| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,879,115 | A→G | 6.5% | T80A (ACC→GCC) ‡ | PP_3425 → | RND family transporter MFP subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,879,115 | 0 | A | G | 6.5% | 431.1 / 12.7 | 139 | T80A (ACC→GCC) ‡ | PP_3425 | RND family transporter MFP subunit |
| Reads supporting (aligned to +/- strand): ref base A (69/61); new base G (4/5); total (73/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
Only 100 of 142 total aligned reads displayed.
TGCAGGCTCCCGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAGCGC > NC_002947/3878966‑3879264 | tGCAGGCTCCCGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCa < 2:2357458/150‑1 (MQ=255) tCCCGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGTCTTCACCGACgg > 1:102877/1‑150 (MQ=255) tCCCGCGGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGTCTTCACCGAAgg > 1:102961/1‑150 (MQ=255) ccGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGgcg > 1:3188925/1‑150 (MQ=255) tGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCGGTGAAGGCGacct < 1:749282/150‑2 (MQ=255) tGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCGGTGAAGGCGacct < 1:749560/150‑2 (MQ=255) gcgcCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCGGTGAAGGCGacctg < 2:4371824/150‑3 (MQ=255) cgcCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAgg < 2:173285/150‑1 (MQ=255) gcCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGt > 1:959516/1‑150 (MQ=255) ccGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTc < 2:2021711/150‑1 (MQ=255) tAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTTAAGAAAg < 2:4346392/150‑1 (MQ=255) tAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAg > 2:1658358/1‑150 (MQ=255) tAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAg < 2:2876057/150‑1 (MQ=255) tAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAg < 2:4208752/150‑1 (MQ=255) aaGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAgg > 2:4944246/1‑150 (MQ=255) aaGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAgg < 2:3040389/150‑1 (MQ=255) aaGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACctgctg > 2:885036/1‑150 (MQ=255) aaGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACctgctg > 2:4493815/1‑150 (MQ=255) aGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGt < 1:5404985/150‑1 (MQ=255) gATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGACGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCa > 2:4048000/1‑150 (MQ=255) aTCGAACAACCGATCACCGACTGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAg < 1:4962217/150‑1 (MQ=255) tCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGa < 1:4493815/150‑1 (MQ=255) cGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGAt < 2:2281707/150‑1 (MQ=255) cGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGAt < 1:2979144/150‑1 (MQ=255) gAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATc > 2:4501003/1‑150 (MQ=255) aacaacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCg > 1:1484573/1‑150 (MQ=255) ccacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGAc < 2:5222625/148‑1 (MQ=255) aacCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGAcc > 2:316142/1‑150 (MQ=255) acCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGAccc < 1:1365644/150‑1 (MQ=255) ccGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCcg > 2:2509759/1‑150 (MQ=255) tCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGcc > 2:3350615/1‑150 (MQ=255) cGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGtt > 2:5021599/1‑150 (MQ=255) gAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTc > 2:2042494/1‑150 (MQ=255) gAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTc > 2:2042455/1‑150 (MQ=255) aTGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCa < 1:4283187/150‑1 (MQ=255) aTGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCa < 2:3705182/150‑1 (MQ=255) aTGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCa < 1:2087097/150‑1 (MQ=255) tGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAg < 2:2643549/150‑1 (MQ=255) gACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCt > 1:2680765/1‑150 (MQ=255) gAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGaa > 1:4185822/1‑150 (MQ=255) gAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGaa < 2:784794/150‑1 (MQ=255) gTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGt > 1:2518852/1‑150 (MQ=255) gTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGt > 1:4897238/1‑150 (MQ=255) ttCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTc > 1:1277/1‑150 (MQ=255) aCCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTccgc < 2:4867567/150‑1 (MQ=255) cGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAg < 1:2477074/98‑1 (MQ=255) cGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAg > 2:2477074/1‑98 (MQ=255) ggacgccTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCcgccgc > 1:2293678/4‑150 (MQ=255) cgccTCGAGGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCTCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTc > 1:2094860/1‑150 (MQ=255) gccTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCg < 2:3188925/150‑1 (MQ=255) gccTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCg > 2:2215746/1‑150 (MQ=255) gccTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCg < 2:3188895/150‑1 (MQ=255) cTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGac > 2:5352375/1‑149 (MQ=255) tCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAg > 2:1178025/1‑150 (MQ=255) tCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAg > 2:3278552/1‑150 (MQ=255) tCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAg > 1:1662703/1‑150 (MQ=255) tCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAg < 1:1658358/150‑1 (MQ=255) tCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAg > 2:3819699/1‑150 (MQ=255) gCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCaa < 1:1055145/150‑1 (MQ=255) ccccGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAAc < 1:1871958/150‑1 (MQ=255) gAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCaa < 2:3823755/150‑1 (MQ=255) gAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCaa < 2:3823810/150‑1 (MQ=255) aaaCCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCAACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAAc < 1:5152457/150‑1 (MQ=255) ccGTCGACGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACagg < 2:199291/150‑1 (MQ=255) ccGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACagg < 1:1560712/150‑1 (MQ=255) ccGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACagg < 1:4610781/150‑1 (MQ=255) cGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACaggc > 2:1179984/1‑150 (MQ=255) cGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACaggc > 2:3789426/1‑150 (MQ=255) gAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACaggccaag > 1:2072228/1‑150 (MQ=255) gTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCaa > 1:4180270/1‑138 (MQ=255) tGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACaggccaaggcca < 1:2215746/150‑1 (MQ=255) cgcCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCTTACCAGGATGAATACCGCCGCATCGAAGCCCAACTCAAAAAGGCCAAGGCAAcc > 2:907203/1‑150 (MQ=255) ccGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGcc > 1:393706/1‑150 (MQ=255) cgGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATc < 1:503426/150‑1 (MQ=255) tctcCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCa < 1:591119/150‑1 (MQ=255) ccGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAgcg > 1:3538722/1‑150 (MQ=255) ccGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAgcg > 1:511036/1‑150 (MQ=255) gCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCa > 1:3233988/1‑150 (MQ=255) ccAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCaa > 1:566824/1‑150 (MQ=255) aTCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGaa < 1:2415866/150‑1 (MQ=255) ttgACCTGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAg > 1:517920/3‑150 (MQ=255) cGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGc < 1:5285766/150‑1 (MQ=255) ctgggcGCCTTCGGTGAAGGCGACCTGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCccgc > 2:213613/6‑150 (MQ=255) cAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCccgc > 1:3873417/1‑150 (MQ=255) tgggcGCCTTCGGTGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCaa > 2:472733/5‑107 (MQ=255) tgggcGCCTTCGGTGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCaa < 1:472733/103‑1 (MQ=255) gggcGCCTTCGGTGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAg < 1:2856648/77‑1 (MQ=38) gggcGCCTTCGGTGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAg > 2:2856648/4‑80 (MQ=38) gggcGCCTTCGGTGAAGGCGACCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCccgccg > 2:1382754/4‑150 (MQ=255) ggTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCAGCTGTTCCAGATCGACCCGCGCCAGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCTACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGAccgccg > 1:4800714/1‑150 (MQ=255) cGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTgg < 1:4310889/150‑1 (MQ=255) gCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGc > 2:3972333/1‑150 (MQ=255) gCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGc < 2:239583/150‑1 (MQ=255) cTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGa > 1:5001090/1‑150 (MQ=255) cTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGa > 1:1962375/1‑150 (MQ=255) ttCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAg > 1:3393037/1‑150 (MQ=255) ttCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAg > 2:3001306/1‑150 (MQ=255) ttCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAg < 1:1344506/150‑1 (MQ=255) aCCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAgcgc > 1:3687176/1‑150 (MQ=255) aCCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAgcgc > 1:2945190/1‑150 (MQ=255) | TGCAGGCTCCCGCTGCGCCGAAGGTAAGTGTGGCCAAGGTGATCGAACAACCGATCACCGAATGGGACGAGTTCACCGGCCGCCTCGAAGCCCCGGAAACCGTCGAAGTGCGCCCGCGGGTCTCCGGCCAGATCGACCAGGTCGCCTTCACCGAAGGCGCCCAGGTCAAGAAAGGCGACCTGCTGTTCCAGATCGACCCGCGCCCGTTCCAGGCTGAAGTCCGCCGCCTCGAAGCCCAACTGCAACAGGCCAAGGCCACCGCCATCCGCAGCGCCAACGAAGCCCGCCGTGGCGAGCGC > NC_002947/3878966‑3879264 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |