| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,943,669 | A→G | 5.1% | intergenic (+24/+22) | PP_2574 → / ← PP_2575 | LysR family transcriptional regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,943,669 | 0 | A | G | 5.1% | 638.1 / 13.4 | 196 | intergenic (+24/+22) | PP_2574/PP_2575 | LysR family transcriptional regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (91/95); new base G (4/6); total (95/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 206 total aligned reads displayed.
GACATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCGCGCCGGTCCTGGCGCCGGTCCTGACGCTGGCGCATGC > NC_002947/2943520‑2943812 | gACATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGTAGAGCTGGCGAAGTTCCTGAAGTGAGCACGGCATGCCACCCCGGCAGGa < 2:802617/150‑1 (MQ=255)gACATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGa > 1:1137143/1‑150 (MQ=255)gACATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGa < 1:761376/150‑1 (MQ=255)gACATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGa > 2:5322194/1‑150 (MQ=255)gACATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGa > 2:1830423/1‑150 (MQ=255)gACATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGa < 1:3317713/150‑1 (MQ=255)gACATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGa < 2:3584284/150‑1 (MQ=255) aTTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTa < 2:891361/150‑1 (MQ=255) gCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCTACTCCTGCCGGGGTGGCa < 2:5043732/150‑1 (MQ=255) gCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCCGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCa > 1:2965039/1‑150 (MQ=255) ccGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGCAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCAt < 2:2534424/150‑1 (MQ=255) gCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCTACTCCTGCCGGGGTGGCAtggcg < 1:1811255/150‑1 (MQ=255) ccGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCAtggcgt < 1:2170302/150‑1 (MQ=255) cGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCTACTCCTGCCGGGGTGGCAtggcgtg < 1:3586420/150‑1 (MQ=39) ggCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGa > 1:5006052/1‑150 (MQ=255) gcgcTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGAt < 1:1660384/150‑1 (MQ=255) gcgcTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGAt > 2:5228920/1‑150 (MQ=255) cgcTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGAtt < 2:2800561/150‑1 (MQ=255) gcTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTg > 1:4435322/1‑150 (MQ=255) tGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCt < 1:1907564/150‑1 (MQ=255) cGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAg < 1:2204430/150‑1 (MQ=255) ggggCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAgg > 2:3229132/1‑150 (MQ=255) ggggCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAgg < 2:2984991/150‑1 (MQ=255) gggCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAggg > 2:1875509/1‑150 (MQ=255) ggctgCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGa > 2:272312/1‑150 (MQ=255) ggcgTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGa > 1:2430730/1‑112 (MQ=255) ggcgTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGt < 2:3663896/150‑1 (MQ=255) gcgTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTa > 2:1203898/1‑150 (MQ=255) ggTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCcg > 2:2241208/1‑150 (MQ=255) ttGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCcgcg > 1:3548959/1‑150 (MQ=255) ttGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCcgcg > 1:3634640/1‑150 (MQ=255) ttGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCcgcg > 1:3194272/1‑150 (MQ=255) gAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGcc < 1:2241208/150‑1 (MQ=255) gAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGcc > 1:535729/1‑150 (MQ=255) aGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTa > 2:5013031/1‑104 (MQ=255) aGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCt > 1:3004833/1‑150 (MQ=255) gCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCtt > 1:3868365/1‑150 (MQ=255) cGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTg < 2:4599668/150‑1 (MQ=255) aGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCa < 1:1237649/150‑1 (MQ=255) tCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAgg < 2:2057243/150‑1 (MQ=255) tCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAgg > 2:2331119/1‑150 (MQ=255) cAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCa > 1:1061302/1‑150 (MQ=255) aCCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCt < 2:5257450/150‑1 (MQ=255) aCCAAACCGGCGCAGTTGTTCGTGGAGTTTGGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCt < 1:26640/150‑1 (MQ=255) cAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGt > 2:2100765/1‑150 (MQ=255) aaCCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAg > 2:541593/1‑150 (MQ=255) aaCCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAg < 2:535729/150‑1 (MQ=255) aCCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAgg < 2:3610056/137‑1 (MQ=255) ggCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCAc < 2:1549815/150‑1 (MQ=255) ttgttCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATg < 1:5322194/150‑1 (MQ=255) tgttCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATgg < 1:49667/150‑1 (MQ=255) tgttCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATgg < 2:2124527/150‑1 (MQ=255) tgttCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATgg > 2:691840/1‑150 (MQ=255) ttCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAgg < 2:1050778/124‑1 (MQ=255) gTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCta > 2:5213264/1‑101 (MQ=255) gTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCta < 1:5213264/102‑2 (MQ=255) tGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTgg > 2:3355767/1‑150 (MQ=255) aGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGtt < 2:2994199/150‑1 (MQ=255) ttttGTCGTGAAGAGCTGGCGAAGGTCCTGAAGTGAGCACGCCATGCCCCCCCGTCTTGAGTAGCATGGCGTGGGGATTGCTGTGGGGTTGAGCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGGACTGGCATTGGCCTGGGtttt < 1:5426572/150‑1 (MQ=255) ttttGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGtttt > 1:3968651/1‑150 (MQ=255) tttGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTg < 1:4171675/150‑1 (MQ=255) tttGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTg < 1:1546977/150‑1 (MQ=255) tttGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTg < 1:3135319/150‑1 (MQ=255) tttGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTg < 1:3259652/150‑1 (MQ=255) ttGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTgg < 2:1741288/150‑1 (MQ=255) gTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGcc > 2:2626718/1‑150 (MQ=255) tCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCt < 1:4071859/150‑1 (MQ=255) gggAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCt < 1:3094723/136‑1 (MQ=255) gggAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCt > 2:3094723/1‑136 (MQ=255) ggAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGt > 1:4821847/1‑150 (MQ=255) gAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAggg > 1:5149161/1‑78 (MQ=255) gAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTc < 1:1049098/150‑1 (MQ=255) gAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTc < 2:1297243/150‑1 (MQ=255) aaGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTcc < 1:3474322/150‑1 (MQ=255) agagCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCt < 1:4352188/150‑1 (MQ=255) tGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTcg > 2:1172777/1‑150 (MQ=255) cGAAGTTCCTGAAGTGGGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCgcgc < 1:2949784/150‑1 (MQ=255) aaGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCgcgccg > 2:4184739/1‑150 (MQ=255) aGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCgcgccgg < 2:4730453/150‑1 (MQ=255) aGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCgcgccgg < 2:1866194/150‑1 (MQ=255) ttCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCgcgccggtc < 1:2440162/150‑1 (MQ=255) ttCCTAAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCgcgccggtc > 1:3492056/1‑150 (MQ=255) cTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGTCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCgcgccggtcctg > 1:3640024/1‑150 (MQ=255) cTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCgcgccggtcctg < 2:2192688/150‑1 (MQ=255) tGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGtt > 1:4747965/1‑120 (MQ=255) tGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCgcgccggtcctggcgccg < 2:3492056/150‑1 (MQ=255) tGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCgcgccggtcctggcgccg < 2:5091683/150‑1 (MQ=255) aCGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCgcgccggtcctggcgccggtcct > 1:4221062/1‑150 (MQ=255) aCGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCgcgccggtcctggcgccggtcct > 1:1474581/1‑150 (MQ=255) aCGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCgcgccggtcctggcgccggtcct > 1:3879839/1‑150 (MQ=255) gCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCGCGCCGGTCCTGGCGCCGGTCCTGa > 1:2640422/1‑150 (MQ=255) cATGCTACTCCTGCCGGGGTGGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCGCGCCGGTCCTGGCGCCGGTCCTGACg > 1:2872694/1‑150 (MQ=255) aTGCTACTCCTGCCGGGGTGGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCGCGCCGGTCCTGGCGCCGGTCCTGACGc > 2:3599425/1‑150 (MQ=255) tGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCGCGCCGGTCCTGGCGCCGGTCCTGACGCt > 2:3362609/1‑150 (MQ=255) aCCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCGCGCCGGTCCTGGCGCCGGTCCTGACGCTGgcg > 1:832016/1‑150 (MQ=255) ccccGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCGCGCCGGTCCTGGCGCCGGTCCTGACGCTGgcgc < 1:2618658/150‑1 (MQ=255) cccGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCGCGCCGGTCCTGGCGCCGGTCCTGACGCTGGCGCa > 2:5073821/1‑150 (MQ=255) cccGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCGCGCCGGTCCTGGCGCCGGTCCTGACGCTGGCGCa < 2:138409/150‑1 (MQ=255) cGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCGCGCCGGTCCTGGCGCCGGTCCTGACGCTGGCGCATg < 2:4918371/150‑1 (MQ=255) ggCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCGCGCCGGTCCTGGCGCCGGTCCTGACGCTGGCGCATGc < 2:4036332/150‑1 (MQ=255) | GACATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAGGAGTAGCATGGCGTGGCGATTGCTCAGGGGTTGACCTGGTAGCCGCGCCCTTGCAGGCAACCGCTGTAGGCACTGGCATGGGCCTGGGTTTTGGCCTCGTCCTGGTCGCGCCGGTCCTGGCGCCGGTCCTGACGCTGGCGCATGC > NC_002947/2943520‑2943812 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |