| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,792,283 | A→T | 8.7% | intergenic (‑71/+18) | PP_2442 ← / ← sstT | DUF480 domain‑containing protein/serine/threonine transporter SstT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,792,283 | 0 | A | T | 8.7% | 353.1 / 16.5 | 114 | intergenic (‑71/+18) | PP_2442/sstT | DUF480 domain‑containing protein/serine/threonine transporter SstT |
| Reads supporting (aligned to +/- strand): ref base A (74/30); new base T (6/4); total (80/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 115 total aligned reads displayed.
GCTTTTCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATGG > NC_002947/2792134‑2792431 | gCTTTTCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCGGCa > 2:1230727/1‑150 (MQ=255) ttCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGc < 1:835781/150‑1 (MQ=255) tCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGcg < 1:3759811/150‑1 (MQ=255) cGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGcgg > 2:2125781/1‑150 (MQ=255) cGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGcgg < 1:683016/150‑1 (MQ=255) cGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGcgg < 1:682825/150‑1 (MQ=255) cGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGcgg < 1:682772/150‑1 (MQ=255) gATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGcggc > 1:1308099/1‑150 (MQ=255) gATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGcggc > 1:1308340/1‑150 (MQ=255) gATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGACCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGcggc > 1:4289918/1‑150 (MQ=255) tCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCTTTGcggccc < 1:396859/150‑1 (MQ=255) tCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGcggccc < 2:1930126/150‑1 (MQ=255) tCAGCGAGCCGAGAACGCGGATCTCGAGGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGAAATTGGGGCCGCAAAGcggccc < 1:5014830/150‑1 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGcggccccgg > 1:1461345/1‑150 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGcggccccgg > 1:3804993/1‑150 (MQ=255) cGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCTTTGcggccccaat < 2:3064076/150‑4 (MQ=255) gAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCTTTGcggccccaatt < 2:1409092/150‑5 (MQ=255) gAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGcggccccggcc > 1:3085630/1‑150 (MQ=255) gagaACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCtt > 1:1062648/1‑150 (MQ=255) gagaACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCtt > 1:2748036/1‑150 (MQ=255) ggATCTCGATGCTGTTGAAGCGGCCTTCACCAGCGGATTCGTGTACTGACAAGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGACGCAAAGCGGCCCCGGCCCTCTTAGCCGAgg > 1:3932187/1‑150 (MQ=255) tcGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCgctg > 2:605543/1‑150 (MQ=255) gATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCgctgct > 1:3540065/1‑150 (MQ=255) gATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCgctgct > 2:4760181/1‑150 (MQ=255) tGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAGGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGa > 2:508707/1‑150 (MQ=255) tGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGa > 2:1684378/1‑150 (MQ=255) gTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAg > 1:5136551/1‑150 (MQ=255) aaGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTg > 1:654604/1‑150 (MQ=255) cgcgcCCTACACCGGGGTTTTCGTGTTCTGACAGGGCCCTGTCTGGGGGGGGGGTAAAGGCCACTCGGGTTGGTAATGCC‑ATCGGTTACGCCATTTGGGGCCGAAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGa < 2:4862210/149‑1 (MQ=255) gCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGAc > 2:2836816/1‑150 (MQ=255) gCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGAc > 1:1853856/1‑150 (MQ=255) cTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGcc > 1:1850901/1‑150 (MQ=255) cTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGcc > 1:221914/1‑150 (MQ=255) ccccgggggTTTGGTGTTCGGCCTTGGCCCTGGCGGGGGGGGGGGTAAGGGCCCCTCGGGTTGTTAAGGCC‑CCCGCTTAGGCCATTGGGGGCCGCAAGGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCcgcg < 2:1669620/143‑1 (MQ=255) cccggctgTTTTGTGTTTTTACTGGGCCCTGTCGGGTGGCTGGGTAATGCCCATTTGGGTTGTTAATGCA‑TTGGTTTACGGAATTTGGGGCCCAAACGGGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCgg < 2:5190980/143‑1 (MQ=255) ccGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCa > 2:2039375/1‑150 (MQ=255) ccGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCa > 1:1166501/1‑150 (MQ=255) ccGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCa > 1:1682472/1‑150 (MQ=255) ccGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCa > 2:4182474/1‑150 (MQ=255) ttggttttCTTACTTGGCCGTGTCTGGTGGGGGGGTAAAGGCCACTAGGGTTGGTATTGCC‑TGCGGTTATGGAAATGGGGGCCGCAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACa < 2:347790/144‑1 (MQ=255) ttggttttCTTACTTGCCCCTGTCTGGGGGGTGGGTAATGGCCACTTGGTTTGGTAAGGCC‑AGCGCTTATGGCATTTGGGGCCGAAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACa < 2:347511/144‑1 (MQ=255) tCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAg > 2:4133488/1‑150 (MQ=255) tCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAg > 2:2124364/1‑150 (MQ=255) tgtTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGcac > 2:4093012/1‑150 (MQ=255) tgtTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGcac > 1:1499854/1‑150 (MQ=255) tCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATc > 1:4733903/1‑150 (MQ=255) tGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCgg > 1:4186814/1‑150 (MQ=255) gACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGt > 1:4191637/1‑150 (MQ=255) gACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGt > 1:4191556/1‑150 (MQ=255) ggCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCgaag > 1:4403906/1‑150 (MQ=255) ggCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCgaag > 1:4236625/1‑150 (MQ=255) ccgtGTCTGGTGGCTGGGGAAAGGCCACTTGGTTAGTTAATGCC‑ATGGCGTAAGGCATTTGGGGCCGCACAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCATATCGGTCgaagaa < 2:3151538/147‑1 (MQ=255) ccTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAAt > 1:4767666/1‑150 (MQ=255) cTGTCTGGTGGGGGGGCAATGCCCAATGGTGTTGTTATTGCC‑ACGGCGTAGGGATTTGGGGGCCGCAAGGCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAAtt < 2:4584239/150‑1 (MQ=255) tGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTc > 2:2014115/1‑150 (MQ=255) tGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTc > 2:2014133/1‑150 (MQ=255) tctcGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCA‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAg > 2:4667917/1‑150 (MQ=255) tcGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAgcg > 2:3100314/1‑150 (MQ=255) tcGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAgcg > 1:4276245/1‑150 (MQ=255) gCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGGCGGTCCTGCCGCGGCAGTGACCCGCACCGCGGTCGAGGACTTCAGCGCCGtt > 2:5062596/1‑150 (MQ=255) ggAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGc > 1:1642256/1‑150 (MQ=255) gAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGcc > 1:1020806/1‑150 (MQ=255) aaaGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCg > 1:3123751/1‑150 (MQ=255) acggCCACTTGGTTTGGTACTGCA‑AGCGCGTACGGAATTGGGGGCCCCAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGa < 2:227201/148‑1 (MQ=255) aGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAg > 2:4468540/1‑150 (MQ=255) ctcgggTTGTTATTGCC‑ATGGCTTACGGCATTTGGGGCCGCAACGCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGc < 2:2586044/147‑1 (MQ=255) tcgggTAGGTATTGCC‑ATCGCGTATGGCATTTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCa < 2:5361658/148‑1 (MQ=255) ggtaATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGcc > 1:3833541/1‑150 (MQ=255) ccaattGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGcc > 2:4352101/6‑150 (MQ=255) ccaattGCC‑ATCGCGTAAGGCAAGTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGcc > 2:4439041/6‑150 (MQ=255) gtaATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCg > 2:1217613/1‑150 (MQ=255) ggtaTGCCAATCGCGTACGGAAATGGGGGCCGCACCGCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGcc < 1:5420787/147‑1 (MQ=255) taATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCga > 2:1372746/1‑150 (MQ=255) aTGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgatg > 2:5251330/1‑150 (MQ=255) aTGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgatg > 1:2616445/1‑150 (MQ=255) aTGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgatg > 1:2827849/1‑150 (MQ=255) gCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgatgat > 2:2840257/1‑150 (MQ=255) cc‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGatgatg > 1:1886604/1‑150 (MQ=255) cc‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGatgatg > 1:4626514/1‑150 (MQ=255) ttacggCATTGGGGGCCGCACCGGGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCa < 2:2535360/146‑1 (MQ=255) gTAAGGCAATTGGGGCCGCAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCa < 2:5400966/150‑1 (MQ=255) gTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCa > 1:2331016/1‑150 (MQ=255) ggccggggCCGCTTTGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAac > 2:625716/5‑150 (MQ=255) ggccggggCCGCTTTGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAac > 2:5447189/5‑150 (MQ=255) ggccggggCCGCTTTGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAac > 2:625796/5‑150 (MQ=255) ggccggggCCGCTTTGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAac > 2:625731/5‑150 (MQ=255) aaTTGGGGCCGCAAAGCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAac < 2:2696548/150‑1 (MQ=255) tGGGGCCGCAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccac < 2:1308340/150‑1 (MQ=255) gggggCCGCAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccac < 2:1308099/149‑1 (MQ=255) cggggCCGCTTTGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccac > 1:2759712/2‑150 (MQ=255) ggggCCGCAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACCGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccacc < 2:2938608/150‑1 (MQ=255) ggggCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccacc > 2:2962080/1‑150 (MQ=255) ggggCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccacc > 1:4937778/1‑150 (MQ=255) gggCCGCTTTGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACCTGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGGTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCt > 2:2190257/1‑150 (MQ=255) gCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGc > 2:456231/1‑150 (MQ=255) ccGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAg > 1:751907/1‑70 (MQ=255) ccGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAg < 2:751907/70‑1 (MQ=255) cGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCAt < 2:4937778/150‑1 (MQ=255) gCAAAGCGGCCCCGGCCCTCTAAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGACGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATg > 2:1763537/1‑150 (MQ=255) cAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATgg > 1:3268080/1‑150 (MQ=255) | GCTTTTCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAATTGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATGG > NC_002947/2792134‑2792431 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |