| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,341,143 | T→G | 11.3% | intergenic (‑180/+63) | PP_2935 ← / ← ybiT | membrane protein/ABC‑F family ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,341,143 | 0 | T | G | 11.3% | 287.3 / 2.1 | 117 | intergenic (‑180/+63) | PP_2935/ybiT | membrane protein/ABC‑F family ATPase |
| Reads supporting (aligned to +/- strand): ref base T (40/55); new base G (10/5); total (57/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.68e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 122 total aligned reads displayed.
GGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGA > NC_002947/3340994‑3341288 | ggTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCt < 2:4039050/150‑1 (MQ=255) gTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCtg < 1:2483267/150‑1 (MQ=255) tcagcggtacctacgatgactacctgcgtagccagggtgtgctgttctgatttatgggacggcctggccatctcggatggccgggcCTATTCGCGGGCTTGCCCGCTC‑‑CCAAGG‑CCCCACAAGAGTCCAATACCTGTGCTGTCCCTGTgg > 2:2523541‑M1/87‑150 (MQ=255) tCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCtgt < 1:1255097/150‑1 (MQ=255) tCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCATGCCCCCTCTCCCAAGG‑CCCCACAACCCTCCAAAAACAGTGCGGTCCCagt > 1:1226749/1‑150 (MQ=255) ccATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCAGTGCGGTCCCTGTgg > 2:692208/1‑150 (MQ=255) agcggtacctacgatgactacctgcgtagccagggtgtgctggtctgattgatgggacggcctggccatctcggatggccgggcCTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTgg > 1:3412089‑M1/85‑150 (MQ=255) agcggtacctacgatgactacctgcgtagccagggtgtgctggtctgattgatgggacggcctggccatctcggatggccgggcCTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTgg > 1:2253035‑M1/85‑150 (MQ=255) gcggtacctacgatgactacctgcgtagccagggtgtgctggtctgattgatgggacggcctggccatctcggatggccgggcCTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTggg > 1:1428658‑M1/84‑150 (MQ=255) gtcggCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCGTGCCCGCGCTCCCAAGG‑CCCCCCCAGCGGCCAAAACCGGTGCGGTCCCAGTGGGGGc > 2:1990872/4‑150 (MQ=255) catGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGc < 1:2688515/150‑1 (MQ=255) atGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCg < 1:5365662/150‑1 (MQ=255) tGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCgg < 1:333480/150‑1 (MQ=255) tGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCgg < 2:5274518/150‑1 (MQ=255) tGGCCGTGGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCgg < 2:3311799/150‑1 (MQ=255) ggCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCggg < 2:554388/150‑1 (MQ=255) cctacgatgactacctgcgtagccagggtgtgctggtctgattgatgggacggcctggccatctcggatggccgggcCTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCggg > 1:3917037‑M1/78‑150 (MQ=255) gCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGc < 1:4256528/150‑1 (MQ=255) ccGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGcc > 2:4463777/1‑149 (MQ=255) cGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCaa < 1:1428126/150‑1 (MQ=255) gTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCATTACCGCGCTCCCAAGG‑CCCCACAATCGTACAATAAAATTTCGGTCCCAGTGGGTGCGGGCAAg > 1:4249982/1‑150 (MQ=255) gatgactacctgcgtagccagggtgtgctggtctgattgatgggacggcctggccatctcggctggccgggcCTCTTCGCGGGCTTGCCCGCTCCCACAGGGGCCCCACAAGCGTCCAAGACCTGTGCGGTCCCTGTGGGAGCGGGCAAg > 2:1521728‑M1/73‑150 (MQ=255) gcgcGAAGGAAAAGACAGCAGGCTAACGAATTAGTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGccc < 2:4787635/150‑1 (MQ=255) gAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCCTCCAAAACCAGTGCGGTCCCAGTGGGAGCGGGCAAGCCCGCGa > 2:3398711/1‑150 (MQ=255) ggAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAaga < 1:1226612/150‑1 (MQ=255) ggAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAaga < 1:1226632/150‑1 (MQ=255) gAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACACGCGTCCAATACCTGTGCGGTCCCGGTGGGAGCGGGCCAGCCCGCGAagag > 2:3693854/1‑150 (MQ=255) aaaGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTTCCCGCTCAACCAAGG‑CCCCACAAGCGTCCAATAACAGTGCGGTCCCGGTGGGAGCGGGCAAGCCCCCGAAGAGGc > 2:613627/1‑150 (MQ=255) aGACAGCAGGCTAACTAATTATTCGTCGGGCCGTGCGGGTGGGTGGGATGGGGATTTACTCTTCGCGGGCTTGCCCGCTCTCCCATGG‑CCCCAAAAGCGTCAAATACCTGTGCGGTCCCTGTGGGAGCGGGAAAGCCCGCTAAGAGGccc < 2:3699181/150‑1 (MQ=255) gACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGTTGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCATGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGTGCGGGCAAGCCCGCGAAGAGGCCCg < 2:3954663/150‑1 (MQ=255) agcagGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGcc > 2:3545655/1‑150 (MQ=255) agcagGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATAACTGTGCGGTCCCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGcc > 2:418388/1‑150 (MQ=255) agcagGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCGTGGCCCCAAAAACAACG‑CCCCACAAACCTTCCAAAACAATGACGTCCCGGTCGGTGCGGGCGACCCCCCCAAAAGGCCCGGcc > 1:1400408/1‑150 (MQ=255) agGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCATGCCCGCACTCCCAAGG‑CCCCACAAGCGTCCAATACCAGTGCGGTACCTGTGGGAGCGGGCAAGCCCCCGAAGAGGCCCCGCCaac > 2:1295708/1‑148 (MQ=39) gCTAACGAATTATTCGTCGGGCCGTGCGGGTCGGTGGGATGGGGATGTCCTCTTCGCGGGCTGGCCCGCTCTCCCACGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCACGCCCGCGAAGAGGCCCGGCCATCCg < 2:3709239/150‑1 (MQ=255) gCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATAACTGTGCGGTCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCg > 2:1596324/1‑150 (MQ=255) tAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGACTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCgag > 2:947952/1‑150 (MQ=255) aCGAATTATTCGTCGGGCAGGGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGAt < 2:315312/150‑1 (MQ=255) gAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCGCTCCCAAGG‑CCCCACAAGCGTCCAATACCAGTGCGGTCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCCACCGAGATgg > 2:1368193/1‑150 (MQ=255) ttattCGGCGGGCCGTGCCGGTCGGTGGGTTGGGGTTGTACTCTTCGGGGGCTTGCCCGCTCTCCCAAGG‑CCCCACACGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCa < 1:5401020/150‑1 (MQ=39) ttCGTGGGGCCGTGCCGGTCGGTGGTATGGGGATTTCCTCTTCGGGGGCTTGCCCGCTCTCCCACGG‑CCCCACAAGCGTCCACTACCTGTGGGGTCCCTGTGGGCGGGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGc < 1:418388/150‑1 (MQ=255) ttCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCTGGCCATCTCGGATGGCCGGGc < 1:4888161/150‑1 (MQ=39) tggtcgGGCGGTGCGGGTGGGTGGGATGGGGATGTACTCTGCGGGGGCTGGCCCGCTCTCCCACGG‑CCCCACACGCGTCCAATCCCTGTGCGGTCCCGGGGGGAGCGGGCACGCCCGCGAAGAGGCCCGGCCATCTCGGATGGCCGGGcc < 1:5285429/148‑1 (MQ=255) tcgGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCGCTCCCAAGG‑CCCCACAACCGTCCAAAAACAGTGCGGTCCCGGTGGGGGCGGGCCAGCCCGCGAAGAGGCCCGGCCAACCCAGATGGCCCGGCCGTc > 1:2603483/1‑150 (MQ=255) ggCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCa < 2:3065900/150‑1 (MQ=255) tgTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACCAGCGTCCAATACCAGTGCGGTCCCGGGGGGCGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGGTGGCCCGGCCGGCCCatca > 2:322969/2‑150 (MQ=255) gCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTGCCGGTGGGAGCGGGCCAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCaacaatc > 1:1718894/1‑150 (MQ=255) ccGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGGGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCatcaatca < 2:598467/150‑1 (MQ=255) cggtGGGATGGCGATCTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGAGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCa < 2:5338571/150‑1 (MQ=255) cggtGGGAGGGGGATGTACTCGTCGCGGGCTTGCCCGCGCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCa < 2:3944264/150‑1 (MQ=255) ggagggggaggTACTCTTCGCGGGCTTGCCCCCACACCCACGG‑CCCCACACGGGACCCACCCCTGGGCGGTCCGTGTGGGCGGGGCCACCCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGccca < 1:322969/150‑1 (MQ=255) tggggatgTACTCTTCGCGGGCTTGCCCCCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGGCCCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCCACCCAGATGGCCCGGCCGTCCCCTCAATCCGACCCCCACAccc > 2:4184698/1‑150 (MQ=255) ggttgTACTCTGCGGGGGCTTGCCCGATCACCCAAGC‑CCCCAAAAGCTTCAAATACCTGTGGGGTCCCTGGGGGTGGGGCCACCCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTgg < 1:2495297/147‑1 (MQ=255) gTACTCTTCGCGGGCTGGCCCGCCCCCCCCCGG‑CCCCACAAGCGGCCAATCCCTGGGGGGTCCCTGGGGGCGCGGGCACGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTAc < 1:45775/150‑1 (MQ=255) aCTCTTCGCGGGCGTGCCCGCGCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCCGGGGGTGCGGGCCAGCCCGCGCAGAGGCCCCGCCATCCGCGATGGCCCGGCCGTCCCATCAAACAGACCCGCACACCCAGGCTACGc > 2:1676990/1‑150 (MQ=255) gagaGCGGGCAAGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATcc < 1:350348‑M1/94‑1 (MQ=255) gagaGCGGGCAAGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATcc > 2:350348‑M1/5‑98 (MQ=255) TTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCCGCCATCCGAGATGGCCAGGCCCTCCCAACAATCAGACCAGCACACCCTGGCTCcgcacgt < 2:2910431‑M1/150‑4 (MQ=255) TCGCGGGCTTGCCCGCTCTCCCACGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTa > 2:4596597‑M1/1‑150 (MQ=255) GCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATc < 1:3021423‑M1/150‑1 (MQ=255) CTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCg < 1:3742512‑M1/150‑1 (MQ=255) TTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATcgg < 2:4208426‑M1/150‑2 (MQ=255) TTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGt < 1:2864367‑M1/150‑1 (MQ=255) TTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGt < 1:3011002‑M1/150‑1 (MQ=255) TTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGt < 1:4353001‑M1/150‑1 (MQ=255) TTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGt < 1:1882411‑M1/150‑1 (MQ=255) TGCCCGCTCTCCCACGG‑CCCCACACGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTa > 1:4463777‑M1/1‑150 (MQ=255) TGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTa < 1:2367489‑M1/150‑1 (MQ=255) CCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCCTCAATCAGACCAGCACACCCTGGCTCCGCAGGTAGTCATCGTAGGt < 2:4146740‑M1/150‑1 (MQ=255) CCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCg < 1:4216530‑M1/145‑1 (MQ=255) CCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCg > 2:4216530‑M1/1‑145 (MQ=255) GCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTAc < 1:3149100‑M1/150‑1 (MQ=255) tcCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCt > 2:4879088/1‑150 (MQ=255) cAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGTGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGaa > 2:1574721/1‑150 (MQ=255) cAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGaa > 1:4831122/1‑150 (MQ=255) aaGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAg > 1:3512004/1‑150 (MQ=255) aGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGt > 2:830054/1‑150 (MQ=255) cccACACGCGTCCAATACCTGTGCGGGCCCTGTGGGAGGGGGCACCCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTccac < 1:4260306/150‑1 (MQ=255) cccACAAGCGTCCAATACCTGTGCGTTCCCTGTGGGTGCGGGCAAGCCCGCGAAGAGGCCCGTCCATCCGTGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTTCGGAGGTAGTCATCGTAGGTACCGCTGAAGTccac < 2:2539649/150‑1 (MQ=255) cccACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTccac > 1:3434097/1‑150 (MQ=255) cccACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTccac > 1:4802614/1‑150 (MQ=255) ccACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTccacc > 2:2275544/1‑150 (MQ=255) gCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCcaccacacca > 2:1747408/1‑150 (MQ=255) gTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATc < 2:3149100/150‑1 (MQ=255) tCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCg > 1:4944365/1‑150 (MQ=255) cAATACCTGTGCGGACCCTGGGGGCGCGGGCACGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGc < 1:2910431/150‑1 (MQ=255) aaTACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGcc > 1:3739229/1‑150 (MQ=255) aaTACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGcc > 1:4409942/1‑150 (MQ=255) ccgggggCGGCCCCGGTGGGCGCGGGCACGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGAc < 1:1990872/144‑1 (MQ=255) aCCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGAc < 2:4586965/150‑1 (MQ=255) ccTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACa < 2:5124999/150‑1 (MQ=255) tgtgCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGc > 2:228610/1‑150 (MQ=255) gtgCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCt > 2:2066007/1‑150 (MQ=255) ggTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCgat < 1:2029992/150‑1 (MQ=255) tCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCgatga > 2:1907296/1‑150 (MQ=255) tCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCgatga > 1:161345/1‑150 (MQ=255) ccTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGcc < 2:4859054/135‑1 (MQ=255) ccTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGcc < 2:4859330/135‑1 (MQ=255) ccTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGcc > 1:4859054/1‑135 (MQ=255) ccTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGcc > 1:4859330/1‑135 (MQ=255) | GGTCCCATCATGGCCGTTGCGCGAAGGAAAAGACAGCAGGCTAACGAATTATTCGTCGGGCCGTGCCGGTCGGTGGGATGGGGATGTACTCTTCGCGGGCTTGCCCGCTCTCCCAAGG‑CCCCACAAGCGTCCAATACCTGTGCGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGA > NC_002947/3340994‑3341288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |