| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,668,721 | A→C | 7.0% | intergenic (+30/‑36) | acnA‑II → / → prpF | aconitate hydratase/aconitate isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,668,721 | 0 | A | C | 7.0% | 372.7 / 6.6 | 129 | intergenic (+30/‑36) | acnA‑II/prpF | aconitate hydratase/aconitate isomerase |
| Reads supporting (aligned to +/- strand): ref base A (51/67); new base C (9/2); total (60/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.35e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 129 total aligned reads displayed.
GCGAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAAATTCCAGGTCC > NC_002947/2668573‑2668869 | gCGAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAg < 2:288228/150‑1 (MQ=255) cGAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGACGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAgg < 1:1084251/150‑1 (MQ=255) gAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAggg > 2:4719056/1‑150 (MQ=255) tgTGCCTTGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGTGTGCTGCAGCGCTTTGCCCAGGACTTCCTCTAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGt < 1:2473571/149‑1 (MQ=255) tGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCCGGGGAt > 1:3371608/1‑150 (MQ=255) gCCTGTAAGTACCGGTGACCTCCCGTCTGGACACCGCCGAGGAAGTGTCGATCAACGAAGCGGGCGGGGTGCTGCAGCGATTTGCCCAGCACTTCCTCTAAGCGACCGCATGAGCATCAATCGGGGGCCGAAAAGCGGCCCCAgactcat < 2:1922545/150‑7 (MQ=255) cTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTc > 2:3688549/1‑150 (MQ=255) tGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCa > 2:161744/1‑150 (MQ=255) tGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCa > 2:161742/1‑150 (MQ=255) gAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCAcc > 2:416416/1‑150 (MQ=255) gTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGa < 2:2579166/150‑1 (MQ=255) cGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCTATCTACGAAGCGGGCGGGTTGCTGCAGCTCTTTCCCCAGGACTTCCTCCAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTAt < 1:1599996/150‑1 (MQ=255) cGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCCGCCCCAGGGTATTTCAACGGACAAt > 2:2433293/1‑150 (MQ=255) gTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCa < 1:161742/150‑1 (MQ=255) gTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCa < 2:2252368/150‑1 (MQ=255) gTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCa < 1:161744/150‑1 (MQ=255) gACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCCCAAAGCGGCCCCAGGGTATTTAACCGGACAATCAgg > 1:4309109/1‑150 (MQ=255) cTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCCAAGCGGCCCCCCGGGATTTCACCCGCCTATCAGGATg > 1:2241349/1‑150 (MQ=255) cTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATg > 2:207156/1‑150 (MQ=255) tGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGc < 2:735446/150‑1 (MQ=255) gCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGcc < 2:4786466/150‑1 (MQ=255) gCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGcc < 1:3534958/150‑1 (MQ=255) gCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGcc < 1:3534959/150‑1 (MQ=255) ggACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCCAAGCGGCCCCAGGGTATTTAAACGGACAATAAGGATGCCCAACaaa > 1:460975/1‑150 (MQ=255) gACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGaaaa < 1:4347378/150‑1 (MQ=255) acacCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAAt < 1:1467268/150‑1 (MQ=255) acacCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAAt < 2:5364758/150‑1 (MQ=255) acacCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAAt < 1:282909/150‑1 (MQ=255) acCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGt < 2:2426486/150‑1 (MQ=255) ccgccgAGGAAGTGTCGATCTACGAACCGGCCGCGGTGCTGCAGCGCACTCCCCACCACTTCCTCGAACCCACCGCCTGAGCATGAAACCGGGGCCGCAAAGCCCCCCCAGGGTATTTCACCGCACTATCACGATGCCCAAGAAAATgac < 2:4605725/150‑3 (MQ=255) cgccgAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTca < 2:4530857/150‑1 (MQ=255) cgccgAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTca < 2:4318316/150‑1 (MQ=255) ccgAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTcaca < 1:5127070/150‑1 (MQ=255) aaGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCCCAAAGCGGCCCCACGGTATTTCACCGGACTAACAGGATGCCCAAGAAAAAGTCAAATGTAcc > 1:1282070/1‑150 (MQ=255) gtgtCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTAcccc < 2:5302274/150‑1 (MQ=255) tgtCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGGCGCCAAGCGGCCCCCGGGGATTTGAACCGCCTATCAGGATGCCCAAGACAATGTCACCTGTGccccc > 1:215418/1‑149 (MQ=255) gtCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCACGGTAATTAACCCGACAATCAGGATGCCCAAGAAAAAGTAACAAGTACCCCAg > 2:492761/1‑150 (MQ=255) gATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATc > 2:815841/1‑150 (MQ=255) cTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCaaa < 2:2116031/150‑1 (MQ=255) cGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATc < 2:3424377/150‑1 (MQ=255) gAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGTCTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATAAAAAtac > 1:4054113/1‑148 (MQ=255) aGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATcccc < 1:4116690/150‑1 (MQ=255) cgggcgggGTGCTGCAGCGCTTTGCCCTGGACTTCCTCGAAGCGACCGCCTGAGCTTGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGc < 1:464414/150‑1 (MQ=255) ggcgggGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCACGGTATTTCACCGGACTATCAGGATGCCCAAGAAAAAGTCACAAGAAACCCAGAACAAAAAACCCGccc > 2:4211728/1‑149 (MQ=255) gcgggGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTc > 2:4587965/1‑120 (MQ=255) gTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACa < 1:87747/150‑1 (MQ=255) gctgcAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCCAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATc > 2:2813048/1‑150 (MQ=255) ctgcAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCAACCGACTATCAGGATGCCCAAGAAAATTTCACATGTACCCCAGATCAAAATCCCCCCCACCTACATcc > 2:147933/1‑150 (MQ=255) gcAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCCAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCAACCTCcgc > 2:4440516/1‑150 (MQ=255) cAGCGCTTTGCCCTGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGGCGGAAAGCGGGCCCAGGGTATTTGAGCGGTCTATGAGGATTCGCAAGTAAATGTGACATTTTAGCCAGTTCAAAATAGCCGCCACCTACATAcgcg > 2:3874347/1‑150 (MQ=255) cAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCcgcg < 2:2164757/150‑1 (MQ=255) gcTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGcggcgg < 1:4429028/150‑1 (MQ=255) gcTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGcggcgg < 1:3289049/150‑1 (MQ=255) ttGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCAc < 2:1329536/150‑1 (MQ=255) cccAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGc > 1:4996029/1‑126 (MQ=255) cccAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGc < 2:4996029/126‑1 (MQ=255) ccAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCCGGGTATTTCACCGGACTATCCCGCTGCCCAAGAAAAGGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGc > 2:1126774/1‑150 (MQ=255) cAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCa > 2:3079477/1‑150 (MQ=255) ccTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCgtg < 2:768816/150‑1 (MQ=255) ccGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCt < 1:2385584/150‑1 (MQ=255) cTGAGCATGAATCGGGGGCCGCCAAGCGGCCCCAGGGTATTTCACCCGACTATCAGGATGCCCAAGAAAAAGTCACAAGTACCCCCGATCAAAATACCCCCCCCCAACAACCCCGGCGGCACCACCAAAGGCGTGTTATTACGCCAGCaa > 1:2706128/1‑150 (MQ=255) aGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGAc < 2:141847/150‑1 (MQ=255) aGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGAc < 1:815841/150‑1 (MQ=255) tGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGc < 1:4719056/150‑1 (MQ=255) gAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGcc < 1:4156132/150‑1 (MQ=255) ccctggggCCGCTTTGCGGCCCCCGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTA‑CCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAATGCGTGTTCTTCCGCCTGCAAGACCTGc > 1:4824143/5‑146 (MQ=255) ccctggggCCGCTTTGCGGCCCCCGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTA‑CCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAATGCGTGTTCTTCCGCCTGCAAGACCTGc < 2:4824143/142‑1 (MQ=255) cctggggCCGCTTTGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTca < 1:842727/61‑1 (MQ=37) cctggggCCGCTTTGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTca > 2:842727/4‑64 (MQ=37) cctggggCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGa > 2:1141231/4‑150 (MQ=255) ggggCCGCTTTGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCa > 1:3583317/1‑150 (MQ=255) ggggCCGCAAAGCGGCCCCCGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGAGCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCa > 2:393917/1‑150 (MQ=255) gggCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAg < 1:2921410/150‑1 (MQ=255) gggCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAg > 2:5249013/1‑150 (MQ=255) gggCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACAGGTCCCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCACAGGCGTGTTCTTCCGCCTGCACGACCTGCCCGAGCAg > 2:1196700/1‑150 (MQ=255) ggCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAgg > 2:2680754/1‑150 (MQ=255) ggCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAgg < 2:4942525/150‑1 (MQ=255) ggCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAgg < 2:4251662/150‑1 (MQ=255) ggCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAgg < 1:4580827/150‑1 (MQ=255) ggCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAgg < 2:4942494/150‑1 (MQ=255) cGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTcc > 1:3760403/1‑123 (MQ=255) cGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGgcgc > 1:1178340/1‑150 (MQ=255) cGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGgcgc > 1:3281731/1‑150 (MQ=255) gCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCa > 1:3760966/1‑150 (MQ=255) gCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCa > 1:1697892/1‑150 (MQ=255) tttgCGGCCCCCGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCaaa < 1:5130990/147‑1 (MQ=255) aaaGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCaaa > 1:2307351/1‑150 (MQ=255) aaaGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCaaa > 1:4545286/1‑150 (MQ=255) gCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAAATTc < 1:5249013/150‑1 (MQ=255) cGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAAATTcc < 2:3259786/150‑1 (MQ=255) cGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAAATTcc < 1:3688549/150‑1 (MQ=255) gggcccAGGGTATTTCTCCGGACTATCAGGATGCCCAAGAAAATGTCACATGTTCCCCAGATCAATATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAATTTCCa < 1:4348005/147‑1 (MQ=255) ggCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAAATTCCa < 2:1346086/150‑1 (MQ=255) ggCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAAATTCCa < 1:1883513/150‑1 (MQ=255) ccccAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAAATTCCAgg > 2:5441137/1‑150 (MQ=255) cccAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAGTGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAAATTCCAGGt > 1:3533971/1‑150 (MQ=255) cccAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAAATTCCAGGt > 2:559619/1‑150 (MQ=255) ccAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGc < 2:4185745/117‑1 (MQ=255) ccAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGc > 1:4185745/1‑117 (MQ=255) cAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAAATTCCAGGTcc < 1:2433293/150‑1 (MQ=255) | GCGAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAAATTCCAGGTCC > NC_002947/2668573‑2668869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |