| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,792,284 | A→T | 8.8% | intergenic (‑72/+17) | PP_2442 ← / ← sstT | DUF480 domain‑containing protein/serine/threonine transporter SstT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,792,284 | 0 | A | T | 8.8% | 330.2 / 18.9 | 114 | intergenic (‑72/+17) | PP_2442/sstT | DUF480 domain‑containing protein/serine/threonine transporter SstT |
| Reads supporting (aligned to +/- strand): ref base A (74/27); new base T (6/4); total (80/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.55e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
TTCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATGGCA > NC_002947/2792138‑2792433 | ttCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGc < 1:835781/150‑1 (MQ=255) tCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGcg < 1:3759811/150‑1 (MQ=255) cGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGcgg > 2:2125781/1‑150 (MQ=255) cGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGcgg < 1:683016/150‑1 (MQ=255) cGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGcgg < 1:682825/150‑1 (MQ=255) cGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGcgg < 1:682772/150‑1 (MQ=255) gATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGcggc > 1:1308099/1‑150 (MQ=255) gATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGcggc > 1:1308340/1‑150 (MQ=255) gATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGACCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGcggc > 1:4289918/1‑150 (MQ=255) tCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCTTTGcggccc < 1:396859/150‑1 (MQ=255) tCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGcggccc < 2:1930126/150‑1 (MQ=255) tCAGCGAGCCGAGAACGCGGATCTCGAGGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGAAAT‑TGGGGCCGCAAAGcggccc < 1:5014830/150‑1 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGcggccccgg > 1:1461345/1‑150 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGcggccccgg > 1:3804993/1‑150 (MQ=255) cGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCTTTGcggccccaat < 2:3064076/150‑4 (MQ=255) gAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCTTTGcggccccaatt < 2:1409092/150‑5 (MQ=255) gAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGcggccccggcc > 1:3085630/1‑150 (MQ=255) gagaACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCtt > 1:1062648/1‑150 (MQ=255) gagaACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCtt > 1:2748036/1‑150 (MQ=255) ggATCTCGATGCTGTTGAAGCGGCCTTCACCAGCGG‑ATTCGTGTACTGACAAGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGACGCAAAGCGGCCCCGGCCCTCTTAGCCGAgg > 1:3932187/1‑150 (MQ=255) tcGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCgctg > 2:605543/1‑150 (MQ=255) gATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCgctgct > 1:3540065/1‑150 (MQ=255) gATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCgctgct > 2:4760181/1‑150 (MQ=255) tGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAGGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGa > 2:508707/1‑150 (MQ=255) gTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAg > 1:5136551/1‑150 (MQ=255) aaGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTg > 1:654604/1‑150 (MQ=255) cgcgcCCTACACCGGGGT‑TTTCGTGTTCTGACAGGGCCCTGTCTGGGGGGGGGGTAAAGGCCACTCGGGTTGGTAATGCC‑ATCGGTTACGCCATT‑TGGGGCCGAAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGa < 2:4862210/149‑1 (MQ=255) gCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGAc > 1:1853856/1‑150 (MQ=255) cgcgCCATCCCCCGGGGTTTTGGTTTTCTGACGGGGCCCTGTCGGGGGGCTGGGCATCGGCCACCGGGTTTGTTAATGCC‑AGGGC‑TAATGGAATGTGGGGCCGAAAGGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGa < 2:3383060/147‑1 (MQ=255) cTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGcc > 1:221914/1‑150 (MQ=255) cTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGcc > 1:1850901/1‑150 (MQ=255) ccccggggg‑TTTGGTGTTCGGCCTTGGCCCTGGCGGGGGGGGGGGTAAGGGCCCCTCGGGTTGTTAAGGCC‑CCCGCTTAGGCCATT‑GGGGGCCGCAAGGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCcgcg < 2:1669620/143‑1 (MQ=255) cccggctg‑TTTTGTGTTTTTACTGGGCCCTGTCGGGTGGCTGGGTAATGCCCATTTGGGTTGTTAATGCA‑TTGGTTTACGGAATT‑TGGGGCCCAAACGGGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCgg < 2:5190980/143‑1 (MQ=255) ccGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCa > 1:1682472/1‑150 (MQ=255) ccGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCa > 1:1166501/1‑150 (MQ=255) ccGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCa > 2:4182474/1‑150 (MQ=255) ccGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCa > 2:2039375/1‑150 (MQ=255) ttggttttCTTACTTGGCCGTGTCTGGTGGGGGGGTAAAGGCCACTAGGGTTGGTATTGCC‑TGCGGTTATGGAAAT‑GGGGGCCGCAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACa < 2:347790/144‑1 (MQ=255) tCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAg > 2:4133488/1‑150 (MQ=255) tgtTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGcac > 1:1499854/1‑150 (MQ=255) tgtTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGcac > 2:4093012/1‑150 (MQ=255) tCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATc > 1:4733903/1‑150 (MQ=255) tGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCgg > 1:4186814/1‑150 (MQ=255) gACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGt > 1:4191637/1‑150 (MQ=255) gACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGt > 1:4191556/1‑150 (MQ=255) ggCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCgaag > 1:4403906/1‑150 (MQ=255) ggCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCgaag > 1:4236625/1‑150 (MQ=255) ccgtGTCTGGTGGCTGGGGAAAGGCCACTTGGTTAGTTAATGCC‑ATGGCGTAAGGCATT‑TGGGGCCGCACAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCATATCGGTCgaagaa < 2:3151538/147‑1 (MQ=255) ccTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAAt > 1:4767666/1‑150 (MQ=255) cTGTCTGGTGGGGGGGCAATGCCCAATGGTGTTGTTATTGCC‑ACGGCGTAGGGATTT‑GGGGGCCGCAAGGCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAAtt < 2:4584239/150‑1 (MQ=255) tGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTc > 2:2014115/1‑150 (MQ=255) tGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTc > 2:2014133/1‑150 (MQ=255) gTCTGGTGGGTGGGTAACGGCCACTCGGTTAGTTACTGCA‑ATCGCTTATGGAATT‑TGGGGCCGCAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCa < 2:1682472/150‑1 (MQ=255) tctcGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCA‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAg > 2:4667917/1‑150 (MQ=255) tcGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAgcg > 1:4276245/1‑150 (MQ=255) tcGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAgcg > 2:3100314/1‑150 (MQ=255) gCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGGCGGTCCTGCCGCGGCAGTGACCCGCACCGCGGTCGAGGACTTCAGCGCCGtt > 2:5062596/1‑150 (MQ=255) gggAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCgg > 2:2091809/1‑150 (MQ=255) ggAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGc > 1:1642256/1‑150 (MQ=255) gAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGcc > 1:1020806/1‑150 (MQ=255) aaaGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCg > 1:3123751/1‑150 (MQ=255) acggCCACTTGGTTTGGTACTGCA‑AGCGCGTACGGAATT‑GGGGGCCCCAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGa < 2:227201/148‑1 (MQ=255) aGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAg > 2:4468540/1‑150 (MQ=255) ctcgggTTGTTATTGCC‑ATGGCTTACGGCATT‑TGGGGCCGCAACGCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGc < 2:2586044/147‑1 (MQ=255) tcgggTAGGTATTGCC‑ATCGCGTATGGCATT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCa < 2:5361658/148‑1 (MQ=255) ggtaATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGcc > 1:3833541/1‑150 (MQ=255) ccaattGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGcc > 2:4352101/6‑150 (MQ=255) ccaattGCC‑ATCGCGTAAGGCAAG‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGcc > 2:4439041/6‑150 (MQ=255) gtaATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCg > 2:1217613/1‑150 (MQ=255) ggtaTGCCAATCGCGTACGGAAAT‑GGGGGCCGCACCGCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGcc < 1:5420787/147‑1 (MQ=255) taATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCga > 2:1372746/1‑150 (MQ=255) aTGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgatg > 2:2796598/1‑150 (MQ=255) aTGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgatg > 1:2827849/1‑150 (MQ=255) aTGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgatg > 1:2616445/1‑150 (MQ=255) aTGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgatg > 2:5251330/1‑150 (MQ=255) gCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgatgat > 2:2840257/1‑150 (MQ=255) cc‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGatgatg > 1:1886604/1‑150 (MQ=255) cc‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGatgatg > 1:4626514/1‑150 (MQ=255) ttacggCATT‑GGGGGCCGCACCGGGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCa < 2:2535360/146‑1 (MQ=255) gTAAGGCAAT‑TGGGGCCGCAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCa < 2:5400966/150‑1 (MQ=255) gTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCa > 1:2331016/1‑150 (MQ=255) aaT‑TGGGGCCGCAAAGCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAac < 2:2696548/150‑1 (MQ=255) ggccggggCCGCTTTGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAac > 2:625796/5‑150 (MQ=255) ggccggggCCGCTTTGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAac > 2:625731/5‑150 (MQ=255) ggccggggCCGCTTTGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAac > 2:625716/5‑150 (MQ=255) ggccggggCCGCTTTGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAac > 2:5447189/5‑150 (MQ=255) tGGGGCCGCAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccac < 2:1308340/150‑1 (MQ=255) gggggCCGCAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccac < 2:1308099/149‑1 (MQ=255) cggggCCGCTTTGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccac > 1:2759712/2‑150 (MQ=255) ggggCCGCAACGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACCGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccacc < 2:2938608/150‑1 (MQ=255) ggggCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccacc > 1:4937778/1‑150 (MQ=255) ggggCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccacc > 2:2962080/1‑150 (MQ=255) gggCCGCTTTGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACCTGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGGTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCt > 2:2190257/1‑150 (MQ=255) gCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGc > 2:456231/1‑150 (MQ=255) ccGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAg > 1:751907/1‑70 (MQ=255) ccGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAg < 2:751907/70‑1 (MQ=255) cGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCAt < 2:4937778/150‑1 (MQ=255) gCAAAGCGGCCCCGGCCCTCTAAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGACGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATg > 2:1763537/1‑150 (MQ=255) cAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATgg > 1:3268080/1‑150 (MQ=255) aaGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATGGCa > 2:39143/1‑150 (MQ=255) | TTCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGG‑TTTCGTGTTCTGACATGGCCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCC‑ATCGCGTAAGGCAAT‑TGGGGCCGCAAAGCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATGGCA > NC_002947/2792138‑2792433 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |