| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,885,573 | T→G | 5.9% | L209R (CTC→CGC) | PP_3428 → | TPR repeat‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,885,573 | 0 | T | G | 5.9% | 556.5 / 18.4 | 169 | L209R (CTC→CGC) | PP_3428 | TPR repeat‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (80/77); new base G (2/8); total (84/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.94e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.23e-01 | |||||||||||
Only 100 of 170 total aligned reads displayed.
GCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTGGCTGAAGCGCCACGAACAGC > NC_002947/3885425‑3885722 | gCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTc < 2:1292160/150‑1 (MQ=255) cccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCg > 1:1932545/1‑150 (MQ=255) ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGCAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGAGGTTGCCGGGGGCAACCGCGa < 2:1919211/150‑1 (MQ=255) ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTCCACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCGGGGGCAACCGCGa < 2:536904/150‑1 (MQ=255) ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCGGGGGCAACCGCGa < 2:537073/150‑1 (MQ=255) ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGAGGTTGCCGGGGGCAACCGCGa < 1:4834187/150‑1 (MQ=255) ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGAGGTTGCCGGGGGCAACCGCGa < 1:3402015/150‑1 (MQ=255) ggAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGAGGTTGCCGGGGGCAACCGCGagcg < 2:3208051/150‑4 (MQ=255) aGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCGGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGccc < 1:976545/150‑1 (MQ=255) gCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCt < 1:4199511/150‑1 (MQ=255) aTACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGc > 2:1661799/1‑150 (MQ=255) tACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCg > 1:5103640/1‑150 (MQ=255) aCCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGa > 2:2272266/1‑150 (MQ=255) ccAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGAc > 1:3043747/1‑150 (MQ=255) aGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTc > 1:4572869/1‑150 (MQ=255) aGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTc > 1:2173254/1‑150 (MQ=255) gCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGcatcgag < 2:2497415/150‑7 (MQ=255) gCAAGCCCGGGAGCACCAGCCGCACGAGGCCGACGCCCCCGTGCACCGGGCGCGCCTGGACCTGCACGAAACCGACTCCACGCACGCCGCTGCAGCCCAGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGcatcgag < 2:5225018/150‑7 (MQ=255) aaGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAgg < 1:4773437/150‑1 (MQ=255) cTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCGCCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGc < 1:4000124/150‑1 (MQ=255) cTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGc < 1:3632553/150‑1 (MQ=255) ggAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCt < 2:1026769/150‑1 (MQ=255) aGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAgc < 1:4110904/150‑1 (MQ=255) gATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGc > 1:1494034/1‑150 (MQ=255) gATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGc > 1:11133/1‑150 (MQ=255) ccGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTCCCCGCACGCCGCGGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGccacc < 2:268820/150‑1 (MQ=255) ccAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCAACCACGACGc > 1:160405/1‑150 (MQ=255) ccAAGTGCACCTGCCGCGCCTGTACCTGCACGAAAACGACTACACCCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCACGATGCCCTGGCGACTCAGGTACGCCTGCACGAGCGCCAGGGCCACCACGACGc > 1:1165938/1‑150 (MQ=255) cAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCacga > 1:702750/1‑146 (MQ=255) cAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCacga < 2:702750/146‑1 (MQ=255) aGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTc > 1:2570810/1‑150 (MQ=255) aCCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGcc > 1:1531526/1‑150 (MQ=255) aCCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCAGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGcc > 2:1461730/1‑150 (MQ=255) cTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAg > 2:3827057/1‑150 (MQ=255) cTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAg < 1:3383890/150‑1 (MQ=255) gcgcCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCt > 2:973899/1‑150 (MQ=255) gcgcCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCt < 1:1074789/150‑1 (MQ=255) gcCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTgg < 1:3763718/150‑1 (MQ=255) ccTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGACAACCTCGATGCCCTGGCGACTCAGGTACGc > 1:3219627/1‑103 (MQ=255) cTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGc > 1:387660/1‑150 (MQ=255) gTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCaa > 2:3697344/1‑150 (MQ=255) gTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCCGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCaa > 1:293929/1‑150 (MQ=255) aCCTGCACGAAACCGACTCCCCGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCACAg < 2:4662777/150‑1 (MQ=255) aCCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAg > 2:1406897/1‑150 (MQ=255) ccTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGc < 2:3384597/150‑1 (MQ=255) tGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGccc > 1:4365433/1‑150 (MQ=255) tGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGccc > 2:5003408/1‑150 (MQ=255) gCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCt < 2:1731128/150‑1 (MQ=255) aCGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTgg > 1:2533206/1‑150 (MQ=255) aaaaCGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGTGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGgcgg < 2:398274/150‑2 (MQ=255) aaaaCGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGgcgc < 2:3043747/150‑1 (MQ=255) aaaCGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCTCCAGGTGCTGGGCAAAGCCCTGGCGCt < 2:2172813/150‑1 (MQ=255) aCGACTCCACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGa < 1:818673/150‑1 (MQ=255) aCGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGa < 2:4621925/150‑1 (MQ=255) gACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGc < 1:1778759/150‑1 (MQ=255) acgcacgcCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGAc > 1:3205614/1‑150 (MQ=255) acgcacgcCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGAc > 1:1223357/1‑150 (MQ=255) gctcgcTGCAGGGCTGCAGCGGGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGc > 2:3161096/4‑150 (MQ=255) cgccgcTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGc < 1:1406897/150‑1 (MQ=255) gccgcTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGcc > 1:2769993/1‑150 (MQ=255) ctcgcTGCAGGGCTGCAGCGTGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGcc > 2:4053512/3‑150 (MQ=255) ctcgcTGCAGGGCTGCAGCGGGCGCTCGCGGTTGCCCCCGGCCACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGcc > 1:1901916/3‑150 (MQ=255) tcgcTGCAGGGCTGCAGCGGGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCt > 2:765493/2‑150 (MQ=255) tcgcTGCAGGGCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCt > 1:2146405/2‑150 (MQ=255) tcgcTGCAGGGCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCt > 1:2146383/2‑150 (MQ=255) tcgcTGCAGGGCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCt > 2:3974117/2‑150 (MQ=255) cTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTc < 1:3106593/150‑1 (MQ=255) cTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTc < 1:3827057/150‑1 (MQ=255) tGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCt < 1:1621819/150‑1 (MQ=255) tGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCt < 2:3444600/150‑1 (MQ=255) gCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTg < 1:4558040/150‑1 (MQ=255) cAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGc > 1:1011778/1‑150 (MQ=255) aGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCa < 2:1770125/150‑1 (MQ=255) gggcTGCAGCGGGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAg < 1:3161096/147‑1 (MQ=255) cccTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGt > 1:2824417/1‑150 (MQ=255) cTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTAt > 1:1050701/1‑150 (MQ=255) tGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCACAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATg > 2:2992138/1‑150 (MQ=255) tGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGgc > 1:3428271/1‑118 (MQ=255) cgagcgCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTa < 1:1871580/150‑1 (MQ=255) gagcgCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGAc > 1:2817510/1‑125 (MQ=255) gagcgCTCGCGGGTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGAc < 2:2817510/125‑1 (MQ=255) ggcatCGAGGTTGCCGGGGGCAACCGCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCgg > 2:2403098/5‑127 (MQ=255) cTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCtt > 1:977720/1‑150 (MQ=255) atCGAGGTTGCCGGGGGCAACCGCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCtt > 1:5271234/2‑150 (MQ=255) tCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGTCAAAGCCCTGGCGCTGAGCCCCGACTCTGCCTTTCTGCAGTATGAGCTAGGGCttt < 1:2272266/150‑1 (MQ=255) tCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCttt < 2:642060/150‑1 (MQ=255) cgcgGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTg < 1:865717/150‑1 (MQ=255) gcgGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTgg < 1:2077256/150‑1 (MQ=255) tGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTGGCTGaa < 1:2527388/150‑1 (MQ=255) gCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTGGCTGAAg < 2:4478698/150‑1 (MQ=255) ccccGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTGGCTGAAgcg > 1:1603854/1‑150 (MQ=255) ccccGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTGGCTGAAgcg > 2:2081485/1‑150 (MQ=255) cccGGCCACCTCGATGCCCTGGCGCCGCCGGGACGCCTGCTCGAGCGCCAGGGCCACCCCGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTCGGGCTTTGGCTGAAgcgc < 2:4510010/150‑1 (MQ=255) cccGGCAACCTCGATGCCCTGGCGACTCATGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTGGCTGAAgcgc > 2:3614864/1‑150 (MQ=255) cccGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTGGCTGAAgcgc > 2:5041175/1‑150 (MQ=255) cccGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTGGCTGAAgcgc > 2:872805/1‑150 (MQ=255) ggCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTGGCTGAAGCGCCAc < 1:1941086/150‑1 (MQ=255) ggCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTGGCTGAAGCGCCAc > 2:2347186/1‑150 (MQ=255) cTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTGGCTGAAGCGCCACGAACAg > 1:1355035/1‑150 (MQ=255) tCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTGGCTGAAGCGCCACGAACAgc > 1:649248/1‑150 (MQ=255) | GCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTGCAGTATGAGCTAGGGCTTTGGCTGAAGCGCCACGAACAGC > NC_002947/3885425‑3885722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |