| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,860,722 | T→G | 13.6% | intergenic (‑113/‑13) | PP_2510 ← / → PP_2511 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,860,722 | 0 | T | G | 13.6% | 331.5 / 5.0 | 134 | intergenic (‑113/‑13) | PP_2510/PP_2511 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (51/61); new base G (18/4); total (69/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.11e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 138 total aligned reads displayed.
CGCAGTTCACCCAGCGGAAAGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGACATCAGTGCTGATGATTTCGATGC > NC_002947/2860573‑2860871 | cGCAGTTCACCCAGCGGAAAGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTTACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCAt < 1:1271869/150‑1 (MQ=255)cGCAGTTCACCCAGCGGAAAGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCAt < 1:1822500/150‑1 (MQ=255) gCAGTTCACCCAGCGGAAAGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATg < 1:2642906/150‑1 (MQ=255) cAGTTCACCCAGCGGAAAGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATga < 2:2544177/150‑1 (MQ=255) gTTCACCCAGCGGAAAGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATgaga > 2:1771665/1‑150 (MQ=255) gTTCACCCAGCGGAAAGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATgaga < 2:1313570/150‑1 (MQ=255) aCCCAGCGGAAAGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGtt > 2:3440959/1‑150 (MQ=255) cGGAAAGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACAt < 2:812635/150‑1 (MQ=255) cGGAAAGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACAt < 2:3550569/150‑1 (MQ=255) cGGAAAGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACAt < 2:4385226/150‑1 (MQ=255) aaaGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCGGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTa < 1:3721119/150‑1 (MQ=255) aGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGTATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTAtt < 2:4032283/150‑1 (MQ=255) aGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTAtt < 1:4562441/150‑1 (MQ=255) aGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCAGTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAATCTTGTACGAGCCTGAGCGGTGGTAcgggtctg > 2:2159642/1‑143 (MQ=255) cgcgATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCaa < 1:2744229/150‑1 (MQ=255) aTCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTgg < 2:2051266/150‑1 (MQ=255) ttAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGccc > 2:2485205/1‑150 (MQ=255) ttAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGccc > 1:365463/1‑150 (MQ=255) tAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGACTTTCCTGGTTTCAGCTAACGTATACAAAAACTTGTACAAGCATGAGAGGGTGTACATGTATTGCAAGTGGCCCt > 2:4028568/1‑150 (MQ=255) gCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTc > 2:278207/1‑150 (MQ=255) aaaTCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCAc < 1:2237361/150‑1 (MQ=255) ccGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTg < 1:368300/150‑1 (MQ=255) cGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGt < 1:2957788/150‑1 (MQ=255) cGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGt > 1:5274716/1‑150 (MQ=255) gggTGCGGCGCTCGATCTCACCGGCAACACAAATCCCTCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACCGGGATTGCACGTGGCCCTTCACCCTGTa > 2:5014308/1‑150 (MQ=255) gcggcgCCCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTc < 1:2159642/150‑1 (MQ=255) cggcgCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCg < 1:4527360/150‑1 (MQ=255) cTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCAGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGgc > 1:4913624/1‑150 (MQ=255) aTCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGccg < 1:213423/150‑2 (MQ=255) ctcACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGc < 2:3326134/150‑1 (MQ=255) tcACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCt > 1:961572/1‑147 (MQ=255) tcACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCAGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGcc > 1:5360849/1‑150 (MQ=255) tcACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACATATACAAAAACTTGTACTAGCATGAGAGGTTGTACAGGGAGTGCAAGTGGCCCTTCACCCTGTACATCGACGGCGCCAGcc > 2:3630405/1‑150 (MQ=255) cACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGccc < 2:2511149/150‑1 (MQ=255) cGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCAGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCAtt > 1:57159/1‑150 (MQ=255) gCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATtgt < 1:489392/150‑1 (MQ=255) aaCACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTgc > 1:1159942/1‑150 (MQ=255) aaCACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTgc > 2:4122481/1‑150 (MQ=255) aaCACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTgc < 2:4634472/150‑1 (MQ=255) aaCACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTgc > 1:2988447/1‑150 (MQ=255) aaCACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCAGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTgc > 1:1159936/1‑150 (MQ=255) acaAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCt > 1:3999942/1‑150 (MQ=255) aTCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCggg < 1:4817631/150‑1 (MQ=255) tCCATCGGCGCGCCCCCAGCCCCCCAGTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGga < 2:5037235/150‑1 (MQ=255) ccATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCCGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGgag > 1:3887206/1‑150 (MQ=255) aTCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGAt < 2:3313207/150‑1 (MQ=255) aTCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCAGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGAt > 1:4467514/1‑150 (MQ=255) tCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATa > 1:1228403/1‑150 (MQ=255) tCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATa < 2:4229328/150‑1 (MQ=255) tCGGCGCGCCCCCAGCCCCCCATTGAGAATTTCCTGGTTTCAGCTAACATATACAAAAACTTGTACAAGCAGGACAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATa > 1:1853065/1‑150 (MQ=255) cGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGAtcg > 2:5244586/1‑148 (MQ=255) ggCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGc > 2:937828/1‑150 (MQ=255) gcgcgcCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGcc < 2:2022101/150‑1 (MQ=255) gcgcCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCtt > 1:2547641/1‑150 (MQ=255) gcCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCAGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTcc > 1:4202371/1‑150 (MQ=255) cccAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTgc > 1:2500795/1‑150 (MQ=255) ccAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGATGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTgcg > 2:1640866/1‑150 (MQ=255) ccAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGa > 2:362615/1‑108 (MQ=255) ccAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGa < 1:362344/108‑1 (MQ=255) ccAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCAGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTACCTgcg > 1:3262662/1‑150 (MQ=255) cAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTgcgc < 2:3128879/150‑1 (MQ=255) ccccccATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAgg < 1:3357672/150‑1 (MQ=255) aTTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCg < 2:13520/150‑1 (MQ=255) ttGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGa > 2:5346167/1‑150 (MQ=255) gAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑gg > 2:2654997/1‑150 (MQ=255) gAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCAGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑gg > 1:570559/1‑150 (MQ=255) aaTTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑ggg < 1:3497016/150‑1 (MQ=255) aTTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATgag < 1:2809215/47‑1 (MQ=255) aTTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATgag > 2:2809215/1‑47 (MQ=255) tGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGc > 2:194808/1‑150 (MQ=255) tttCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCa > 2:758453/1‑150 (MQ=255) tttCAGCTAACTTATACAAAAACTTGTACAAGCAGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCa > 1:4351205/1‑150 (MQ=255) gCTAACTTATACAAAAACTTGTACAAGCAGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTg < 2:3883781/150‑1 (MQ=255) cTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACTTGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGAAATCGACC‑GGGGGAAAGCTCATCCTgg < 2:590088/150‑1 (MQ=255) tAACTTATCCACCACCTTGTACACGCAGGCGAGGTTGTACATGTAGTGCACGTGGCCCTTCACCCTGTCCTGCGACGGCGCCTGCCCCTGGGGCGCTCGGGCGAGAGCCTTCCTGCGCAGGCACTCGACC‑GGGGGAAAGCTCATCCgggg < 2:4712796/150‑2 (MQ=255) aaCTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGtt < 2:2971933/150‑1 (MQ=255) aaCTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGtt < 2:5274716/150‑1 (MQ=255) aaCTTATACAAAAACTTGTACAAGCAGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACAGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGtt < 2:723526/150‑1 (MQ=255) aCTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTg > 1:1851484/1‑150 (MQ=255) cTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGa < 2:697087/150‑1 (MQ=255) cTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGGGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGa < 2:3699009/150‑1 (MQ=255) ttATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCtt > 2:4979878/1‑107 (MQ=255) ttATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGAc > 2:3819899/1‑150 (MQ=255) ttATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTAGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGAc > 1:3160914/1‑150 (MQ=255) ataCAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGACAt > 2:3794666/1‑150 (MQ=255) ataCAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGACAt < 2:2658706/150‑1 (MQ=255) taCAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCt < 1:1844229/76‑1 (MQ=255) taCAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCt > 2:1844229/1‑76 (MQ=255) cAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGACATCAg > 2:1865253/1‑150 (MQ=255) aaaaaCTTGTACACGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTGGGGAGATAGCCTTCCTGCGCTGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGACATCAGt < 1:5116709/150‑1 (MQ=255) aaaaaCTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGACATCAGt > 2:1209089/1‑150 (MQ=255) aaaaaCTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGACATCAGt > 2:1209131/1‑150 (MQ=255) aaaaaCTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGACATCAGt > 2:901003/1‑150 (MQ=255) aaaaaCTTGTACAAGCAGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGACATCAGt > 1:4496358/1‑150 (MQ=255) aaaCTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGAc < 1:4718201/117‑1 (MQ=255) ttGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACCAGGGGGAAAGCTCATCCTGGTTGACATCAGTGCtga < 2:1079442/150‑1 (MQ=255) ttGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACCAGGGGGAAAGCTCATCCTGGTTGACATCAGTGCtga < 2:1079451/150‑1 (MQ=255) ttGTACAAGCAGGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGACATCAGTGCtgat > 1:3368407/1‑150 (MQ=255) aaGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGACATCAGTGCTGATGATTTc > 2:1454226/1‑150 (MQ=255) aaGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCACATCCTGGTTGACATCAGTGCTGATGATTTc > 1:4312615/1‑150 (MQ=255) | CGCAGTTCACCCAGCGGAAAGGCCGCGATCTTAGCAAATCCGGGTGCGGCGCTCGATCTCACCGGCAACACAAATCCATCGGCGCGCCCCCAGCCCCCCATTGCGAATTTCCTGGTTTCAGCTAACTTATACAAAAACTTGTACAAGCATGAGAGGTTGTACATGTATTGCAAGTGGCCCTTCACCCTGTACTTCGACGGCGCCTGCCCATTGTGCGCTCGGGAGATAGCCTTCCTGCGCAGGCAATCGACC‑GGGGGAAAGCTCATCCTGGTTGACATCAGTGCTGATGATTTCGATGC > NC_002947/2860573‑2860871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |