| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,885,537 | C→G | 7.7% | A197G (GCC→GGC) ‡ | PP_3428 → | TPR repeat‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,885,537 | 0 | C | G | 7.7% | 510.8 / 25.1 | 156 | A197G (GCC→GGC) ‡ | PP_3428 | TPR repeat‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (68/76); new base G (10/2); total (78/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.15e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
CGACGCCATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGT > NC_002947/3885388‑3885686 | cGACGCCATGGGCCTATATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGc < 1:1240820/150‑1 (MQ=255) aTCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGTTGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCag > 1:2447218/1‑150 (MQ=255) tCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCagc > 1:398274/1‑150 (MQ=255) ggCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCagcga < 2:5182183/150‑1 (MQ=255) gCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGGGCTGCagcggc < 1:4507696/150‑3 (MQ=255) ctctATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCagcgagcg > 2:985930/1‑150 (MQ=255) ctctATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCagcgagcg > 2:3727258/1‑150 (MQ=255) ctctATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCagcgagcg > 2:2077256/1‑150 (MQ=255) tctATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAgcgc > 1:2770945/1‑150 (MQ=255) tctATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAgcgc > 1:4478698/1‑150 (MQ=255) tctATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAgcgc > 2:4834187/1‑150 (MQ=255) ttCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTCCACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTcgcg < 1:3541504/150‑1 (MQ=255) tCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCgg < 1:319762/150‑1 (MQ=255) tCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCgg < 2:419533/150‑1 (MQ=255) cGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTG‑ACCGAGCGCtaccgtga < 2:958852/150‑8 (MQ=255) ggCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGtt < 2:2859735/150‑1 (MQ=255) gCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCAGTTg > 1:4622249/1‑150 (MQ=255) cccccTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCCGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGc < 1:476050/150‑1 (MQ=255) ccccTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGcc > 2:2527388/1‑150 (MQ=255) tGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCGCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCg < 1:2640989/150‑1 (MQ=255) gCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCgg < 1:61477/150‑1 (MQ=255) gCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCGGGGGCAAccgc < 2:548108/150‑3 (MQ=255) cccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCg > 1:1932545/1‑150 (MQ=255) ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGCAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGAGGTTGCCGGGGGCAACCGCGa < 2:1919211/150‑1 (MQ=255) ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTCCACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCGGGGGCAACCGCGa < 2:536904/150‑1 (MQ=255) ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCGGGGGCAACCGCGa < 2:537073/150‑1 (MQ=255) ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGAGGTTGCCGGGGGCAACCGCGa < 1:3402015/150‑1 (MQ=255) ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGAGGTTGCCGGGGGCAACCGCGa < 1:4834187/150‑1 (MQ=255) ggAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGAGGTTGCCGGGGGCAACCGCGagcg < 2:3208051/150‑4 (MQ=255) aGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCGGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGccc < 1:976545/150‑1 (MQ=255) aTACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGc < 1:841245/150‑1 (MQ=255) aTACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGc > 2:1661799/1‑150 (MQ=255) aTACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGc > 2:1661727/1‑150 (MQ=255) aTACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGc < 1:1613761/150‑1 (MQ=255) tACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCg > 1:5103640/1‑150 (MQ=255) tACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCg > 2:4023393/1‑150 (MQ=255) aCCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGa > 2:2272266/1‑150 (MQ=255) ccAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGAc > 1:3043747/1‑150 (MQ=255) ccAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGAc < 2:1050823/150‑1 (MQ=255) aGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTc > 1:2173254/1‑150 (MQ=255) gCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGcatcgag < 2:2497415/150‑7 (MQ=255) gCAAGCCCGGGAGCACCAGCCGCACGAGGCCGACGCCCCCGTGCACCGGGCGCGCCTGGACCTGCACGAAACCGACTCCACGCACGCCGCTGCAGCCCAGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGcatcgag < 2:5225018/150‑7 (MQ=255) aaGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAgg < 1:4773437/150‑1 (MQ=255) cTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCGCCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGc < 1:4000124/150‑1 (MQ=255) tGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCagcga < 2:4172646/98‑1 (MQ=255) tGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCagcga > 1:4172646/1‑98 (MQ=255) ggAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCt < 2:1026769/150‑1 (MQ=255) cAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTc > 1:273246/1‑150 (MQ=255) aGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAgc < 1:4110904/150‑1 (MQ=255) gCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAgcg > 1:651600/1‑150 (MQ=255) gATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGc > 1:1494034/1‑150 (MQ=255) gATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGc > 1:11133/1‑150 (MQ=255) gATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGc > 1:10959/1‑150 (MQ=255) ccGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTCCCCGCACGCCGCGGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGccacc < 2:268820/150‑1 (MQ=255) cGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGccacca < 1:4278342/150‑1 (MQ=255) gACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTcgcg > 2:2777961/1‑84 (MQ=255) gACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTcgcg < 1:2777961/84‑1 (MQ=255) aCGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCacg < 2:184088/150‑1 (MQ=255) cAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCacga < 2:702750/146‑1 (MQ=255) aCCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGcc > 1:1531526/1‑150 (MQ=255) aCCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCAGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGcc > 2:1461730/1‑150 (MQ=255) cTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAg < 1:3383890/150‑1 (MQ=255) cTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAg > 2:3827057/1‑150 (MQ=255) gcCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTgg < 1:3763718/150‑1 (MQ=255) ccTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTggg < 1:1478731/150‑1 (MQ=255) ccTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACACCTCCCGCCAGGTGCTggg < 1:1069461/150‑1 (MQ=255) ccTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGACAACCTCGATGCCCTGGCGACTCAGGTACGc > 1:3219627/1‑103 (MQ=255) ccTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGACAACCTCGATGCCCTGGCGACTCAGGTACGc < 2:3219627/103‑1 (MQ=255) gTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCaa > 2:3697344/1‑150 (MQ=255) gTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCCGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCaa > 1:293929/1‑150 (MQ=255) tACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCaaa < 2:2448563/150‑1 (MQ=255) aCCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAg > 2:1406897/1‑150 (MQ=255) cTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGcc > 1:2007528/1‑133 (MQ=255) cTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGcc < 2:2007528/133‑1 (MQ=255) cTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGcc > 1:1191538/1‑150 (MQ=255) tGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGccc > 1:4365433/1‑150 (MQ=255) tGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGccc > 2:946453/1‑150 (MQ=255) gCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCt < 2:1731128/150‑1 (MQ=255) aCGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTgg > 1:2533206/1‑150 (MQ=255) aCGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTgg < 1:1577207/150‑1 (MQ=255) aaaaCGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGTGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGgcgg < 2:398274/150‑2 (MQ=255) aaaaCGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGgcgc < 2:3043747/150‑1 (MQ=255) aaaCGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCt > 2:4837995/1‑150 (MQ=255) aCGACTCCACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGa < 1:818673/150‑1 (MQ=255) aCGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGa < 2:4621925/150‑1 (MQ=255) gACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGc < 1:1778759/150‑1 (MQ=255) acgcacgcCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGAc > 1:1223357/1‑150 (MQ=255) acgcacgcCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGAc > 1:3205614/1‑150 (MQ=255) gccgcTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGcc > 1:3160822/1‑150 (MQ=255) tcgcTGCAGGGCTGCAGCGGGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCt > 2:765493/2‑150 (MQ=255) tcgcTGCAGGGCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCt > 1:2146397/2‑150 (MQ=255) tcgcTGCAGGGCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCt > 1:2146383/2‑150 (MQ=255) cTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTc < 1:3827057/150‑1 (MQ=255) tGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCt < 1:3727258/150‑1 (MQ=255) tGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCt < 1:1621819/150‑1 (MQ=255) tGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCt < 2:3444600/150‑1 (MQ=255) tGCAGCCCTGCAGCGAGCGCACGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCAGAGCCCCGACTCGGCCTTTCt < 2:3444938/150‑1 (MQ=255) gCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTg < 1:4558040/150‑1 (MQ=255) cAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGc > 1:1011778/1‑150 (MQ=255) cccTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGt > 1:2824417/1‑150 (MQ=255) | CGACGCCATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGT > NC_002947/3885388‑3885686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |