| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,055,186 | G→T | 20.4% | intergenic (+22/+24) | PP_2664 → / ← agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,055,186 | 0 | G | T | 20.4% | 152.0 / 7.9 | 98 | intergenic (+22/+24) | PP_2664/agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Reads supporting (aligned to +/- strand): ref base G (32/38); new base T (12/8); total (46/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGAT > NC_002947/3055038‑3055332 | ggTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGa > 2:681831/1‑150 (MQ=255)ggTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCCCATCGCGGGTTgt > 2:1947451/1‑149 (MQ=255) tCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATc < 1:1165825/150‑1 (MQ=255) tCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATc < 1:165117/150‑1 (MQ=255) aaCTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGATCcg > 2:3090592/1‑150 (MQ=255) tACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGa > 2:1522288/1‑150 (MQ=255) aCAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCCGGGTTATCcccgca > 1:4837134/1‑148 (MQ=255) aCAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTCGGCCGCTTCGCGGATCAACCCGCGaa < 2:251361/150‑1 (MQ=255) aGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGc < 1:4880538/150‑1 (MQ=255) aGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGc < 1:1677329/150‑1 (MQ=255) aGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGc < 1:3158089/150‑1 (MQ=255) cAACGATCTCACGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAACCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGCgg < 1:3650166/150‑1 (MQ=255) cAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCgg < 1:3477676/150‑1 (MQ=255) cAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCgg > 2:4114134/1‑150 (MQ=255) cAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGCgg < 2:2553637/150‑1 (MQ=255) cAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGCgg < 2:2553456/150‑1 (MQ=255) cAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTGGCGGGTTTGTCCCCGTAGccg > 1:4222592/1‑148 (MQ=255) aCGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGc > 2:4292919/1‑146 (MQ=255) aCGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGc < 1:4292919/146‑1 (MQ=255) tctcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTGGCGGGGTTGTCCGCGCAGCGGCCgggg > 1:201271/1‑148 (MQ=255) tcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGTTTGGCCGCTTCGCGGGTTGATCCGCGACGCGGCCGGAACa < 2:1800259/150‑1 (MQ=255) tcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCCCGGCGCGGGGTGTTCCGCGCAGCGGCCGGGAcc > 1:2538291/1‑149 (MQ=255) gcagaaGATCCGCGAACTGGGTCACACGCTTATGCACAAGCCCGTAAGACCGATGAACCTAAAGCCGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGAATAGCGTTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTc < 1:4085707/150‑1 (MQ=255) agcagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTAGCGGGGTTTTGCGCGAAGCGGCCCGGCCAGCGCaa > 1:1238022/1‑150 (MQ=255) ccGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGATCCGCGAAGCGGCCGGAACAGCTCAACCgcgcc > 2:3372042/1‑149 (MQ=255) cgcgAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTGGCGGGTTGGTGACCGCAGCGGCCGGGACAGCAGAACggaaaag > 1:1634276/1‑145 (MQ=255) gcgAACTGGGTCACACGCTGATGCACACGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGa < 2:5399325/150‑1 (MQ=255) gcgAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGGCGCGTGGCGGGTTGTTGCGCGAACCGGCCCGGACACCACAACGGCGCCGa > 1:5029170/1‑150 (MQ=255) gcgAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGa > 2:4301726/1‑150 (MQ=255) gcgAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCCGCGCGGGGTGTTGCGCCAAGCGGCCCGCACCACACAACCgcgcccc > 1:5029113/1‑147 (MQ=255) cgAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTGGTCCGCGAAGCGGCCGGGCCAGCGCAAACGCGCCGAt > 1:4645961/1‑150 (MQ=255) cTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGaaaaac > 2:428337/1‑148 (MQ=255) tGGGTCACACGTTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGGGATGAGCAATCTGCTGGCCAGTGGCTTGGCTTCGGGGTTGGCCGCTTCGCGGGTTTATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCa < 1:4889601/150‑1 (MQ=255) tGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCa > 2:4059653/1‑150 (MQ=255) tGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCa > 2:4059561/1‑150 (MQ=255) tGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTTATACCCGAAGCCGCCGGGACACCGCAAACGCGCCGCTaaaaa > 1:1580344/1‑147 (MQ=255) ggggTCACACGCTGATGCACACGCCCGTAAGACCGATGAAACTCAAGACGGGGTTGCGCCATCTGGTGGCCTGTGGCTTGGCTTTGGGGTTGGCGGCTTCGGGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCa < 1:2253778/149‑1 (MQ=255) ggggTCACACGCTGATGCACAAGCCCGAAAGACCGATGACACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCa < 2:3968359/149‑1 (MQ=255) gggTCACACGCTTATGCACACGCCCGAAACACCTATTAAACACAAGCCGGCGATGACCCATCTGCTGGCCTGTGGCTTGGAATTGCGTTTGGCGGCTTCGGGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAg < 2:273521/150‑1 (MQ=255) gggTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCATGGCGGGTTGATCCGCGAAGCGGCCGGAACAGCGCAACGGCGCAGATAAACAg > 1:4029753/1‑150 (MQ=255) gggTCACACGCTGATGCAAAAGCCCTTAAGACCTATTAAACTCAAGACGGCGATTAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGTTTGGCCGCTTCGGGGTTTTTTCCGCTAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAg < 2:273359/150‑1 (MQ=255) tCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGTTACGCGAAGCGGCCGGAACAGCTCAACGGCGCAGAAAAAAAGCaa > 2:2915468/1‑150 (MQ=255) acacGCTGATGCACAAGCCCGTACGACCGATTAAACACAAGACGGCGAGGAGCCAACTGAGGGCCCGTGCCTGGCCATGCCGGTTGGCCCCTTCCGGGGTTGTTCCCCCAGGGGGCCGGAACCGCCCAACGGCCCCGATAAAAAGCaaaa > 2:2566709/1‑150 (MQ=255) acacGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCaaag > 2:4084300/1‑149 (MQ=255) ccGCTGAGGCACAAGCCCGTAAGACCGATGAAACTCACGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGCCCCGCCAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATc < 2:2864174/149‑1 (MQ=255) acGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGATCCGCGACGCGGCCCGAACACCTCAACCGCGCAGATAAAAACCAAAATc > 2:2453952/1‑150 (MQ=255) acGCTGAGGCACAAGCCCGTAAGACCTTTGAAACTCACGCCGGCTATGAGCCATCTGGTGGCCTGTGGCTTGGAATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATc < 2:4090841/150‑1 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGGCCCGTGGGGGGGTGTTACCCCCAGCCGCCGGGACACCACCAACCCGCAGATAAAAAGCaaaaacaa > 1:255542/1‑146 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCAATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGa < 1:4496159/150‑1 (MQ=255) ctttggCACACGCCCTTACGACCGAGGAAACTCACGACGGCGCTGAGCCATCTGCGGGCCAGTGGGTTGGCATAGGGTTGGGCCGCTTCGGGGGTTTATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGat < 2:726037/145‑1 (MQ=255) tgatgaACACGCCCGTAAGACCGATGAAACGCACGACGGCGTTGAGCAATGTGCTGGCCAGTGGCTTGGCATCGCGGTTGGCCGCTTCGGGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGata < 2:2453970/150‑1 (MQ=255) gATGCACACGCCCTTTAGACCGATGAAACTCAAGACGGCGATGAGCCTTGTGGTGGCCAGTGGCTTGGCTTAGCGTTTGGCGGCTTGGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGatat < 2:3470103/150‑1 (MQ=255) aaGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGTTACGCGAAGCCGCCGGAACAGCGCAACGGCGCACAAAAAAAGCAAAAAAGATATAGCCAGc > 1:800569/1‑150 (MQ=255) aaGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCGCAACGGCGCAGATAATAAGCAAAAACGATATCGCCAGc > 2:2474611/1‑150 (MQ=255) aGCCGGTATGACCGATGAAACTCATGAGGGGGATGCGCCATGTGCTGGCCAGGGGGTTGGCATAGGGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCa < 2:2971798/150‑1 (MQ=255) aGCCCTTAAGACCGTTGAAACTCAAGACGGCGATGAGCCTTCTGCTGGCCAGTGGCTTGGCATTGCGTTTGGCCGCTTCGGGGTTTGATCCGCTAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCa < 2:3861154/150‑1 (MQ=255) gCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAAACAGCAAAATAGAAATAGCCAGCAc > 1:4979960/1‑150 (MQ=255) cGTACGACCGCTGAACCTCAAGACGGCGATGAGCCTTCGGCTGGCCAGGGGCTTGGCATAGGGGTTGGCCGCGTCGGGGGTTGAGCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGa < 2:4585978/150‑1 (MQ=255) ccGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTTTTGCGCCAAGCGGCCGGCAACGCACAACGGCGCCGATAATAAGCAAAAAAGAAATAGCCACCACAGAGGATgtg > 1:3426067/1‑148 (MQ=255) cGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGCAGCGGCCGGAACAGCTCCACGGCGCCGATAATCAGCAAAATCGATATAGCCAGCACGGAGGATGGCt > 2:4385648/1‑150 (MQ=255) cGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGGAGCCGGTTGATACCCGAAGCCGCCCGCAACCCTCAAACGCGCACAAAAAAACCAAAAAAGAAAAAGCCACCACAGAGGATgtcg > 1:1181458/1‑147 (MQ=255) aaccAAGCCGGCGTTGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGTTTGGCCGCTTCGCGGTTTTATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TAccc < 1:859255/147‑1 (MQ=255) aCTCAAGCCGGCGATGAGCCATCTGCTGGCCTGTGGCTTGGCATTGCGGTGGGCGGCTTCGCGGGTTTATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TAccc < 1:859073/150‑1 (MQ=255) aCTCAAGACGGCGATGAGCCATCTGCTGGCCTGTGGCTTGGCATTGCGGTTGGCCGCTTCGCGGTTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TAccc < 1:858990/150‑1 (MQ=255) gtcttgccGGCGATGAGCCATGTGCTGGCCAGGGGCTGGGCATCGCGGTGGGCCGCTCGGCGGGTTGAGCGGGTAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCg < 2:2104614/143‑1 (MQ=255) tCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTTATCCGCGGAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACGGAGGATTGCTTG‑TTCCCgg > 2:3395951/1‑150 (MQ=255) tCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTTATACGCGAAGCGGCCGGAACAGCTCAAAGGCGCAGATAATAAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCgg > 2:1397904/1‑150 (MQ=255) aaGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTTGTCCGCGGAGCGGCCGGCACAGCGCAAAGGCGCAGATAATCAGCAAAAACGAAATCGCCAGCAAGGAGGATGGCGTG‑TACCCGGtt > 2:1619498/1‑150 (MQ=255) ggCGATGAGCCATCTGCTGGCCTGTGGCTTGGCATCGCGGTTGGCCGCTTCGCGGGTTTATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGca < 2:1982651/150‑1 (MQ=255) gAGCAATCTGCTGGCCAGTGGCTTGGCATTGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGa < 2:2077758/150‑1 (MQ=255) ccATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCATAGCGGGGTGATCCGCGAAGCGGCCCGAACAGCTCAACGGCGCAGATAAACAGCAAAATCGAGATCGCCAGCACAGAGGATGGCTTG‑TACCCGGTTGTGCACCTTGAGtt > 2:2138309/1‑150 (MQ=255) cATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGttt < 2:2629615/150‑1 (MQ=255) tgtgggggCCTGGGGATTGGCTTCGGGGTTGGCCGCTTGGGGGTTTGACCGGCCACGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTgc < 1:1432619/144‑1 (MQ=255) tgtgctgGCCAGTGGCTTGGCATTGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTgc < 1:2172191/148‑1 (MQ=255) tCTGCTGGCCTGTGGGTTGGCATCGGGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTgc < 2:2940560/150‑1 (MQ=255) tCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTgc < 2:3306130/150‑1 (MQ=255) tCTGCGGGCCAGGGGATTGGCATTGGGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTgc < 1:4084309/150‑1 (MQ=255) tgctgGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCCCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCCGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTgcgc > 2:2172319/1‑150 (MQ=255) tgGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTTTTACCCGAAGCGGCCGGAAAAGCTCAACGGCGCAGAAAAAAAGCAAAAAGGCAATCGCCCACACTGAGGGTGGCTTGTTACCCGGTT‑TGCACCTTTCGTTTTCGCaaa > 2:235163/1‑150 (MQ=255) ggCCTGTGGCTGGGCATAGCGGTTGGCCGCTTGGCGGTTTTATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCaaaa < 2:233151/150‑1 (MQ=255) cAGTGGCTTGGCATAGCGGTTGGCCGCTTAGCGGGTTTATACCCGAAGCGGCCGGAACAGCTCAAACGCGCACATAATCAGCAAAAAAGATATAGCCACCACTGAGGATGGGTTG‑TACCCGGTTGTGCAAAATGAGTTTTCGCAAAAtag > 2:3393545/1‑148 (MQ=255) gTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGcc < 1:4983351/150‑1 (MQ=255) gCATAGCGGTTGGCCGCTTCGCGGGTTTATACGCGAAGCGGCCGGAACAGCTCAACCGCGCACAAAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCCGTTGTTCACATTGAGTTTTCGCAAAAAAGCCGAAACGTg > 2:2127036/1‑150 (MQ=255) gtttgtggTGGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTgg < 2:4068397/144‑1 (MQ=255) cATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTgg < 2:4837134/150‑1 (MQ=255) tAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGc < 2:5129523/150‑1 (MQ=255) ggCCGCTTCGCGGATCAACCCGCGAACCGGCCGGAACCGCTCAAAGGCGCAGATAATCAGCAAAATCGATATCGCCCGCACTGAGGATGGCTTT‑TACCCCGGTGTTCACAATGAGTTTGCGCAAAATCGCCGAAACGAGGGCCTTGCCgg > 1:591503/1‑150 (MQ=255) ggCCGCGTCGCCGATAAAACCGCGAAGCGGCCGGAACAGCGCAAAGGCGCAGATAATCAGCAAAAAAGATATCGCCAGCATGGAGGATGGCTTG‑TACCCCGTTTTGCACAATGAGTTTGCGCAAAAAAGCCGCAACGTGGGCCGTTACgg > 1:54075/1‑150 (MQ=255) ccGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAg < 2:430357/83‑1 (MQ=255) ccGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAg > 1:430357/1‑83 (MQ=255) ccGATTGGCGGGTTGAGCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 1:4114134/150‑1 (MQ=255) acGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATAGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGTGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg > 2:3345014/2‑150 (MQ=255) cGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtgg > 1:5412443/1‑150 (MQ=255) gCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 2:2520988/1‑150 (MQ=255) tCGCGGGTTTATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTc < 1:3090592/150‑1 (MQ=255) gcgGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGCCGGTGGTTTCgg < 1:4059653/150‑1 (MQ=255) gcgGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCgg < 1:4059561/150‑1 (MQ=255) cgGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGc < 2:495756/150‑1 (MQ=255) gTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGAt < 2:876840/150‑1 (MQ=255) | GGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTG‑TACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGAT > NC_002947/3055038‑3055332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |