| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,306,730 | C→T | 7.6% | intergenic (+18/+14) | cysS → / ← PP_2906 | cysteine‑‑tRNA ligase/sensor histidine kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,306,730 | 0 | C | T | 7.6% | 431.5 / 17.9 | 145 | intergenic (+18/+14) | cysS/PP_2906 | cysteine‑‑tRNA ligase/sensor histidine kinase |
| Reads supporting (aligned to +/- strand): ref base C (72/62); new base T (4/7); total (76/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 148 total aligned reads displayed.
TCCAGGCGCGCCTGAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCGACAACCCCAGCCCGAAGCCGGCA > NC_002947/3306582‑3306879 | tCCAGGCGCGCCTGAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCg > 1:1723610/1‑150 (MQ=255) cgcacgcgcCTTCAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCa > 2:4790745/5‑150 (MQ=255) cAGGCGCGCCTGAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCa > 1:1742182/1‑150 (MQ=255) aGGCGCGCCTGAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGCAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAg > 1:2185472/1‑150 (MQ=255) ggCGCGCCTGAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGc < 2:891846/150‑1 (MQ=255) gcgcCTGAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGcccc > 2:2902331/1‑150 (MQ=255) cgcCTGAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCGGTGCAGCCCCa < 2:877070/150‑1 (MQ=255) gcCTGAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAg > 1:3198773/1‑150 (MQ=255) ccTGAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCg < 2:5154460/140‑1 (MQ=255) ccTGAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGc < 2:650678/150‑1 (MQ=255) cTGAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCGGTGCAGCCCCAgtt < 1:4381853/150‑3 (MQ=255) cTGAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCt > 2:5028420/1‑150 (MQ=255) gAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAGCTGGGGCTGCGGTGCAGCCCCAgttac < 1:3972690/150‑5 (MQ=255) ggCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTAt < 1:673737/150‑1 (MQ=255) gcgcGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTAtt < 1:5028420/150‑1 (MQ=255) gcgTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTg < 1:929869/150‑1 (MQ=255) cgTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGc < 2:2690480/150‑1 (MQ=255) ggACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGa < 1:2236253/150‑1 (MQ=255) ggACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGa > 1:2437609/1‑150 (MQ=255) ggACAAGAACTGGGCTGAGTCTGACCGCAGTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGa < 1:2566231/150‑1 (MQ=255) gACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGAc > 2:3069744/1‑150 (MQ=255) cAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGAccc < 1:2502798/150‑1 (MQ=255) aaGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCg > 1:2758764/1‑150 (MQ=255) aaGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCg < 2:1547018/150‑1 (MQ=255) aaGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCg > 2:234262/1‑150 (MQ=255) tGGGCTGAGTCTGACCGCATGCGCGATCAGCTGACCGCCATGGGTGGAGTGCTGGAGGACAGCAAGGGCACGACTACCGGGCGTCTGGCTGACTGAAGGAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCg < 2:3244903/150‑1 (MQ=255) cTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCa < 1:5165204/150‑1 (MQ=255) tCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCa > 1:3806603/1‑150 (MQ=255) tCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGAGGGCAGTGCa > 2:1294422/1‑150 (MQ=255) tGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAAt > 1:4439473/1‑150 (MQ=255) aCCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATAc > 2:281318/1‑150 (MQ=255) cGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCa > 2:315161/1‑150 (MQ=255) gCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAg > 2:1507035/1‑150 (MQ=255) cATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGc < 2:4233820/150‑1 (MQ=255) tCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTg < 2:3375837/150‑1 (MQ=255) tCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTg > 2:3715840/1‑150 (MQ=255) gcgATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGc < 2:4583265/150‑1 (MQ=255) gcgATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGc < 2:5248329/150‑1 (MQ=255) cgATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGcc > 1:3080027/1‑150 (MQ=255) tCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCccca < 1:5373114/150‑1 (MQ=255) gCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTTACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCcccaccc < 1:1939476/150‑1 (MQ=255) gACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATa > 1:1828363/1‑130 (MQ=255) aCCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACt > 2:1504071/1‑150 (MQ=255) ccGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTc < 2:4319675/150‑1 (MQ=255) cGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCg < 1:4825332/150‑1 (MQ=255) cGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCg < 2:2794942/150‑1 (MQ=255) gCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGc < 1:411379/150‑1 (MQ=255) cATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCtt < 1:3744578/150‑1 (MQ=255) cATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCtt > 2:5264485/1‑150 (MQ=255) aTGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTc > 2:185113/1‑150 (MQ=255) ggTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTcccc < 2:1742182/150‑1 (MQ=255) aGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAAtc > 1:4182558/1‑150 (MQ=255) gCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCACAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTcc > 1:3573124/1‑150 (MQ=255) ggaggaCAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGc < 1:3472515/150‑1 (MQ=255) cAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCATTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGaaa < 1:3138108/150‑1 (MQ=255) aGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAAt < 2:4665382/101‑1 (MQ=255) aGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAAt > 1:4665382/1‑101 (MQ=255) aGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAAc > 1:2718930/1‑150 (MQ=255) gCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAAcc > 1:4135122/1‑150 (MQ=255) cAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCa > 2:4917349/1‑150 (MQ=255) gggCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGc < 1:1799559/150‑1 (MQ=255) ggCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCa > 1:3518365/1‑150 (MQ=255) gACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTcg > 2:2370461/1‑150 (MQ=255) gACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTcg > 2:5381140/1‑150 (MQ=255) gACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTcg > 2:5381181/1‑150 (MQ=255) ccTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGAt > 1:4010430/1‑150 (MQ=255) cTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGc < 1:3123041/58‑1 (MQ=255) cTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATc > 2:4030305/1‑150 (MQ=255) ggCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTc > 1:1270343/1‑105 (MQ=255) ggCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTc < 2:1270343/105‑1 (MQ=255) gCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATcgcc > 2:3172705/1‑150 (MQ=255) ggCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACg > 1:366914/1‑150 (MQ=255) tgactgaAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATc < 1:3434350/150‑1 (MQ=255) tgactgaAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATc < 1:1900905/150‑1 (MQ=255) tgactgaAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATc < 1:4917349/150‑1 (MQ=255) tgactgaAGTAACTGGGGCTGCACCGCAGCCCCAGCATTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATc < 2:3198773/150‑1 (MQ=255) gactgaAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCg < 2:1723610/150‑1 (MQ=255) actgaAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCGa > 2:2768656/1‑150 (MQ=255) tgaAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAAt > 2:3092376/1‑103 (MQ=255) tgaAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAAt < 1:3092376/103‑1 (MQ=255) tgaAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGAt < 2:2878385/145‑1 (MQ=255) tgaAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCGACa > 2:1206018/1‑150 (MQ=255) tgaAGTAACTGGGGCGGCACCGCAGCCCCAGCGTTTAGTTGCTTTGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCCCCCACCTCGCTTCCCCCAATCTCCGGCCCGAAACCCTGCAGGGCGACGCTCGCCGCCACGAGCGACa > 2:1726868/1‑150 (MQ=255) aGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCGACAAcc < 1:241680/150‑1 (MQ=255) gTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCGACAAccc < 1:4993452/150‑1 (MQ=255) agcTGGGGCTGCGGTGCAGCCCCAGTTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATc < 2:5425975/138‑1 (MQ=255) agcTGGGGCTGCGGTGCAGCCCCAGTTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATc > 1:5425975/3‑140 (MQ=255) agcTGGGGCTGCGGTGCAGCCCCAGTTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATc > 1:5425694/3‑140 (MQ=255) tGGGGCTGCGGTGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCGACAACCCCAGcc > 2:2652373/1‑150 (MQ=255) tGGGGCTGCGGTGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAAGCTCCAGCCCGAAACCATGCAGGTCGACGAGCGCCGCCCCGAGCGACAACCCCAGcc > 2:4432260/1‑150 (MQ=255) tGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATc < 1:4470449/137‑1 (MQ=255) ggggCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCGACAACCCCAGccc > 2:1106666/1‑150 (MQ=255) gggCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCGACAACCCCAGCCCg > 2:254413/1‑150 (MQ=255) gCTGCACCGCAGCCCCAGCTTTTCTTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGACACCATGCAGGTCGACGATCGCCGCCACGATCGACAACCCCCGCCCGaa < 2:2545860/150‑1 (MQ=255) gCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCGACAACCCCAGCCCGaa < 2:2545806/150‑1 (MQ=255) tGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGc < 1:1114761/107‑1 (MQ=255) tGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGc > 2:1114761/1‑107 (MQ=255) cACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCGACAACCCCAGCCCGAAGCCg > 1:1060018/1‑150 (MQ=255) ccGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCGACAACCCCAGCCCGAAGCCGGc < 2:2185472/150‑1 (MQ=255) cGCAGCCCCAGATTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCGACAACCCCAGCCCGAAGCCGGCa > 2:3756243/1‑150 (MQ=255) | TCCAGGCGCGCCTGAAGGCGCGTGCGGACAAGAACTGGGCTGAGTCTGACCGCATTCGCGATCAGCTGACCGCCATGGGTGTAGTGCTGGAGGACAGCAAGGGCACGACTACCTGGCGTCTGGCTGACTGAAGTAACTGGGGCTGCACCGCAGCCCCAGCTTTTATTTGCTTAGACCCGCAAGCGGGCAGTGCAATACCAGCCTGGCCCCACCCAACTCGCTTCCCCCAATCTCCAGCCCGAAACCATGCAGGTCGACGATCGCCGCCACGATCGACAACCCCAGCCCGAAGCCGGCA > NC_002947/3306582‑3306879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |