| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,652,126 | A→T | 6.6% | intergenic (+100/+34) | PP_2320 → / ← oprI | hypothetical protein/major outer membrane lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,652,126 | 0 | A | T | 6.6% | 381.5 / 12.1 | 132 | intergenic (+100/+34) | PP_2320/oprI | hypothetical protein/major outer membrane lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (65/55); new base T (6/3); total (71/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
Only 100 of 135 total aligned reads displayed.
CCAGGGGGCCGCACCGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACGGTAGGCTTCG > NC_002947/2651978‑2652274 | ccAGGGGGCCGCACCGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAg > 2:2438931/1‑150 (MQ=255) cAGGGGGCCGCACTGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGt < 1:1890216/150‑1 (MQ=255) aGGGGGCCGCACCGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTg > 2:1753211/1‑150 (MQ=255) gggCCGCACCGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGt < 1:2340806/150‑1 (MQ=255) ggCCGCACCGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTc < 1:3873068/150‑1 (MQ=255) ggCCGCACCGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTCTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTc < 1:2163920/150‑1 (MQ=255) gCCGCACCGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCg < 2:748168/150‑1 (MQ=255) cGCACCGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACTTGTGGGTCGGc < 1:1878102/150‑1 (MQ=255) cGCACCGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGc < 2:351192/150‑1 (MQ=255) cGCACCGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGc < 1:2931258/150‑1 (MQ=255) cGCACCGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGc < 1:1439919/150‑1 (MQ=255) cGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGcttctt > 1:4183848/1‑150 (MQ=255) cGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGcttctt > 1:1758609/1‑150 (MQ=255) gAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCgg > 2:4316882/1‑149 (MQ=255) gAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGt > 2:3096998/1‑150 (MQ=255) gAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGt < 1:4791247/150‑1 (MQ=255) gAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGt > 1:740324/1‑150 (MQ=255) aGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTg < 2:218053/150‑1 (MQ=255) gaaTTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGTCCTGCCCTAAGTGCAGCCCTTTAAGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAATAGCCCACCCACAAGTGGGTCGGCTTCTTATCCATCCGGGa > 2:5275353/3‑150 (MQ=255) ttCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGa < 1:2395080/150‑1 (MQ=255) tCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGat > 2:3644670/1‑150 (MQ=255) tgCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGatta < 1:2205273/149‑1 (MQ=255) gAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACt > 2:1940242/1‑150 (MQ=255) aCTGCAGTAAGGTAATTTCGGCGTACCCAGGCCGGCCCTTAGAGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTg < 2:2403858/150‑1 (MQ=255) tGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCg > 1:5235766/1‑150 (MQ=255) cAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCggc > 2:4633859/1‑150 (MQ=255) gTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCggctg > 1:4459029/1‑150 (MQ=255) tAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCggctgg < 1:3588551/150‑1 (MQ=255) gTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCttt < 1:4633859/150‑1 (MQ=255) tAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTg < 2:1263805/150‑1 (MQ=255) tttCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTcc < 1:1966019/150‑1 (MQ=255) tttCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTcc > 1:860493/1‑150 (MQ=255) ttCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCa < 1:365780/150‑1 (MQ=255) ttCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCa < 2:4654575/150‑1 (MQ=255) gaaaaGGCCTGCACTAAGGGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGc > 2:2692688/5‑150 (MQ=255) aCCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGc < 1:326206/150‑1 (MQ=255) ccAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAg < 2:1796792/150‑1 (MQ=255) aaaGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAg > 1:1843958/3‑150 (MQ=255) aGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAggg > 2:3179092/1‑150 (MQ=255) cTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGgcgcg < 1:3795721/150‑1 (MQ=255) cccTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTc < 1:2513784/150‑1 (MQ=255) ccTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCa < 2:2278542/130‑1 (MQ=255) tAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTg < 1:3938382/150‑1 (MQ=255) tAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTg < 2:3183149/150‑1 (MQ=255) cAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTc < 1:1368163/150‑1 (MQ=255) cAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTGGGCTTc < 1:3799241/150‑1 (MQ=255) cAGGCCTTTTCGTACCTGCTGACCGCGTTCGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACACGTGGGTCGGCTTCTTAACAATCAGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCTTACGCAGGGCGCGCTCGTTGGCTTc < 1:1368120/150‑1 (MQ=255) aGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACTTGTGGGTCGGcttttttatt < 1:587883/84‑5 (MQ=37) aGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCg > 2:3263431/1‑150 (MQ=255) aGGCCTTTTCGTACCACCAGACCGCGATAGCCGGTTTCAAAGGCAATAAAAAAGCCGACCAACAAGTCGGTCGGCTTCTTAACAAACCGTGAGGATTATTACTTGCGGCTGGCTTTCACCAGCATAAGCAGGGCGCGCTCGTTGGCCTCg > 2:4681845/1‑150 (MQ=255) ggCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGt < 2:5235766/150‑1 (MQ=255) gCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACACGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTc < 2:258497/150‑1 (MQ=255) gCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTc > 2:575271/1‑150 (MQ=255) cTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAg > 1:5272309/1‑150 (MQ=255) ttttCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGc > 1:5059640/1‑150 (MQ=255) ttttCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGc < 1:5241854/150‑1 (MQ=255) ttttCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGc > 2:5241854/1‑150 (MQ=255) tgctgACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGa < 1:1753211/150‑1 (MQ=255) tgctgACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGa < 1:2708350/150‑1 (MQ=255) tgctgACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGa > 1:236541/1‑150 (MQ=255) gctgACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGAGTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAg > 1:862306/1‑150 (MQ=255) cgcgTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCt < 1:4569112/150‑1 (MQ=255) cgcgTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCt > 1:1563174/1‑150 (MQ=255) tttGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGc > 1:5256403/1‑150 (MQ=255) cGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTg > 1:3153812/1‑150 (MQ=255) ggTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGc > 1:3583421/1‑150 (MQ=255) gTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGcc > 2:1971599/1‑150 (MQ=255) gTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGcc > 2:1971600/1‑150 (MQ=255) tCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCAtt > 2:5349672/1‑150 (MQ=255) aaaGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGc < 1:4639616/150‑1 (MQ=255) aaaGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATCGc > 1:2558469/1‑150 (MQ=255) aGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGcgt > 1:4857167/1‑150 (MQ=255) ggCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGcgtc < 1:1625447/150‑1 (MQ=255) ggCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGcgtc < 2:740324/150‑1 (MQ=255) ggCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCACGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGcgtc < 2:3651375/150‑1 (MQ=255) gCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCgg < 1:4812241/136‑1 (MQ=255) cAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGcgtcgt < 1:4227772/150‑1 (MQ=255) cAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGcgtcgt > 1:4323277/1‑150 (MQ=255) tAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAg > 2:241286/1‑150 (MQ=255) aaaaaaGCCGACCCACCAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGc < 2:17060/150‑1 (MQ=255) agaaGCCGACCCACTTGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCt > 1:2407332/3‑150 (MQ=255) agaaGCCGACCCACTTGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCGTCTGAGCGGCTGCCATTGCGTCGTCAGCCt > 1:2407325/3‑150 (MQ=255) aaatGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCt > 1:3923915/1‑150 (MQ=255) aGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTAc < 2:1049034/150‑1 (MQ=255) gCCGACCCACTTGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACg > 1:3029833/1‑150 (MQ=255) gCCGACCCACTTGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACg > 2:4851245/1‑150 (MQ=255) gCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACg < 2:4183848/150‑1 (MQ=255) ccGACCCACTTGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACgg > 1:3755977/1‑150 (MQ=255) cGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACGGt > 2:3711405/1‑150 (MQ=255) gACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACGGTa < 1:2120198/150‑1 (MQ=255) aCCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACGGTAg > 2:3116966/1‑150 (MQ=255) aCCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACGGTAg > 2:387509/1‑150 (MQ=255) ccACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACGGTAGGc > 1:3199121/1‑150 (MQ=255) ccACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACGGTAGGc > 2:3356474/1‑150 (MQ=255) ccACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACGGTAGGc > 1:3316725/1‑150 (MQ=255) cacaAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACGGTAGGCt > 1:4279316/1‑150 (MQ=255) acaAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACGGTAGGCtt > 1:956780/1‑150 (MQ=255) acaAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACGGTAGGCtt > 1:55413/1‑150 (MQ=255) aaGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGcgtc < 2:1541306/128‑1 (MQ=255) aaGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGcgtc > 1:1541306/1‑128 (MQ=255) | CCAGGGGGCCGCACCGATGGTGACGAGCATTCCGCCCGAACTGCAGTAAGGTAATTTCGGCGTACCCAGGCCTGCCCTTAGTGCAGGCCTTTTCGTACCTGCTGACCGCGTTTGCCGGTTTCAAAGGCAATAAAAAAGCCGACCCACAAGTGGGTCGGCTTCTTAACAATCCGTGAGGATTATTACTTGCGGCTGGCTTTGTCCAGCATACGCAGGGCGCGCTCGTTGGCTTCGTCAGCGGTCTGCTGAGCCTTCTGAGCGGCTGCCATTGCGTCGTCAGCCTTACGGTAGGCTTCG > NC_002947/2651978‑2652274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |