| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,543,691 | T→C | 9.8% | intergenic (+32/+31) | PP_3128 → / ← galE | exopolysaccharide biosynthesis/transport protein/UDP‑glucose 4‑epimerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,543,691 | 0 | T | C | 9.8% | 412.6 / 25.3 | 143 | intergenic (+32/+31) | PP_3128/galE | exopolysaccharide biosynthesis/transport protein/UDP‑glucose 4‑epimerase |
| Reads supporting (aligned to +/- strand): ref base T (75/54); new base C (7/7); total (82/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.45e-01 | |||||||||||
Only 100 of 146 total aligned reads displayed.
GCCAACGGAATGAACAACAAGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCAC > NC_002947/3543543‑3543838 | gCCAACGGAATGAACAACAAGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCtt < 2:92354/150‑1 (MQ=255)gCCAACGGAATGAACAACAAGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCtt > 1:954632/1‑150 (MQ=255)gCCAACGGAATGAACAACAAGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCtt < 1:1621286/150‑1 (MQ=255) cAACGGAATGAACAACAAGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTtgt < 2:4130290/150‑1 (MQ=255) cAACGGAATGAACAACAAGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTtgt > 1:2979245/1‑150 (MQ=255) aCGGAATGAACAACAAGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTtgt > 2:2697426/1‑148 (MQ=255) aaTGAACAACAAGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTgcg > 2:5107799/1‑150 (MQ=255) aTGAACAACAAGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTgcgc < 2:5269376/150‑1 (MQ=255) tGAACAACAAGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGcc < 2:902042/150‑1 (MQ=255) tGAACAACAAGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGcc > 2:129300/1‑150 (MQ=255) aacaaGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGaaa < 1:1955027/150‑1 (MQ=255) aacaaGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGaaa > 2:1359624/1‑150 (MQ=255) aacaaGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGaaa < 2:2577420/150‑1 (MQ=255) caaGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGc > 1:1525504/1‑150 (MQ=255) caaGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGc < 2:3578971/150‑1 (MQ=255) aagaagGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCt > 1:4824432/1‑150 (MQ=255) agGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTTAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGa < 2:3025862/150‑1 (MQ=255) ggAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAg > 1:1620680/1‑150 (MQ=255) aaaTCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCGTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGc < 2:4714671/150‑1 (MQ=255) aaTCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGcc > 1:5117671/1‑150 (MQ=255) aaTCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGcc < 2:4896793/150‑1 (MQ=255) gAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACt > 1:1510601/1‑150 (MQ=255) cTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTTCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTc < 1:3480169/150‑1 (MQ=255) cTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTc > 1:2331412/1‑150 (MQ=255) cTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTc < 1:3480348/150‑1 (MQ=255) tGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCACAAGGCTGCGCCTGaaa > 1:622164/1‑125 (MQ=39) tGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCACAAGGCTGCGCCTGaaa < 2:622164/125‑1 (MQ=39) aTCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCACAAGGCTGCGCCTGa > 2:3877500/1‑120 (MQ=39) aTCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCACAAGGCTGCGCCTGa < 1:3877500/120‑1 (MQ=39) aCCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGAt > 2:1898746/1‑150 (MQ=255) aCCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGAt > 2:2627350/1‑150 (MQ=255) cTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATAc > 1:2658482/1‑150 (MQ=255) tGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACt < 2:2449963/150‑1 (MQ=255) gggTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAgc > 2:4240825/1‑134 (MQ=255) ggTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGc < 2:5186624/150‑1 (MQ=255) gTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCa < 2:1206114/150‑1 (MQ=255) tACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCACAAGGCTGCGCCTGaaa > 1:3890845/1‑112 (MQ=38) tACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCACAAGGCTGCGCCTGaaa < 2:3890845/112‑1 (MQ=38) ggTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTc > 2:3630086/1‑150 (MQ=255) gTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTcc > 1:1661/1‑150 (MQ=255) gTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTcc > 1:182286/1‑150 (MQ=255) aaCCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCAc < 2:2253903/150‑1 (MQ=255) aCCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACt < 1:3216314/150‑1 (MQ=255) ccTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTg > 1:3337365/1‑150 (MQ=255) gggACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTCCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCa > 1:4453848/1‑150 (MQ=255) ggACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCAt > 2:3602620/1‑150 (MQ=255) ttGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGcaca > 1:4238201/1‑150 (MQ=255) ttGAACAAGGCCGACGAACAGCCACGCACCGATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTGGTGCTGCGCCTGAAAGCTCTGAGGCCCACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGcaca > 2:1375586/1‑150 (MQ=255) gAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAAt > 2:4152039/1‑150 (MQ=255) gAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAAt > 2:865982/1‑150 (MQ=255) aCAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTgcgc > 2:2786889/1‑77 (MQ=255) aCAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTgcgc < 1:2786889/77‑1 (MQ=255) ggCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTc < 1:2376198/150‑1 (MQ=255) ggCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTc < 1:3294191/150‑1 (MQ=255) gCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCt > 1:3062805/1‑145 (MQ=255) ccGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCa < 1:446780/150‑1 (MQ=255) cgacgaACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAg > 1:1943790/1‑150 (MQ=255) gacgaACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGt > 1:4075726/1‑150 (MQ=255) gacgaACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGt > 1:258511/1‑150 (MQ=255) gacgaACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGt > 1:612740/1‑150 (MQ=255) gaACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACt > 2:2815747/1‑87 (MQ=255) gaACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACt < 1:2815747/87‑1 (MQ=255) aCAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGc > 1:3503128/1‑150 (MQ=255) ccACGCACCTATTCCTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAAt < 2:1766778/150‑1 (MQ=255) aCGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGc > 1:5132664/1‑150 (MQ=255) cGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCa < 1:3755976/150‑1 (MQ=255) cGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCa < 1:4001958/150‑1 (MQ=255) cACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAgg < 1:4658925/150‑1 (MQ=255) aCCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAggg < 1:3543705/150‑1 (MQ=255) cTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGgcg > 2:4840676/1‑150 (MQ=255) tATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGgcgc > 2:3445348/1‑150 (MQ=255) aTTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGcc > 2:4573050/1‑150 (MQ=255) cTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGccagcc > 1:2363706/1‑150 (MQ=255) tGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCAc < 2:5048416/96‑1 (MQ=255) tGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCAc > 1:5048416/1‑96 (MQ=255) gAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGccagccca < 1:5191583/150‑1 (MQ=255) gAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGccagccca < 2:542765/150‑1 (MQ=255) gCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGccagcccagc < 1:5107799/150‑1 (MQ=255) gCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGccagcccagc < 2:12590/150‑1 (MQ=255) ttCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCCACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCAcc > 2:2965560/1‑150 (MQ=255) ttCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCAcc > 2:1500479/1‑150 (MQ=255) ttCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCAcc > 2:2064121/1‑150 (MQ=255) ggCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCa > 2:3169877/1‑150 (MQ=255) tACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGcc < 2:4588273/150‑1 (MQ=255) tagCTTTCAGGCGCAGCACAAGGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTTCATGGCCt > 1:4538589/3‑150 (MQ=39) tttCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCt > 1:5028105/1‑150 (MQ=255) tttCAGGCGCAGCACAAGGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGccagcccagc > 2:4046780/1‑133 (MQ=39) tttCAGGCGCAGCACAAGGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGccagcccagc < 1:4046780/133‑1 (MQ=39) ggCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCAt > 2:1102586/1‑150 (MQ=255) gcgcAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCa < 1:909604/98‑1 (MQ=255) gcgcAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCTGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCagc > 2:4768398/1‑148 (MQ=255) gcgcAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATc < 2:954632/150‑1 (MQ=255) gcgcAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATc > 1:133030/1‑150 (MQ=255) gcgcAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATc > 1:3321982/1‑150 (MQ=255) cgcAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATcc < 2:258511/150‑1 (MQ=255) cgcAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATcc < 1:4608050/150‑1 (MQ=255) cgcAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATcc < 1:1359815/150‑1 (MQ=255) cgcAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATcc < 1:1359624/150‑1 (MQ=255) cAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGc < 2:4824432/150‑1 (MQ=255) ccTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGAGACTGCAACTCCCCCTGCCACGCATGCCGCACACTCTGCTCCAGTGAGGCGAAGGCAGGGCGCCAGCCCAGCACCTGCATGGCCGTGCTCGCATCCGccac > 1:4783986/1‑150 (MQ=255) | GCCAACGGAATGAACAACAAGAAGGAAATCGAGGATTGCCTGCATCACCTGGGTACGGTGAACCTGATCGGGACAGTGTTGAACAAGGCCGACGAACAGCCACGCACCTATTACTGAGCCTTCTGGCAATACGCTTTCAGGCGCAGCCTTGTGCTGCGCCTGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCAC > NC_002947/3543543‑3543838 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |