| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,916,819 | A→G | 5.9% | intergenic (‑67/‑179) | PP_3454 ← / → PP_3455 | transcriptional regulator/multidrug RND transporter membrane fusion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,916,819 | 0 | A | G | 5.9% | 594.6 / 16.1 | 189 | intergenic (‑67/‑179) | PP_3454/PP_3455 | transcriptional regulator/multidrug RND transporter membrane fusion protein |
| Reads supporting (aligned to +/- strand): ref base A (77/99); new base G (2/9); total (79/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.24e-01 | |||||||||||
Only 100 of 192 total aligned reads displayed.
CATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGTCTGCCTTAGC > NC_002947/3916671‑3916968 | cATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAg < 2:650364/150‑1 (MQ=255) aTGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAg < 1:1564105/149‑1 (MQ=255) gAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTcc > 1:5217812/1‑150 (MQ=255) gAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTcc > 1:1739883/1‑150 (MQ=255) cgttgcgttgCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTa < 1:2851170/150‑1 (MQ=255) gttgcgttgcAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAg < 2:2034333/150‑1 (MQ=255) cgttgcAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGc < 2:2597680/150‑1 (MQ=255) ttgcAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGACAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCgg < 2:1156328/150‑1 (MQ=255) ttgcAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCgg < 2:1156316/150‑1 (MQ=255) ttgcAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCgg < 2:3983383/150‑1 (MQ=255) ttgcAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCgg < 2:2065206/150‑1 (MQ=255) ttgcAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCgg < 2:3662590/150‑1 (MQ=255) tgcAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTGAACCCGCTCCTACGGGGACCTGCAGCAGCggg < 1:5165474/150‑1 (MQ=38) tgcAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTGAACCCGCTCCTACGGGGACCTGCAGCAGCggg < 2:1233971/150‑1 (MQ=38) tgcAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCggg < 1:4754647/150‑1 (MQ=255) tgcAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCggg < 1:5349205/150‑1 (MQ=255) tgcAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTCCTACGGGGACCTGCAGCAGCggg < 1:2469936/150‑1 (MQ=38) ggTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAATATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCa < 2:4046317/150‑1 (MQ=255) gTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCAc < 2:5012832/150‑1 (MQ=255) tAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTGAACCCGCTCCTACGGGGACCTGCAGCAGCGGGTTTAcc < 1:3359694/150‑1 (MQ=37) tAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCAcc > 2:587/1‑150 (MQ=255) aGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTGAACCCGCTCCTACGGGGACCTGCAGCAGCGGGTTTAccc < 2:1433056/150‑1 (MQ=37) cTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCcgc > 2:3753575/1‑150 (MQ=255) tGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCcgcg > 2:4202998/1‑150 (MQ=255) tGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCcgcg > 1:4956020/1‑150 (MQ=255) gCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTGAACCCGCTCCTACGGGGACCTGCAGCAGCGGGTTTACCCGCGaa < 2:4645979/150‑1 (MQ=25) gCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGaa < 2:5326620/150‑1 (MQ=255) gCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTGAACCcgctcc < 2:3783665/150‑4 (MQ=255) cGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAag < 1:3404137/150‑1 (MQ=255) gATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAaga > 2:18844/1‑150 (MQ=255) gATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAaga < 1:5097729/150‑1 (MQ=255) cTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGCTGGCCTCTTCGCGGGTGAACCCGCTCCTACGGGGACCTGCAGCAGCGGGTTTACCCGCGAagcgctcgc > 2:3237420/1‑143 (MQ=14) tCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGc < 2:1874573/150‑1 (MQ=255) cGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGca < 2:845375/150‑1 (MQ=255) cAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAgg < 1:10428/150‑1 (MQ=255) ggCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCAc < 2:3367076/126‑1 (MQ=255) tGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCa < 1:3603004/150‑1 (MQ=255) tGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCa < 1:3359119/150‑1 (MQ=255) tcgtcTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTcccc > 2:4767198/1‑103 (MQ=255) tcgtcTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAg > 1:1868043/1‑107 (MQ=255) tcgtcATCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGa < 2:5292499/150‑1 (MQ=255) gtcTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAat < 2:1574708/150‑1 (MQ=255) tcTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACACGCGAAGAGGCCAGCACAGGCCCATGCAGAata > 2:939272/1‑150 (MQ=255) cTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCa > 1:1813102/1‑92 (MQ=255) tCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCTGGTCCCCTTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAg < 1:4194157/150‑1 (MQ=255) gACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGaa < 2:2366889/150‑1 (MQ=255) gACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGaa < 1:1188753/150‑1 (MQ=255) ccAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAAcc > 1:2396920/1‑150 (MQ=255) gAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAAc > 2:455245/1‑150 (MQ=255) gAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAAc > 1:2332734/1‑150 (MQ=255) gAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAAc < 1:4881865/150‑1 (MQ=255) gAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAAc > 1:3901728/1‑150 (MQ=255) aaaTGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCAc < 1:2666552/103‑1 (MQ=255) aaaTGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCa > 2:2213852/1‑150 (MQ=255) aTGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACt < 2:1326180/150‑1 (MQ=255) ttCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGa > 1:4497701/1‑150 (MQ=255) ttCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGa < 1:662467/150‑1 (MQ=255) tCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGAc < 1:4870719/150‑1 (MQ=255) cGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACa < 2:2730343/150‑1 (MQ=255) gCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAgg > 2:1590200/1‑150 (MQ=255) aTAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGAt < 2:3830225/150‑1 (MQ=255) aGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGGGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACTGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCa < 2:4708589/150‑1 (MQ=255) gTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCAtt < 2:5156964/150‑1 (MQ=255) gCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCAttct < 2:1042738/150‑1 (MQ=255) ttGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCAttcttc > 2:1784501/1‑150 (MQ=255) tGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTca < 1:3516151/150‑1 (MQ=255) gggCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGGTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTcac > 2:1462063/1‑150 (MQ=255) tCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACttt < 2:1033709/150‑1 (MQ=255) tGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACttttt > 2:4641311/1‑150 (MQ=255) tGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACttttt > 2:5255666/1‑150 (MQ=255) ggTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTca < 1:4723058/150‑1 (MQ=255) ggTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTca > 1:1235040/1‑150 (MQ=255) gTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTcat > 2:3070327/1‑149 (MQ=255) ttGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCGGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACCGGATCATTCTTCACACTTTTTcaca > 2:1917734/1‑150 (MQ=255) tAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGcc > 1:3928903/1‑150 (MQ=255) gggCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGt < 2:1524933/149‑1 (MQ=255) ggCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTa < 1:4163544/150‑1 (MQ=255) cGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCCTTCTTCACACTTTTTCACACTCGCCCTACAGGTAtt > 1:4296875/1‑150 (MQ=255) gAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTa > 2:3203667/1‑150 (MQ=255) gAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTa > 1:246491/1‑150 (MQ=255) gcgcTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAAc < 1:1590200/150‑1 (MQ=255) gcTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACttttt < 2:1864576/124‑1 (MQ=255) tCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAgccg < 2:1127876/150‑1 (MQ=255) gcgGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAgccgcc > 1:103946/1‑150 (MQ=255) gggTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCa > 1:4544844/1‑150 (MQ=255) gggTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCa < 1:3753575/150‑1 (MQ=255) gggTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCa < 1:443001/150‑1 (MQ=255) ggTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACt > 1:4647525/1‑90 (MQ=255) gTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAgg > 2:2457791/1‑150 (MQ=255) ggaCCTGCAGCAGCGGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCa > 2:3344/3‑150 (MQ=255) aaCCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAg > 2:3460461/1‑150 (MQ=255) aCCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGc > 1:2613278/1‑150 (MQ=255) cccGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATACAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCg > 1:82914/1‑150 (MQ=255) ccGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGt > 1:1446702/1‑150 (MQ=255) gctgcAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGTCTGcc > 1:1940257/1‑150 (MQ=255) gctgcAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGTCTGcc > 1:384182/1‑150 (MQ=255) gctgcAGGTCCCCGTAGGAGCGGGTTCACCCGAGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGTCTGcc < 2:2812424/150‑1 (MQ=255) tgcAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGTCTGCCtt < 1:18844/150‑1 (MQ=255) tgcAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGTCTGCCtt > 2:213498/1‑150 (MQ=255) cAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGTCTGCCTTAg < 1:587/150‑1 (MQ=255) | CATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGTCTGCCTTAGC > NC_002947/3916671‑3916968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |