Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,510,754 A→T 11.0% M109K (ATG→AAG)  PP_2203 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,510,7540AT11.0% 314.0 / 7.3 121M109K (ATG→AAG) PP_2203hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (63/42);  new base T (2/14);  total (65/56)
Fisher's exact test for biased strand distribution p-value = 7.11e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 124 total aligned reads displayed.

GTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTGCTTGACG  >  NC_002947/2510605‑2510903
                                                                                                                                                     |                                                                                                                                                     
   gcggcACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGc                                                                                                                                                    <  2:5434823/150‑1 (MQ=255)
   gcggcACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGc                                                                                                                                                    <  2:5434826/150‑1 (MQ=255)
   gcggcACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGc                                                                                                                                                    >  1:1741239/1‑150 (MQ=255)
   gcggcACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGc                                                                                                                                                    <  2:329571/150‑1 (MQ=255)
     ggcACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGccc                                                                                                                                                  <  2:4999055/150‑1 (MQ=255)
       cACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCgg                                                                                                                                                >  1:2320537/1‑150 (MQ=255)
         ccAAAGGCGCTGAGAAACCGCGCCCCTAGGCCGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCa                                                                                                                                              <  1:803939/150‑1 (MQ=255)
          cAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCAc                                                                                                                                             >  2:2430327/1‑150 (MQ=255)
           aaaGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCatg                                                                                                                                            <  1:1757037/150‑3 (MQ=255)
           aaaGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCAcc                                                                                                                                            <  2:3569930/150‑1 (MQ=255)
            aaGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCGTGCCGGGCATGCCCATGGGCTCGCCCGGCatgg                                                                                                                                           <  1:1967672/150‑4 (MQ=255)
                   tGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGcc                                                                                                                                    >  1:2557020/1‑150 (MQ=255)
                     agaAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCt                                                                                                                                  >  2:4686993/1‑150 (MQ=255)
                     agaAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCt                                                                                                                                  >  2:476116/1‑150 (MQ=255)
                      taaaCCGGGCCCCTTGGCTGCGCTTCTGTTGTTGGCGACCAGGGTGGCCGGGCCTAGGTGGGTCACCCCGAGGACGTGGTTGGCATCTTTTTGGTCACCCATCTCCATGCCGGGGGAGCCCTTGGGCTTGCCGGGCACCGCCAGGCCCtt                                                                                                                                 <  2:4253837/149‑1 (MQ=255)
                       aaaCAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTg                                                                                                                                >  2:4949677/1‑150 (MQ=255)
                        aaCTGCGCCCCTCGGCTGAGCATCATTTGTTGGCGACCAGGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCAGGCGGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGa                                                                                                                               <  2:4672224/150‑1 (MQ=255)
                        aaCAGCGCCCCTCGGCTGAGCATCTGTTGTTGGCGACCTGGGTGTCGTGGCCAGCGTGGGTCACCCCTATGACCTGTTCGGCATCCTTGTGGTCACCCATCTCCTTGCGGGGCGAGCCCTTGGGCATGCCGGGCACCGCCAGGCCCTTGa                                                                                                                               <  2:3244324/150‑1 (MQ=255)
                         accgcgcCCCTCGGCTGAGCATCAGTTGTTGGCGACCACGGTGTCCTGGCAATCCTGGGTCACCCCGTTGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCTTGGGAATGCCCGGCACCGCCAGGCCCTTGAg                                                                                                                              <  2:2139769/147‑1 (MQ=255)
                         aCAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAg                                                                                                                              >  2:1792134/1‑150 (MQ=255)
                          ccgcgcCCCTGGGCTGTGAATCTTTTGTGGCCGCCCCGGGTGTCGTGGCCATCCGGGGGCCCCCCGTTGACCTGGTTGGAATCTTTGTGGAAACCCATCTCATTGGGGGGGTCGCCATTGGCCTTGCCGGCCACCGCCAGGCCCTTGAgg                                                                                                                             <  2:2275029/148‑1 (MQ=255)
                           aGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGt                                                                                                                            >  1:4514352/1‑150 (MQ=255)
                                 ccTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGc                                                                                                                      >  2:1346178/1‑150 (MQ=255)
                                   tAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGt                                                                                                                    >  1:4524227/1‑150 (MQ=255)
                                      gCTGAGCATCTGTAGTGGGCCACCACGGTGTCCTGGCCAGCCTGGGCCCCCCCGATGACCGGTTCGGAATCCTTGGGGACACCCATCACCAGGCCGGGCGAGCCCTTGGGCAGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTg                                                                                                                 <  1:4924437/150‑1 (MQ=255)
                                      gCTGAGCATCAGTTGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCTTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTg                                                                                                                 <  2:3553525/150‑1 (MQ=255)
                                      gCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGACACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTg                                                                                                                 <  2:3553911/150‑1 (MQ=255)
                                        tGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATACCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGc                                                                                                               <  2:4068931/150‑1 (MQ=255)
                                          aGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGGTTGGccc                                                                                                             >  1:2280650/1‑149 (MQ=255)
                                                agtagtTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACACCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGgc                                                                                                       >  2:3327690/1‑150 (MQ=255)
                                                    gtTGGCGACCCCGGTGTCCTGCCCATCCTGGGTCACCCCGTTGACCTGGTAGGCATCCTTGGGGACACCCATCTCCATGCGGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCAc                                                                                                   <  1:1780257/150‑1 (MQ=255)
                                                    gtTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCAc                                                                                                   >  1:885244/1‑150 (MQ=255)
                                                        gCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGc                                                                                               >  1:2279477/1‑150 (MQ=255)
                                                             cACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTcggc                                                                                          >  2:8395/1‑150 (MQ=255)
                                                                ggTTTCCGGGCCATCGTGGGTCACCCCTATTACGTGTTAGGAATCCTTGTGGTCACCAATCCCCTTGCGGGGCGACCCCTTGGGCATCCCGGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTcgccaaa                                                                                       <  1:3043511/150‑6 (MQ=255)
                                                                gatctCCGGGCCAGCCTGGGTCCCCCCGTTGACGTGGTCGGCATCCTTGTGGTCACCCATCTCCCGGCGGGGCGCGCCCTGGGGCTGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAACAGGCGCACCTGCTcggccgg                                                                                       <  2:754454/146‑1 (MQ=255)
                                                                 gtgtCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGACATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTcggccggc                                                                                      <  2:3478051/150‑1 (MQ=255)
                                                                    tCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACg                                                                                   >  1:2705251/1‑150 (MQ=255)
                                                                    tCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACg                                                                                   >  2:738759/1‑150 (MQ=255)
                                                                      cTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAACAGGCGCACCTGCTCGGCCGGCagatc                                                                                 >  1:754454/1‑146 (MQ=255)
                                                                       tGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                                >  1:220144/1‑150 (MQ=255)
                                                                       tGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                                >  1:979305/1‑150 (MQ=255)
                                                                       tGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                                >  1:4133031/1‑150 (MQ=255)
                                                                       tGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                                >  1:220148/1‑150 (MQ=255)
                                                                         gCCTTCGTGGGTCACCCCGTTGACGTGGTTGGCATCCTTGTGGTCACCCATCTCCTGGCGGGGCGCGCCCTTGGGCTTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGcc                                                                              <  2:2483519/150‑1 (MQ=255)
                                                                           cATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCtt                                                                            >  2:4166488/1‑150 (MQ=255)
                                                                           cATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCtt                                                                            >  2:630670/1‑150 (MQ=255)
                                                                            aTCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTc                                                                           >  1:1233812/1‑150 (MQ=255)
                                                                             tCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTcg                                                                          >  2:299775/1‑150 (MQ=255)
                                                                             tCCTGGGTCACCCCGATGACCCGGTAGGCATCCGTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTcg                                                                          >  2:4039162/1‑150 (MQ=255)
                                                                              cgtGGGACCCCCCGTTGAGGTGGTTGCCTTCGTTGTGGACACCCTTCCCCTGGCGGGGCGCGCCCTGGGGCTGGCCCGCCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTcga                                                                         <  1:5171141/148‑1 (MQ=255)
                                                                              ccggggCCACCCCGATGACCTGGTCGGCATCCTTGTGGTCCCCCATCTCCATGCCGGGCGAGCCCTTGGGCATGCCGGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTcga                                                                         <  2:1875957/147‑1 (MQ=255)
                                                                                   gTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAAc                                                                    >  1:2123307/1‑150 (MQ=255)
                                                                                        cccGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTgcc                                                               >  1:3547631/1‑150 (MQ=255)
                                                                                        cccGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTgcc                                                               >  1:1676376/1‑150 (MQ=255)
                                                                                        cccGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCAGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTgcc                                                               >  2:1314661/1‑150 (MQ=255)
                                                                                          cGATGACGTGGTTGCCAACGTTGTGGCCCCCCATCCCCCGGCGGGGCGCGCCCCTGGGCTGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTgccgc                                                             <  1:735956/150‑1 (MQ=255)
                                                                                                    gtcggtaTCCTTGTGGACACCAATCCCCCGGCGGGGCGAGCCCCGGGGCAGGCCCGCCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCAcccc                                                   <  1:132735/144‑1 (MQ=255)
                                                                                                     tAGGCATCCTGGTGGTCACCCATCTCCTGGCCGGGCGCGCCCAGGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCg                                                  <  2:2898261/150‑1 (MQ=255)
                                                                                                       ggCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGgt                                                >  2:5404666/1‑150 (MQ=255)
                                                                                                       ggCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGgt                                                >  2:2241046/1‑150 (MQ=255)
                                                                                                        gCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                                >  1:1678555/1‑117 (MQ=255)
                                                                                                        gCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                                >  1:4422544/1‑117 (MQ=255)
                                                                                                        gCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                                <  2:4422544/117‑1 (MQ=255)
                                                                                                        gCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                                <  2:1678555/117‑1 (MQ=255)
                                                                                                         cagcgttGTGCCCACCAATCTCCATGCGGGGCCAGCCCTGGGCCAGGCCCGCCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGgtgt                                              <  1:1523334/145‑1 (MQ=255)
                                                                                                         cATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCAGGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGgtgt                                              <  2:3139412/150‑1 (MQ=255)
                                                                                                           tCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCAGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTgg                                            <  2:1567077/150‑1 (MQ=255)
                                                                                                              ttGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCac                                         >  1:3501859/1‑150 (MQ=255)
                                                                                                                  ggTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCacgacg                                     >  1:996771/1‑150 (MQ=255)
                                                                                                                   gTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGc                                    >  2:2447634/1‑150 (MQ=255)
                                                                                                                      aCCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAg                                 >  2:4792138/1‑150 (MQ=255)
                                                                                                                        ccATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGc                               >  1:3581418/1‑150 (MQ=255)
                                                                                                                        ccATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGc                               <  2:1996887/150‑1 (MQ=255)
                                                                                                                        ccATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGc                               >  2:2191949/1‑150 (MQ=255)
                                                                                                                          aTCTCCAGGCGGGGCGAGCCCAGGGGCTTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGt                             <  2:4792474/150‑1 (MQ=255)
                                                                                                                            ctcCATGCCGGGCGAGCCCATGGGCTTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTgg                           <  2:3319480/150‑1 (MQ=255)
                                                                                                                             tcCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGgc                          <  2:4524227/150‑1 (MQ=255)
                                                                                                                             cccaccccGGGCGAGCCCCAGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGgc                          <  1:1724115/144‑1 (MQ=255)
                                                                                                                              ccATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGgcg                         >  2:4720383/1‑150 (MQ=255)
                                                                                                                                  gCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCAc                     >  2:380783/1‑150 (MQ=255)
                                                                                                                                   ccGGGCATGCCCATGGGCTCGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACg                    >  1:4478495/1‑150 (MQ=255)
                                                                                                                                    cGGGCGCGCCCAGGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGc                   <  2:837845/150‑1 (MQ=255)
                                                                                                                                    cGGGCATGCCCATGGGCTCGCCCGGCATCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGc                   >  2:5111866/1‑150 (MQ=255)
                                                                                                                                     gggCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGcc                  >  1:2785001/1‑150 (MQ=255)
                                                                                                                                       gCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCGGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGa                <  2:2261609/150‑1 (MQ=255)
                                                                                                                                          cgCCCATGGGCATGCCCGCCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCCCGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGGGGCACGACGCAAGGCGTGGCGCCACGCCGAGGc             <  2:5155731/149‑1 (MQ=255)
                                                                                                                                          aGCCCAGGGGCATGCCGGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGc             <  2:5155691/150‑1 (MQ=255)
                                                                                                                                           gCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCg            >  1:3539337/1‑150 (MQ=255)
                                                                                                                                            cccATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGt           >  2:1344837/1‑150 (MQ=255)
                                                                                                                                              cATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTTTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTg         >  2:3079158/1‑150 (MQ=255)
                                                                                                                                              cATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCACGGCGTGGCGCCACGCCGCGGCGTTg         >  2:3268186/1‑150 (MQ=255)
                                                                                                                                              cATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTg         >  2:5057717/1‑150 (MQ=255)
                                                                                                                                              cATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTg         >  2:1542170/1‑150 (MQ=255)
                                                                                                                                              cATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTg         >  2:111667/1‑150 (MQ=255)
                                                                                                                                               aTGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTGc        <  2:4932746/150‑1 (MQ=255)
                                                                                                                                               aTGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTGc        <  2:2172734/150‑1 (MQ=255)
                                                                                                                                                tGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTGCt       <  2:4982695/150‑1 (MQ=255)
                                                                                                                                                     aTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTGCTTGACg  <  2:1741239/150‑1 (MQ=255)
                                                                                                                                                     aTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACACCGAGGCGTTGCTTGACg  >  2:1886735/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTGCTTGACG  >  NC_002947/2510605‑2510903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑