| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,682,702 | C→G | 5.9% | intergenic (+23/+21) | crtZ → / ← PP_3247 | beta‑carotene hydroxylase/bile acid/Na+ symporter family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,682,702 | 0 | C | G | 5.9% | 621.7 / 21.2 | 187 | intergenic (+23/+21) | crtZ/PP_3247 | beta‑carotene hydroxylase/bile acid/Na+ symporter family transporter |
| Reads supporting (aligned to +/- strand): ref base C (82/94); new base G (6/5); total (88/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 | |||||||||||
Only 100 of 190 total aligned reads displayed.
GCACCGCGCGCACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTCGCGTTGTT > NC_002947/3682553‑3682851 | gCACCGCGCGCACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCAc < 2:1399498/150‑1 (MQ=255) CGCGCGCACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGc < 2:878479‑M1/150‑1 (MQ=255) cgcgcACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCg < 2:487212/150‑1 (MQ=255) gcgcACCGCTTGCACCATGCGGTGTAGGGGCGCACGGGGAGAGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCgg < 2:3311134/150‑1 (MQ=255) gcgcACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCgg < 2:3311125/150‑1 (MQ=255) gcgcACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCgg < 2:4564898/150‑1 (MQ=255) gcgcACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCgg < 2:3078412/150‑1 (MQ=255) cACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCAGGTGCCGGGcg < 2:5150359/150‑2 (MQ=255) aCCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGACGCAGCAATTGCGCAGCAGGCGCAGCCCATCGTGACGCATCCCTGGCACGCCCGGCCCCTGCCGGGCag > 2:4115867/1‑149 (MQ=255) aCCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCATGCCCGGCAGGTGCCGGGcgt < 1:3331233/150‑3 (MQ=255) ccGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCAGGTGCCGGGcgtg < 1:947384/150‑4 (MQ=255) ccGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGACACGCCCGGCACCTGCCGGGCATc > 1:5040752/1‑150 (MQ=255) cGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCg > 1:1663777/1‑150 (MQ=255) cTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCggg < 2:1882494/150‑1 (MQ=255) ttGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGt > 1:5366324/1‑150 (MQ=255) ttGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGt < 1:2363324/150‑1 (MQ=255) cACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGaa < 1:221417/150‑1 (MQ=255) aTGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCa < 2:2699349/150‑1 (MQ=255) aTGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCa > 2:5331506/1‑150 (MQ=255) gCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGt < 1:3750074/150‑1 (MQ=255) tGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCAc > 2:1247096/1‑150 (MQ=255) gAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACg < 2:1548971/150‑1 (MQ=255) gAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACg > 1:1092810/1‑150 (MQ=255) gAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACg < 1:1845551/150‑1 (MQ=255) ggggCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGtt > 2:1840632/1‑150 (MQ=255) gcACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCAcc > 2:2456419/1‑150 (MQ=255) gcACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCAcc > 2:652397/1‑150 (MQ=255) cACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCAccc > 1:698589/1‑150 (MQ=255) aCGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCt > 2:2148475/1‑150 (MQ=255) ggGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCGTg > 1:4092224‑M2/3‑150 (MQ=255) gGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTgg < 1:1429369‑M2/149‑1 (MQ=255) ggAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTggg < 2:3679223/150‑1 (MQ=255) gAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGCAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGc < 2:4061034/150‑1 (MQ=255) cGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGtt > 2:1116992/1‑128 (MQ=255) cGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGtt < 1:1116992/128‑1 (MQ=255) cGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCa < 2:1944524/150‑1 (MQ=255) cGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTACCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCa < 2:1325149/150‑1 (MQ=255) gTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAgccgcc > 1:3465213/1‑150 (MQ=255) ttCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCca < 2:4455962/150‑1 (MQ=255) ggTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCTACATg > 1:2939506/1‑150 (MQ=255) ggTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATg > 2:128818/1‑150 (MQ=255) ggTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATg > 1:4244701/1‑150 (MQ=255) gTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGc < 1:1975230/150‑1 (MQ=255) ttctATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCcgc > 2:2312928/1‑150 (MQ=255) ttctATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCcgc > 2:2171708/1‑150 (MQ=255) ttctATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCcgc > 2:907514/1‑150 (MQ=255) tATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTgg > 1:9382/1‑126 (MQ=255) tATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGc > 1:1092068/1‑150 (MQ=255) tGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTc > 2:2034887/1‑150 (MQ=255) cgccgcTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTcaccca > 2:363207/1‑150 (MQ=255) gccgcTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTggg > 2:425767/1‑119 (MQ=255) gccgcTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTggg < 1:425767/119‑1 (MQ=255) cgcTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACccacca < 1:2875428/150‑1 (MQ=255) cgcTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACccacca < 1:1734221/150‑1 (MQ=255) aaGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGGTCACGGTTTCACCCTAGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCaa > 2:2991275/1‑150 (MQ=255) ttGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCgg < 1:50645/150‑1 (MQ=255) ttGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCgg < 2:4432831/150‑1 (MQ=255) aaGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTcacccac < 2:5210459/134‑1 (MQ=255) agcagcAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCcgc < 2:4642834/150‑1 (MQ=255) gcagcaATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCATCCAAACCCGGCcgcg > 2:5317078/1‑150 (MQ=255) gcagcaATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCcgcg < 1:4177758/150‑1 (MQ=255) agcaATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGt > 1:339938/1‑150 (MQ=255) agcaATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGt > 1:1847141/1‑150 (MQ=255) aaTTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTaaa < 2:992146/150‑1 (MQ=255) aaTTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTaaa < 2:339938/150‑1 (MQ=255) aTTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAg < 1:1049917/150‑1 (MQ=255) tGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGaa < 1:1771057/150‑1 (MQ=255) tGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGaa < 1:749031/150‑1 (MQ=255) gcagcaGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACAt > 1:402573/1‑150 (MQ=255) agcagGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGa < 2:3145052/150‑1 (MQ=255) agcagGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGa > 1:266146/1‑150 (MQ=255) gcagGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCaaa < 2:938619/126‑1 (MQ=255) gcagGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCaaa > 1:939024/1‑126 (MQ=255) cagGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATc > 1:1068913/1‑150 (MQ=255) gcgcAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAg < 1:2486691/150‑1 (MQ=255) gcgcAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAg > 1:5249050/1‑150 (MQ=255) aaTCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACaa > 1:402749/1‑150 (MQ=255) aTCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAAc < 1:363207/150‑1 (MQ=255) aTCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCAACGGGTGAAATCAGGTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCACACCCGGCCGCGGTACAGAACCTGATCAAGCTGTACAAc > 2:2865292/1‑150 (MQ=255) gTGACGCATCCCTGGCTCGCCCGGCACCTGCCGGGCATCTGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCa < 2:3946064/150‑1 (MQ=255) gTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCa < 2:837124/150‑1 (MQ=255) aCGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGcc < 1:2395562/150‑1 (MQ=255) aCGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGcc > 1:3289111/1‑150 (MQ=255) gCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCgg < 2:5107551/150‑1 (MQ=255) cccTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCAcc < 2:261295/150‑1 (MQ=255) acccgatgCCCGGCAGGTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGACTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGc > 1:5229813/8‑150 (MQ=255) tGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGAt < 2:4355585/122‑1 (MQ=255) tGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGcc > 2:5393005/1‑150 (MQ=255) cccgatgCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGcc > 1:91680/7‑150 (MQ=255) ccgatgCCCGGCAGGTGCCGGGCGTCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACg < 1:3257355/130‑1 (MQ=255) ccgatgCCCGGCAGGTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCa > 2:1837977/6‑150 (MQ=255) gCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCTGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCAt < 2:4271637/150‑1 (MQ=255) cgatgCCCGGCAGGTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCAt > 2:4353608/5‑150 (MQ=255) aCGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATgg > 1:635162/1‑150 (MQ=255) gCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTc < 1:5146757/150‑1 (MQ=255) gCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTc < 1:128818/150‑1 (MQ=255) ccGGCAGGTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTcgc < 1:4353608/150‑1 (MQ=255) ccGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTAc < 2:4765381/124‑1 (MQ=255) ccGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTAc > 1:4765270/1‑124 (MQ=255) ggCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTCGCgt < 2:1357039/150‑1 (MQ=255) | GCACCGCGCGCACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGGCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTCGCGTTGTT > NC_002947/3682553‑3682851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |