Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,424,777 A→G 5.3% T324A (ACC→GCC)  PP_3038 → TraC domain‑containing protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,424,7770AG 5.3% 539.2 / 10.6 170T324A (ACC→GCC) PP_3038TraC domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base A (76/83);  new base G (4/5);  total (81/89)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 173 total aligned reads displayed.

ATGCTGCGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATGCGCCTTCGT  >  NC_002947/3424628‑3424926
                                                                                                                                                     |                                                                                                                                                     
  gctgcGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTAcc                                                                                                                                                     >  1:4533266/1‑150 (MQ=255)
    tgcGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCgg                                                                                                                                                   <  1:2586661/150‑1 (MQ=255)
      cGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTg                                                                                                                                                 <  2:899143/150‑1 (MQ=255)
       ggtggtTATGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGGGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCGTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTgg                                                                                                                                                >  2:446041/1‑150 (MQ=255)
         tggtTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGTAGCCGGTGGCt                                                                                                                                              <  1:1800467/150‑1 (MQ=255)
          ggtTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGTGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGTAGCCGGTGGCtt                                                                                                                                             <  1:1243104/150‑2 (MQ=255)
          ggtTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGTGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGTAGCCGGTGGCtt                                                                                                                                             <  1:3665915/150‑2 (MQ=255)
           gtTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTgg                                                                                                                                            <  2:4717967/150‑1 (MQ=255)
             tgtgGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGTAGCCGGTGGCTTGat                                                                                                                                          <  1:2989097/150‑2 (MQ=255)
             tgtgGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGaa                                                                                                                                          <  2:504026/150‑1 (MQ=255)
               tgggtggCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAgg                                                                                                                                        <  2:4421570/150‑1 (MQ=255)
                gggtggCCAGGGAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGa                                                                                                                                       <  2:224459/150‑1 (MQ=255)
                    ggCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATg                                                                                                                                   <  1:1340899/150‑1 (MQ=255)
                     gCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGc                                                                                                                                  <  2:3681438/150‑1 (MQ=255)
                       cAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTg                                                                                                                                <  2:4354930/150‑1 (MQ=255)
                       cAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTg                                                                                                                                >  2:4855636/1‑150 (MQ=255)
                        aGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTgg                                                                                                                               <  1:5052988/150‑1 (MQ=255)
                        aGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTgg                                                                                                                               >  1:3198256/1‑150 (MQ=255)
                           tAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCa                                                                                                                            <  1:1288149/150‑1 (MQ=255)
                           tAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCAGCATTGCGCTGAAGGCCTTGTGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACACGCTGGcga                                                                                                                            <  2:2749148/150‑3 (MQ=255)
                            aGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAg                                                                                                                           <  1:4423640/150‑1 (MQ=255)
                                 gCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTg                                                                                                                      >  1:286808/1‑150 (MQ=255)
                                   ccGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTgag                                                                                                                    >  1:197170/1‑150 (MQ=255)
                                    cGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGGCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTgaga                                                                                                                   <  2:2183639/150‑1 (MQ=255)
                                    cGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTgaga                                                                                                                   <  2:4918526/150‑1 (MQ=255)
                                     gATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGagag                                                                                                                  >  1:4959038/1‑150 (MQ=255)
                                      aTCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAgt                                                                                                                 >  2:3412838/1‑150 (MQ=255)
                                          tctcGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAgtggtg                                                                                                             >  1:3440146/1‑150 (MQ=255)
                                                cTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGa                                                                                                       <  1:4829217/150‑1 (MQ=255)
                                                    gCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGc                                                                                                   <  2:2838628/150‑1 (MQ=255)
                                                    gCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGCCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGAACGc                                                                                                   >  1:469202/1‑150 (MQ=255)
                                                       tGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTCCCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCa                                                                                                >  1:2125795/1‑150 (MQ=255)
                                                           gTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATg                                                                                            >  1:3245260/1‑150 (MQ=255)
                                                           gTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATg                                                                                            <  2:3589942/150‑1 (MQ=255)
                                                            ttAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGc                                                                                           >  1:2778528/1‑150 (MQ=255)
                                                                  ggACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACg                                                                                     >  2:2526298/1‑150 (MQ=255)
                                                                   gACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGt                                                                                    >  1:1570463/1‑150 (MQ=255)
                                                                    aCCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTc                                                                                   <  1:2352796/150‑1 (MQ=255)
                                                                       gACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCata                                                                                              >  1:1441769/1‑136 (MQ=255)
                                                                             aaCGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATc                                                                          >  2:3945038/1‑150 (MQ=255)
                                                                               cGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCt                                                                        <  2:4961158/150‑1 (MQ=255)
                                                                               cGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCt                                                                        <  2:1929010/150‑1 (MQ=255)
                                                                                  ccTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCatat                                                                                             <  1:383370/126‑1 (MQ=255)
                                                                                   cTGCATTGCGCTGAACGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATAAGCAGAACGTCGAACTGATCCTGccc                                                                    <  2:1212296/150‑1 (MQ=255)
                                                                                     gCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCaa                                                                  >  2:710191/1‑150 (MQ=255)
                                                                                     gCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCaa                                                                  >  1:2667118/1‑150 (MQ=255)
                                                                                     gCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCaa                                                                  <  2:5281893/150‑1 (MQ=255)
                                                                                      cATTGCGCTGAAGGCCTTGAGTCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTTCCGGTGGCTGGAAGGACATGCTGTCCAGGACTGATAGTGGTGCCGTGATCGCCCATATGCATATATTCGAACTGATCATTGCCAat                                                                 <  2:2936092/150‑1 (MQ=255)
                                                                                           cgcTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAAtgatga                                                            >  2:4460829/1‑150 (MQ=255)
                                                                                            gcTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAg                                                           >  2:5199006/1‑150 (MQ=255)
                                                                                              tGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCCGGACTGAGAGTGGTGCCCTGAGCGCCCAGATGCAGAACGTCGAACTGGTCCTGGCCCATGATGTgcg                                                         >  2:4933966/1‑150 (MQ=255)
                                                                                              tGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAgcg                                                         >  2:2591060/1‑150 (MQ=255)
                                                                                              tGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAgcg                                                         >  2:2501605/1‑150 (MQ=255)
                                                                                                aaGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCt                                                       <  2:166684/150‑1 (MQ=255)
                                                                                                 aGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTg                                                      <  1:2938506/150‑1 (MQ=255)
                                                                                                 aGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTg                                                      <  2:1707154/150‑1 (MQ=255)
                                                                                                  ggCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTgg                                                     >  2:4576268/1‑150 (MQ=255)
                                                                                                  ggCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTgg                                                     >  2:3672971/1‑150 (MQ=255)
                                                                                                   gCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGa                                                    <  2:5319021/150‑1 (MQ=255)
                                                                                                     cTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGc                                                  >  1:3933873/1‑150 (MQ=255)
                                                                                                     cTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGc                                                  >  1:1822602/1‑150 (MQ=255)
                                                                                                      ttGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCg                                                 <  1:4878862/150‑1 (MQ=255)
                                                                                                       tGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCgg                                                <  2:3810416/150‑1 (MQ=255)
                                                                                                        gAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCggg                                               <  2:4258876/150‑1 (MQ=255)
                                                                                                         aGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCgggg                                              <  1:4496980/150‑1 (MQ=255)
                                                                                                         aGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCgggg                                              <  1:4496845/150‑1 (MQ=255)
                                                                                                          ggCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGt                                             <  2:853215/150‑1 (MQ=255)
                                                                                                             cGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTc                                                                                   >  2:3155377/1‑109 (MQ=255)
                                                                                                             cGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGAt                                          >  1:1435118/1‑150 (MQ=255)
                                                                                                             cGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGAt                                          <  2:136208/150‑1 (MQ=255)
                                                                                                              gTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATc                                         <  1:2501605/150‑1 (MQ=255)
                                                                                                              gTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATc                                         <  1:5030061/150‑1 (MQ=255)
                                                                                                              gTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATc                                         <  1:2060987/150‑1 (MQ=255)
                                                                                                              gTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATc                                         >  1:1919625/1‑150 (MQ=255)
                                                                                                                    cGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTAc                                   >  2:2069002/1‑150 (MQ=255)
                                                                                                                     ggCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGTGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACa                                  >  2:2778735/1‑150 (MQ=255)
                                                                                                                       cAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGACCGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAAc                                <  2:2963420/150‑1 (MQ=255)
                                                                                                                       cAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAAc                                <  1:2785940/150‑1 (MQ=255)
                                                                                                                         aGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGc                              <  2:825476/150‑1 (MQ=255)
                                                                                                                           tCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCt                            >  2:1768651/1‑150 (MQ=255)
                                                                                                                             aCGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTc                          >  1:5195367/1‑150 (MQ=255)
                                                                                                                              ctgCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCa                         <  1:5105154/148‑1 (MQ=255)
                                                                                                                               ggCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAg                        >  2:11213/1‑150 (MQ=255)
                                                                                                                                    tGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCa                   <  1:3047676/150‑1 (MQ=255)
                                                                                                                                     gATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCaa                  <  2:638002/150‑1 (MQ=255)
                                                                                                                                       tccaGCCACCGGTAGCCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACCGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGa                >  2:5204500/4‑150 (MQ=255)
                                                                                                                                       tCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGa                >  2:1298339/1‑150 (MQ=255)
                                                                                                                                        cAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGAt               >  1:2512284/1‑150 (MQ=255)
                                                                                                                                        cAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCAGATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGAt               >  1:5239016/1‑150 (MQ=255)
                                                                                                                                         aaGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCaa                                                                  >  1:987606/1‑98 (MQ=255)
                                                                                                                                         aaGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATc              <  2:1459849/150‑1 (MQ=255)
                                                                                                                                          aGCCACCGGTAGCCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCa             >  2:1844861/1‑150 (MQ=255)
                                                                                                                                          aGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCa             >  1:5236972/1‑150 (MQ=255)
                                                                                                                                            ccACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATg           >  1:447172/1‑150 (MQ=255)
                                                                                                                                             cACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATgc          <  1:674290/150‑1 (MQ=255)
                                                                                                                                              aCCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTc                                                                                   <  2:4514212/76‑1 (MQ=255)
                                                                                                                                              aCCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATgcg         >  2:32356/1‑150 (MQ=255)
                                                                                                                                                    tACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATGCGCCTTCg   >  1:4188392/1‑150 (MQ=255)
                                                                                                                                                    tACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATGCGCCTTCg   >  1:1656577/1‑150 (MQ=255)
                                                                                                                                                     aCCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATGCGCCTTCGt  <  1:950950/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ATGCTGCGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATGCGCCTTCGT  >  NC_002947/3424628‑3424926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: