| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,200,867 | A→T | 7.9% | intergenic (‑246/+31) | ethA ← / ← PP_2806 | FAD‑containing monooxygenase EthA/TetR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,200,867 | 0 | A | T | 7.9% | 385.4 / 19.2 | 128 | intergenic (‑246/+31) | ethA/PP_2806 | FAD‑containing monooxygenase EthA/TetR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (52/65); new base T (5/5); total (58/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.47e-01 | |||||||||||
Only 100 of 130 total aligned reads displayed.
CACCACGTCACTGCTATTTCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGATTGATCA > NC_002947/3200718‑3201016 | caccacGTCACTGCTATTTCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCa > 1:1029052/1‑150 (MQ=255) ccacGTCACTGCTATTTCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGc < 1:2127103/150‑1 (MQ=255) cacGTCACTGCTATTTCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCg > 1:2981728/1‑150 (MQ=255) tCACTGCTATTTCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACgc < 2:3848344/150‑1 (MQ=255) tGCTATTTCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACgcagca > 1:1669574/1‑150 (MQ=255) ttCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCTGCGTCGCTGCACGGCGa < 2:5407568/150‑1 (MQ=255) ttCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGa > 1:3336165/1‑150 (MQ=255) tCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGaa > 2:3840850/1‑150 (MQ=255) cAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATTCGCCGTGCTGCGTCGCTGCACGGCGat < 2:1652071/150‑2 (MQ=255) cAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAAt > 1:4837010/1‑150 (MQ=255) aGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGaaac > 1:238342/1‑148 (MQ=255) aGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATc > 2:1347668/1‑150 (MQ=255) gatgatTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCt > 2:3275508/1‑150 (MQ=255) gatgatTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCt > 1:2310715/1‑150 (MQ=255) gatgatTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCt > 2:2015077/1‑150 (MQ=255) gatTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCtgtg < 2:2616047/150‑1 (MQ=255) ctttGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGGTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTgg < 2:2455192/149‑1 (MQ=255) tttGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTggg > 1:39374/1‑150 (MQ=255) tttGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTggg < 2:1987989/150‑1 (MQ=255) tttGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTggg < 2:4818814/150‑1 (MQ=255) cTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAg > 2:4732419/1‑150 (MQ=255) cTGTTACTTCGCCGAACAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGACCGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAg < 1:3009179/150‑1 (MQ=255) tACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAAc < 2:2981728/150‑1 (MQ=255) cTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTg < 1:1347668/150‑1 (MQ=255) ccGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCCTCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGccac < 2:3511234/150‑1 (MQ=255) gATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCCTCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGccacca > 2:1418571/1‑150 (MQ=255) taccAGACTGACCCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACtt > 1:1185956/4‑150 (MQ=255) gATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACtt > 2:4654712/1‑150 (MQ=255) gATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACtt > 2:4654554/1‑150 (MQ=255) tCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGa < 2:1746714/150‑1 (MQ=255) aGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACt > 2:3714371/1‑150 (MQ=255) aGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACt < 2:608361/150‑1 (MQ=255) aGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACt < 2:608303/150‑1 (MQ=255) aCTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑CGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGc < 1:4851386/150‑1 (MQ=255) aCTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAAc > 2:4055877/1‑128 (MQ=255) aCTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAAc < 1:4055877/128‑1 (MQ=255) cTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGcc < 2:3336165/150‑1 (MQ=255) gggTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTg > 2:5284558/1‑150 (MQ=255) gTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCAGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGc > 1:1527954/1‑150 (MQ=255) tCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGcg < 2:60279/150‑1 (MQ=255) tGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGcggt > 2:4518743/1‑150 (MQ=255) tGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGcggt > 2:3832896/1‑150 (MQ=255) gTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTTACTGCCTGGCAGGcggtct > 1:2091466/1‑150 (MQ=255) tAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGcggtctc < 2:4635073/150‑1 (MQ=255) tAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGcggtctc < 1:1293490/150‑1 (MQ=255) aGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGcggtctcg < 2:1456101/150‑1 (MQ=255) aGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGcggtctcg < 1:3452005/150‑1 (MQ=255) aGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACAGGCCACCAGCAACTTGACAGCCTGGCAGGcggtctcg > 1:2666478/1‑150 (MQ=255) gATATCGTCATCGGAACGTCCGACGGGGGGGCGCGGCGGCTTTCAGCGCCGGAGGGGGCGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGcggtctcg < 2:2530445/150‑1 (MQ=255) tCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACGTGACTGCCTGGCAGGCGGTCTCGGTCTCGGc > 2:915467/1‑150 (MQ=255) cGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGTGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTcc < 2:5166455/150‑1 (MQ=255) ggAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGTGGGGA‑TCGCCGTGCAGCGACGCAGCACGGc > 1:2780562/1‑76 (MQ=255) ggAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGc < 2:2780728/76‑1 (MQ=255) ggAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGc > 1:2780728/1‑76 (MQ=255) gAACGTTCGA‑TGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAg < 2:4960053/150‑1 (MQ=255) ttCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTg < 1:679186/150‑1 (MQ=255) ttCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTg > 2:5305660/1‑150 (MQ=255) gA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCAc > 2:2317324/1‑150 (MQ=255) a‑aGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACg < 2:5240988/150‑1 (MQ=255) gggggCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTc < 1:3932839/150‑1 (MQ=255) cgcTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGt < 2:1946401/150‑1 (MQ=255) tGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAg < 2:351069/150‑1 (MQ=255) cTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGAc < 1:2789909/150‑1 (MQ=255) ttCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCa < 1:5284733/150‑1 (MQ=255) tCAGAGCCGGAGGGGGGGGGGA‑TCGCCGTGCAGCCACGCAGCACGGCGAAACCGGTGGGGCCAAAGTAAATGGCCACCAGCCACTTGACTGCCTGGCAGGCGGTCTCGGTATCGGCCGCCAGGCGTGCACGGTCGCCGTGAGCGGACCAg > 1:3493650/1‑150 (MQ=255) tCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAg < 1:3053596/150‑1 (MQ=255) agagCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCCACGCACCACCGCGAAAACCGTGGGGCCTAAGTAAAAGGCCACCAGCAACTTGACTGCCTGGCAGCCGGTCGAGGTAAAGGCCTCCAGGCGTGCACGGTCGCCGTTAGCGGACCCGGc > 1:5117190/1‑150 (MQ=255) gagCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCg < 1:2452828/150‑1 (MQ=255) gagCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCg > 2:2671036/1‑150 (MQ=255) gagCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCg > 1:772268/1‑150 (MQ=255) cgCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGa < 1:1500227/149‑1 (MQ=255) agCCGGAGGGGGCGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGa < 1:1857309/150‑1 (MQ=255) ccGGAGGGGGAGGGGA‑TCGCCGTGCGGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGc > 1:4751186/1‑150 (MQ=255) ccGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGGCTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGc < 1:1199894/150‑1 (MQ=255) gagggggaggggA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATc < 1:2317324/150‑1 (MQ=255) agggggaggggA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCa < 1:4197848/150‑1 (MQ=255) gggggaggggA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAg < 2:1185956/150‑1 (MQ=255) gggggaggggA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAg < 2:1029052/150‑1 (MQ=255) ggga‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCg < 2:2117494/150‑1 (MQ=255) ga‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGaa < 2:302192/150‑1 (MQ=255) ga‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGaa < 2:5117761/150‑1 (MQ=255) a‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGa > 2:1332635/1‑120 (MQ=255) a‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGa < 1:1332635/120‑1 (MQ=255) ttCGCCGTGCTGCGTCGCTGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAAc > 1:2514912/2‑150 (MQ=255) tCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACa < 1:2436670/150‑1 (MQ=255) cGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAg < 2:923062/150‑1 (MQ=255) gCCGTGCTGCGTCGCTGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGa > 1:4493938/1‑150 (MQ=255) gCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGa > 2:797528/1‑150 (MQ=255) ccGTGCTGCGTCGCTGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAg > 2:2393835/1‑125 (MQ=255) ccGTGCTGCGTCGCTGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAg < 1:2393835/125‑1 (MQ=255) ccGTGCTGCGTCGCTGCACGGCG‑ATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGcc < 2:107312/138‑1 (MQ=255) ccGTGCTGCGTCGCTGCACGGCG‑ATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGcc > 1:107312/1‑138 (MQ=255) ccGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCTCGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGAt < 1:62515/150‑1 (MQ=255) ccGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGAt > 1:2268345/1‑150 (MQ=255) ccGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGGGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGAt > 2:4737248/1‑150 (MQ=255) cGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGAtt < 1:3321906/150‑1 (MQ=255) gTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGATTg < 2:1669574/150‑1 (MQ=255) gTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGATTg > 1:2065448/1‑150 (MQ=255) gCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGATTGAt < 1:2356617/150‑1 (MQ=255) aGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGATTGATCa < 2:39374/150‑1 (MQ=255) | CACCACGTCACTGCTATTTCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGA‑AGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGA‑TCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGATTGATCA > NC_002947/3200718‑3201016 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |