGTTGGCATCCTTGTGGACACCCATCTCCTTGCCGGGCGAGCCCTTGGGATTGCCGGGCACCGCCAGGCCCtt                                                                                                                   <  2:4180780/149‑1 (MQ=255)
                                  gaAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCtt                                                                                                                   >  2:2901926/1‑150 (MQ=255)
                                   aaaCAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTg                                                                                                                  >  2:4949677/1‑150 (MQ=255)
                                    aaCTGCGCCCCTTGGGTGAGATTCTTTTTTTGGCTACCTGGGTTTCATGGCCATCCTGGGTCACCCGTTTGAGCTGGTTGGAATCTTTGTGTTAACCATTGTCCTTGGGGGGCTCGCCATTGGGCATGCCGGGCACCGCCAGGCCCTTGa                                                                                                                 <  2:3244525/150‑1 (MQ=255)
                                    aaCTGCGCCCCTCGGCTGAGCATCATTTGTTGGCGACCAGGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCAGGCGGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGa                                                                                                                 <  2:4672224/150‑1 (MQ=255)
                                    aaCAGCGCCCCTCGGCTGAGCATCTGTTGTTGGCGACCTGGGTGTCGTGGCCAGCGTGGGTCACCCCTATGACCTGTTCGGCATCCTTGTGGTCACCCATCTCCTTGCGGGGCGAGCCCTTGGGCATGCCGGGCACCGCCAGGCCCTTGa                                                                                                                 <  2:3244324/150‑1 (MQ=255)
                                     accgcgcCCCTCGGCTGAGCATCAGTTGTTGGCGACCACGGTGTCCTGGCAATCCTGGGTCACCCCGTTGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCTTGGGAATGCCCGGCACCGCCAGGCCCTTGAg                                                                                                                <  2:2139769/147‑1 (MQ=255)
                                     aCAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAg                                                                                                                >  2:1792134/1‑150 (MQ=255)
                                      ccgcgcCCCTGGGCTGTGAATCTTTTGTGGCCGCCCCGGGTGTCGTGGCCATCCGGGGGCCCCCCGTTGACCTGGTTGGAATCTTTGTGGAAACCCATCTCATTGGGGGGGTCGCCATTGGCCTTGCCGGCCACCGCCAGGCCCTTGAgg                                                                                                               <  2:2275029/148‑1 (MQ=255)
                                             ccTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGc                                                                                                        >  2:1346178/1‑150 (MQ=255)
                                               tAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGt                                                                                                      >  1:4524227/1‑150 (MQ=255)
                                                  gCTGAGCATCTGTAGTGGGCCACCACGGTGTCCTGGCCAGCCTGGGCCCCCCCGATGACCGGTTCGGAATCCTTGGGGACACCCATCACCAGGCCGGGCGAGCCCTTGGGCAGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTg                                                                                                   <  1:4924437/150‑1 (MQ=255)
                                                  gCTGAGCATCAGTTGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCTTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTg                                                                                                   <  2:3553525/150‑1 (MQ=255)
                                                  gCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGACACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTg                                                                                                   <  2:3553911/150‑1 (MQ=255)
                                                    tgggCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGc                                                                                                 >  1:4208842/4‑150 (MQ=255)
                                                      aGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGGTTGGccc                                                                                               >  1:2280650/1‑149 (MQ=255)
                                                                gtTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCAc                                                                                     >  1:885244/1‑150 (MQ=255)
                                                                    gCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGc                                                                                 >  1:2279477/1‑150 (MQ=255)
                                                                         cACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTcggc                                                                            >  2:8395/1‑150 (MQ=255)
                                                                             gtgtCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGACATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTcggccggc                                                                        <  2:3478051/150‑1 (MQ=255)
                                                                              tgtCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCa                                                                       >  1:1920986/1‑150 (MQ=255)
                                                                                tCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACg                                                                     >  2:738759/1‑150 (MQ=255)
                                                                                tCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACg                                                                     >  1:2705251/1‑150 (MQ=255)
                                                                                 ccTGGCCATCCGGGGTCACCCCGCTGCCCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCGGGGCGCGCCCTTGGGATTGCCGGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGt                                                                    <  2:1135287/150‑1 (MQ=255)
                                                                                 ccTGGCCAGCCTGGTACACCCCGCTGACCTGGTAGGCATCCTGGTGGCCACCCATCCCCATGCCGGGCGCGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGt                                                                    <  1:842008/150‑1 (MQ=255)
                                                                                  cTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAACAGGCGCACCTGCTCGGCCGGCagatc                                                                   >  1:754454/1‑146 (MQ=255)
                                                                                   tGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                  >  1:979305/1‑150 (MQ=255)
                                                                                   tGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                  >  1:4133031/1‑150 (MQ=255)
                                                                                   tGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                  >  1:220148/1‑150 (MQ=255)
                                                                                     gCCTTCGTGGGTCACCCCGTTGACGTGGTTGGCATCCTTGTGGTCACCCATCTCCTGGCGGGGCGCGCCCTTGGGCTTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGcc                                                                <  2:2483519/150‑1 (MQ=255)
                                                                                     gCCAGCGTGGGTCACCCGGATGACGTGGTAGGCACCGTTGGGGCCACCCTTCCCCCGGCGGGGCGAGCCCCGGGGCAGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGcc                                                                <  1:2628351/150‑1 (MQ=255)
                                                                                       cATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCtt                                                              >  2:4166488/1‑150 (MQ=255)
                                                                                       cATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCtt                                                              >  2:630670/1‑150 (MQ=255)
                                                                                        aTCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTc                                                             >  1:1233812/1‑150 (MQ=255)
                                                                                         tCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTcg                                                            >  2:299775/1‑150 (MQ=255)
                                                                                         tCCTGGGTCACCCCGATGACCCGGTAGGCATCCGTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTcg                                                            >  2:4039162/1‑150 (MQ=255)
                                                                                          cgtGGGACCCCCCGTTGAGGTGGTTGCCTTCGTTGTGGACACCCTTCCCCTGGCGGGGCGCGCCCTGGGGCTGGCCCGCCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTcga                                                           <  1:5171141/148‑1 (MQ=255)
                                                                                          ccggggCCACCCCGATGACCTGGTCGGCATCCTTGTGGTCCCCCATCTCCATGCCGGGCGAGCCCTTGGGCATGCCGGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTcga                                                           <  2:1875957/147‑1 (MQ=255)
                                                                                               gTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAAc                                                      >  1:2123307/1‑150 (MQ=255)
                                                                                                    cccGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTgcc                                                 >  1:3547631/1‑150 (MQ=255)
                                                                                                    cccGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTgcc                                                 >  1:1676376/1‑150 (MQ=255)
                                                                                                      cGATGACGTGGTTGCCAACGTTGTGGCCCCCCATCCCCCGGCGGGGCGCGCCCCTGGGCTGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTgccgc                                               <  1:735956/150‑1 (MQ=255)
                                                                                                                gtcggtaTCCTTGTGGACACCAATCCCCCGGCGGGGCGAGCCCCGGGGCAGGCCCGCCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCAcccc                                     <  1:132735/144‑1 (MQ=255)
                                                                                                                 tAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCg                                    <  2:4847156/150‑1 (MQ=255)
                                                                                                                 tAGGCATCCTGGTGGTCACCCATCTCCTGGCCGGGCGCGCCCAGGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCg                                    <  2:2898261/150‑1 (MQ=255)
                                                                                                                   ggCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGgt                                  >  2:5404666/1‑150 (MQ=255)
                                                                                                                   ggCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGgt                                  >  2:2241046/1‑150 (MQ=255)
                                                                                                                    gCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                  >  1:4422544/1‑117 (MQ=255)
                                                                                                                    gCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                  <  2:4422544/117‑1 (MQ=255)
                                                                                                                    gCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                  <  2:1678555/117‑1 (MQ=255)
                                                                                                                     cagcgttGTGCCCACCAATCTCCATGCGGGGCCAGCCCTGGGCCAGGCCCGCCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGgtgt                                <  1:1523334/145‑1 (MQ=255)
                                                                                                                     cATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGgtgt                                <  2:885244/150‑1 (MQ=255)
                                                                                                                       tCCTTGTGGTCCCCCATCTCCTTGCGGGGCGAGCCCATGGGCAGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTgg                              <  2:641257/150‑1 (MQ=255)
                                                                                                                       tCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCAGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTgg                              <  2:1567077/150‑1 (MQ=255)
                                                                                                                          ttGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCac                           >  1:3501859/1‑150 (MQ=255)
                                                                                                                          ttGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCac                           >  1:3502287/1‑150 (MQ=255)
                                                                                                                              ggTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCacgacg                       >  1:996771/1‑150 (MQ=255)
                                                                                                                               gTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGc                      >  2:2447634/1‑150 (MQ=255)
                                                                                                                                  aCCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAg                   >  1:1688321/1‑150 (MQ=255)
                                                                                                                                  aCCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAg                   >  2:4792138/1‑150 (MQ=255)
                                                                                                                                    ccATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGc                 <  2:1996887/150‑1 (MQ=255)
                                                                                                                                    ccATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGc                 >  2:2191949/1‑150 (MQ=255)
                                                                                                                                    ccATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGc                 >  1:3581418/1‑150 (MQ=255)
                                                                                                                                      aTCTCCAGGCGGGGCGAGCCCAGGGGCTTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGt               <  2:4792474/150‑1 (MQ=255)
                                                                                                                                        ctcCATGCCGGGCGAGCCCATGGGCTTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTgg             <  2:3319480/150‑1 (MQ=255)
                                                                                                                                        ctcCATGCCGGGCGAGCCCAGGGGCATGCCCGGCACCGCCCGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTgg             <  2:3601444/150‑1 (MQ=255)
                                                                                                                                         tcCATGCCGGGCGAGCCCTTGGGCTGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGgc            <  2:1857717/150‑1 (MQ=255)
                                                                                                                                         cccaccccGGGCGAGCCCCAGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGgc            <  1:1724115/144‑1 (MQ=255)
                                                                                                                                          ccATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGgcg           >  2:4720383/1‑150 (MQ=255)
                                                                                                                                          ccATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGgcg           >  2:4720378/1‑150 (MQ=255)
                                                                                                                                              gCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCAc       >  2:380783/1‑150 (MQ=255)
                                                                                                                                               ccGGGCATGCCCATGGGCTCGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACg      >  1:4478495/1‑150 (MQ=255)
                                                                                                                                                cGGGCGCGCCCAGGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGc     <  2:837845/150‑1 (MQ=255)
                                                                                                                                                cGGGCATGCCCATGGGCTCGCCCGGCATCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGc     >  2:5111866/1‑150 (MQ=255)
                                                                                                                                                 gggCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGcc    >  1:2785001/1‑150 (MQ=255)
                                                                                                                                                   gCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCGGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGa  <  2:2261609/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
AGCGGTAGCAGGGTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGA  >  NC_002947/2510593‑2510889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑