| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,056,698 | A→C | 9.2% | intergenic (‑208/+100) | PP_2666 ← / ← PP_2667 | hypothetical protein/ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,056,698 | 0 | A | C | 9.2% | 261.9 / 13.0 | 91 | intergenic (‑208/+100) | PP_2666/PP_2667 | hypothetical protein/ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (33/49); new base C (7/2); total (40/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.96e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACGATAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGATCG > NC_002947/3056551‑3056847 | acgaTAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGc < 1:2883759/150‑1 (MQ=255) aGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGccc < 2:5407525/150‑1 (MQ=255) gACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGGGGGGCGTCGGGAAGGGGGCGCGCCGCGGcccc > 2:2311048/1‑150 (MQ=37) aGTAAATGCAGTACTAAAGTAGTAGATGGTCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCTGCGCGGccctttc < 2:486020/150‑5 (MQ=37) aGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGGCGGGGGGGCCCCAAGGGCCGCGCCGCCGcccccgc > 2:591531/1‑147 (MQ=25) aaTGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCGTGCGGCGCGAAAGGGGCGCCCCCCGGCCCCacgcgcg > 2:5382248/1‑144 (MQ=37) aTGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGAtctc < 1:864243/150‑1 (MQ=255) tGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCg < 1:1675166/150‑1 (MQ=255) agtagtAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCAt < 1:5283079/150‑1 (MQ=255) gtagtaGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATa < 1:3816784/150‑1 (MQ=255) gCCTGGCGACTGTAGGCTTGTAGACGCCGTAGGGAGAAACTGTATTGCTGAATTTCTGATAGCTGGCGCGATCCCTGTGGGAGCGGACTTGCGTCGCGATAGGGCCGCGCAGCGGCCCCTGGATCTCGGCATCATTCATAGATTGCTggg < 2:2355845/150‑1 (MQ=25) gcgcCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGGCGAGCGGCGCGCAATGGCCCCCCACCGGCCCCCCCATCGCGGCCGCAAGCAAAGAGTTCAGGGGgcgc > 2:4077599/1‑150 (MQ=16) cgcCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCt < 2:3810334/150‑1 (MQ=255) tGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGc < 2:7002/150‑1 (MQ=255) tGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCGGGCGGCGCGCCACGGCCCCGCAGCCGCCCCACGCTCGCGGCCACAAGCAGAGCTTGCTGGGGCCGCGTTGc > 2:1261693/1‑150 (MQ=21) gAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCg < 1:2301022/150‑1 (MQ=255) aGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCACGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGc < 1:1007165/150‑1 (MQ=255) ggCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGcc < 1:973898/150‑1 (MQ=255) aTGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCAAAGCGGcccca < 1:176358/150‑3 (MQ=255) ggAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATc < 2:840630/150‑1 (MQ=255) agaCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATcgc < 2:1356993/150‑1 (MQ=255) cGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGac < 1:2406086/150‑1 (MQ=255) cccTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGacac < 1:5264718/150‑1 (MQ=255) cccTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGacac < 2:2145862/150‑1 (MQ=255) cccTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGacac < 2:1327869/150‑1 (MQ=255) gCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCt < 1:1261693/150‑1 (MQ=255) ttGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACgg < 1:2664957/150‑1 (MQ=255) tttCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGGCGTTCGGGGCGGAAGGGCCCCGCCGCCGCCCCCCGGTCGCCGCAACATGCAAAAATTGGGGGGGGCGCGTTGGGGGCCCAACCCGACCCAAGGCCCCACCCACCCCGGGTAacac > 2:4448267/1‑150 (MQ=255) tCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAgg > 2:3641095/1‑68 (MQ=255) tCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAgg < 1:3641095/68‑1 (MQ=255) cTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCa < 1:4884176/150‑1 (MQ=255) gAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTggg < 2:569022/93‑1 (MQ=255) gAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTggg > 1:569022/1‑93 (MQ=255) aaaGCTGGCGCGATCCCTGTGGTAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGCCCCCAGGATCACGGCATCATCAATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGCCCGCTCCCA‑CACGGGTTACACGCCAGGt < 1:3723227/150‑1 (MQ=38) gCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGtttt < 2:3768635/150‑1 (MQ=255) gCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGtttt < 2:3767433/150‑1 (MQ=255) gcgcGATCCCTGTGGGAGCGGCCGTGCGGCGCGAAAGGGCCGCGCAGCGGCCCCCGGGTCTCGGCGTCAAGCAAAGTTTGGTGGGGGCCCGGTGGGGGCCCAAAGCGACACCAAGCCCCGCCCA‑CACCGGGTAGACGCCCGGGTTTGAgc > 2:5000089/1‑150 (MQ=255) tgGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCa < 1:1739402/150‑1 (MQ=255) cGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTg > 2:5224739/1‑150 (MQ=255) ggCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGc > 2:4734160/1‑150 (MQ=255) ggCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAAACGCGACACAAGGCCGCTCCCA‑CACGGGTTACACCCCAGGTTTTAAGCGCGGCTTGCgcagcgcagc > 1:5073725/1‑150 (MQ=255) gCCGTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGGGTTCGGCGCGGGTTGCGCCGCGCTGCa > 1:2367150/1‑150 (MQ=37) ccTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCAt > 1:1631366/1‑150 (MQ=255) ccTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCAt > 2:3586936/1‑150 (MQ=255) ccTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCAt > 2:4402497/1‑150 (MQ=255) cTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAAACGCGACACAAGGCCGCTCCCA‑CACGGGTTACACCCCGGGTTTTCAGCGCGGCTGGCGCAGCGCTGCATg > 1:627769/1‑150 (MQ=255) ttGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGc > 2:885462/1‑150 (MQ=255) ttGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGc > 1:5445214/1‑150 (MQ=255) gCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTg > 2:2612339/1‑150 (MQ=255) gCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTg > 1:39280/1‑150 (MQ=255) gCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTg > 2:2611919/1‑150 (MQ=255) gCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTg < 1:804855/150‑1 (MQ=255) gCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCAAAGATTGCTGGGGCCGCTTAGCGGCCCAATCGCGACACAAGGCCGCTTCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGAGCTGCatgatg > 2:711665/1‑150 (MQ=38) gTCGCGAACGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTggg < 1:4676270/150‑1 (MQ=255) gTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGTTTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTggg < 1:1601883/150‑1 (MQ=255) gTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTggg > 1:4127532/1‑150 (MQ=255) gTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTggg > 1:4127714/1‑150 (MQ=255) gTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTggg > 1:3750092/1‑150 (MQ=255) tCGCGCACGGGCCGCGCAGCGGCCCCAGGACCTCGGCATCTTGCACAGATTGCGGGGGCCGCTGTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACCCGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg < 1:1081389/150‑1 (MQ=37) tCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGTTTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg < 1:4992818/150‑1 (MQ=255) tCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg < 2:3132134/150‑1 (MQ=255) cgcgACAGGGCCGCGCAGCGCCCCCAGCACCTCGGCATCATGCAAAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACACGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTggggg < 1:2791562/150‑1 (MQ=38) gcgAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGt > 2:1632239/1‑150 (MQ=255) cgAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGtt > 1:4449943/1‑150 (MQ=255) cgAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGAGTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGtt < 2:1290170/150‑1 (MQ=255) gAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTg > 1:5201115/1‑150 (MQ=255) ctggggCCGCTGCGCGGCCCTAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGa > 1:2395019/4‑150 (MQ=38) tggggCCGCTGCGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGccc > 2:5425941/3‑66 (MQ=37) tggggCCGCTGCGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGccc < 1:5425941/64‑1 (MQ=37) tggggCCGCTGCGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGaa > 1:3017255/3‑150 (MQ=255) aaGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGaa < 2:3994997/150‑1 (MQ=255) ggCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGt < 1:5382248/150‑1 (MQ=255) ggCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGt < 2:5438155/150‑1 (MQ=255) gccgcgccgcGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTg < 1:1608046/150‑1 (MQ=255) gCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTg > 2:427133/1‑150 (MQ=255) gCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTg < 1:1608155/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa > 1:4071905/1‑150 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 1:5391739/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa > 1:1821159/1‑150 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa > 2:3383648/1‑150 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 1:2612403/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 2:3439359/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 2:3606818/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 2:4842777/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 2:3612016/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa > 1:3898490/1‑150 (MQ=255) gcgcAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAgg > 2:5025419/1‑150 (MQ=255) gcgcAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAgg < 1:2311048/150‑1 (MQ=255) gcgcAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAgg > 2:2569096/1‑150 (MQ=255) gcgcAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAgg > 2:845434/1‑150 (MQ=255) gcAGCGGCCCCAGGATCTCGGCATCATGCATAGATGGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGAt < 2:1187995/150‑1 (MQ=255) cAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGATc < 2:4077244/150‑1 (MQ=255) aGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCGTGCTGGGGGTTGAAGGTGAGGATCg > 1:811276/1‑150 (MQ=255) | ACGATAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCA‑CACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGATCG > NC_002947/3056551‑3056847 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |