| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,986,006 | G→T | 7.8% | intergenic (+34/+156) | ilvE → / ← PP_3512 | branched‑chain‑amino acid aminotransferase/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,986,006 | 0 | G | T | 7.8% | 574.9 / 26.5 | 176 | intergenic (+34/+156) | ilvE/PP_3512 | branched‑chain‑amino acid aminotransferase/membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (81/81); new base T (7/7); total (88/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 176 total aligned reads displayed.
CCACGACCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCCGCGCCGGGT > NC_002947/3985861‑3986154 | ccACGACCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGcccc > 1:2267920/1‑147 (MQ=255)ccACGACCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCact > 1:4766904/1‑148 (MQ=255)ccACGACCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAAt > 1:3915049/1‑150 (MQ=255)ccACGACCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAAt > 1:3459095/1‑150 (MQ=255) cACGACCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATg < 1:114696/150‑1 (MQ=255) cACGACCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATg < 1:4540486/150‑1 (MQ=255) cACGACCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATg < 1:1958876/150‑1 (MQ=255) aCCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCAt < 1:2353114/150‑1 (MQ=255) cTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGc > 1:4281940/1‑150 (MQ=255) cTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAAAGGCATGc > 1:2793235/1‑150 (MQ=255) ggAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCATTGCTGGCATGccc < 1:1079956/150‑1 (MQ=255) ggAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGccc < 1:769659/150‑1 (MQ=255) ggAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGccc > 1:553699/1‑150 (MQ=255) ggAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGccc > 1:1494263/1‑150 (MQ=255) aaaaGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCg > 2:556434/1‑150 (MQ=255) aaaGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGt < 1:698143/150‑1 (MQ=255) gTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCATTGCTGGCATGCCCCGttttc < 2:2700666/150‑2 (MQ=255) cGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGACATGCCAGCAATGGCATGCCCCGTTTTTTc < 2:3300185/150‑1 (MQ=255) ggCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGTAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCa < 1:5197242/150‑1 (MQ=255) ggCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCa < 2:365892/150‑1 (MQ=255) cccGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCTtg > 1:4869968/1‑150 (MQ=255) gTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGtt < 2:1161726/150‑1 (MQ=255) aCCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTac < 1:4127048/150‑1 (MQ=255) ccAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTacac > 1:3173229/1‑150 (MQ=255) ccAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTacac > 2:5300419/1‑150 (MQ=255) aGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGccc < 1:2423675/150‑1 (MQ=255) tctACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCt > 1:3526925/1‑150 (MQ=255) tACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCg > 2:1309703/1‑150 (MQ=255) cGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGa < 1:1334431/150‑1 (MQ=255) cGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGa < 2:752504/150‑1 (MQ=255) gCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCg > 1:713771/1‑150 (MQ=255) cTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCACGGTCGCCTGAAACGCCGCAGCTGTATGAAACCGGGGCATGCCAGCACTGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCgg < 2:3097872/150‑1 (MQ=255) cTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCgg < 2:4281940/150‑1 (MQ=255) cTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCgg < 2:786736/150‑1 (MQ=255) tGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCATTGCTGGCATGcccc < 1:3871103/110‑1 (MQ=39) cGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTa < 1:3334556/150‑1 (MQ=255) ggTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTAc < 1:1309703/150‑1 (MQ=255) gTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTAcc > 1:5025301/1‑150 (MQ=255) tATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTAccc < 1:2602084/150‑1 (MQ=255) tATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTAccc < 2:1234209/150‑1 (MQ=255) tCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCcgc < 2:3168509/150‑1 (MQ=255) tCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCcgc > 1:421620/1‑150 (MQ=255) tCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCcgc > 2:25479/1‑150 (MQ=255) tCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCcgc < 2:713771/150‑1 (MQ=255) cAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGtt > 1:4922260/1‑114 (MQ=255) agagCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGaa > 2:4587399/1‑150 (MQ=255) agagCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGaa > 1:569828/1‑150 (MQ=255) agagCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGaa > 2:4587406/1‑150 (MQ=255) agagCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGGAGGAGCGGGTTTACCCGCGaa > 2:2092509/1‑150 (MQ=255) gagCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCcgcggga > 1:5332762/1‑147 (MQ=255) agCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATa < 1:2074127/150‑1 (MQ=255) gcggcgATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAg < 1:998704/150‑1 (MQ=255) cgATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCca < 1:4428338/150‑1 (MQ=255) gTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTa > 1:242271/1‑119 (MQ=255) gTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACAcc > 2:4990770/1‑150 (MQ=255) gCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGc > 1:275829/1‑138 (MQ=255) aCCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCgccagcc > 2:2142598/1‑150 (MQ=255) cAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCaataa > 1:3737129/1‑150 (MQ=255) cAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCaataa > 1:1370874/1‑150 (MQ=255) aGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCaataat > 1:2222410/1‑150 (MQ=255) aGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCaataat < 1:3696368/150‑1 (MQ=255) ggCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATg > 2:156318/1‑150 (MQ=255) gCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGc > 1:1757880/1‑150 (MQ=255) ggATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTg < 1:2510173/150‑1 (MQ=255) gATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTgg < 2:5208941/150‑1 (MQ=255) tCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGga < 1:5276840/150‑1 (MQ=255) tCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGga < 2:4168641/150‑1 (MQ=255) cGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGgag < 1:1766268/150‑1 (MQ=255) tCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGAt > 2:565595/1‑150 (MQ=255) tCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGAt > 2:4412507/1‑150 (MQ=255) tCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTATTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGAt < 2:2379784/150‑1 (MQ=255) cAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATc < 2:3915049/150‑1 (MQ=255) gTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCg > 1:2009742/1‑150 (MQ=255) cGCCTGAACCGCATCAGCTGGATGAACACGGGGCATGCCAGCACTGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGtt < 2:2793235/150‑1 (MQ=255) cGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGtt < 1:4871034/150‑1 (MQ=255) cGCCTGAAACGCATCAGCTGTATGAAAACGGGGCAGGCCAGCACGGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGTATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGtt < 2:2793180/150‑1 (MQ=255) cTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCACGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTc < 1:3278792/150‑1 (MQ=255) tGACACGCAGCAGCTGGATGACAACGGGGCATGCCAGCACTGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGGAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTGGTCa < 2:1494598/150‑1 (MQ=255) tGAAACGCCTCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCa < 2:1192198/150‑1 (MQ=255) tGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCa < 2:2812065/150‑1 (MQ=255) tGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCa > 1:3150127/1‑150 (MQ=255) tGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCa < 1:3633692/150‑1 (MQ=255) tGAAACGCAGCAGCTGTATGAAAACGGGGCAGGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCa < 2:3727759/150‑1 (MQ=255) cAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGc > 2:2746780/1‑150 (MQ=255) acatgaaaaaaCGGGGCATGCCATTGCTGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCAtt > 2:2093306/8‑150 (MQ=38) aaaaaaCGGGGCATGCCATTGCTGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCgg > 2:1983150/3‑150 (MQ=255) ggggCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGcc > 2:3888806/1‑150 (MQ=255) ggggCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGcc > 2:5045601/1‑150 (MQ=255) gggCATGCCATTGCTGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTa < 1:2720085/138‑1 (MQ=255) gggCATGCCATTGCTGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTa > 2:2720085/1‑138 (MQ=255) gggCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGccc > 1:1072709/1‑150 (MQ=255) gggCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGGTGTCAGTGCAGCCGCATTAGCGGGCAAGccc > 2:3239237/1‑150 (MQ=255) ggCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCcg > 2:4894546/1‑150 (MQ=255) gCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCcgc < 1:1257597/150‑1 (MQ=255) cAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCCGCGCCggg > 2:350895/1‑150 (MQ=255) cAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCCGCGCCggg > 2:1652475/1‑150 (MQ=255) cAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCCGCGCCggg > 2:4095272/1‑150 (MQ=255) aGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCCGCGCCGGGt < 2:4766904/150‑1 (MQ=255) aGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCCGCGCCGGGt < 2:3459095/150‑1 (MQ=255) aGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCCGCGCCGGGt < 1:3912042/150‑1 (MQ=255) | CCACGACCTGGAAAAGGTCGGCCCGGTTACCCAGAAGCTCTACAACGAGCTGACCGGTATCCAGAGCGGCGATGTAGAGGCACCGGCAGGCTGGATCGTCAAGGTCGCCTGAAACGCATCAGCTGTATGAAAACGGGGCATGCCAGCAATGGCATGCCCCGTTTTTTCATGTGTTTACACGGCCCCCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCACACCCGCCAGCCAATAATGCCTGGGAGATCACCGTTGTCAGTGCAGCCGCATTAGCGGGCAAGCCCGCGCCGGGT > NC_002947/3985861‑3986154 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |