Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,999,662 T→G 5.7% L128V (TTG→GTG)  PP_3526 → AraC family transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,999,6620TG 5.7% 531.4 / 16.4 168L128V (TTG→GTG) PP_3526AraC family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (81/77);  new base G (3/7);  total (84/84)
Fisher's exact test for biased strand distribution p-value = 3.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01

Only 100 of 171 total aligned reads displayed.

CCTGGGGCTGGAACTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCACCCCGGCCAGCTTTACCCTCGACCG  >  NC_002947/3999514‑3999810
                                                                                                                                                    |                                                                                                                                                    
ccTGGGGCTGGAACTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCtt                                                                                                                                                     <  2:3354053/150‑1 (MQ=255)
     ggCTGGAACTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGggcg                                                                                                                                                <  1:2001281/150‑1 (MQ=255)
     ggCTGGAACTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGAGCCGCCCAAGGCCATGCCGTGggcg                                                                                                                                                <  1:1509677/150‑1 (MQ=255)
      gCTGGAACTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCAAGGCCATGCCGTGggcgg                                                                                                                                               <  2:3449808/150‑1 (MQ=255)
       cTGGAACTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGggcggc                                                                                                                                              <  2:1313197/150‑1 (MQ=255)
       cTGGAACTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCAAGGCCATGCCGTGggcggc                                                                                                                                              <  2:957764/150‑1 (MQ=255)
       cTGGAACTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCAAGGCCATGCCGTGggcggc                                                                                                                                              <  1:1821316/150‑1 (MQ=255)
        tGGAACTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCAAGGCCATGCCGTGggcggcg                                                                                                                                             <  1:1406441/150‑2 (MQ=255)
           aaCTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTtgt                                                                                                                                          <  1:2225378/150‑1 (MQ=255)
           aaCTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTtgt                                                                                                                                          <  2:3011187/150‑1 (MQ=255)
           aaCTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCAAGGCCATGCCGTGggcggcgcaa                                                                                                                                          <  1:4902606/150‑5 (MQ=255)
           aaCTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGGACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTtgt                                                                                                                                          <  1:518939/150‑1 (MQ=255)
               ggtggCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGaa                                                                                                                                      >  2:1016615/1‑150 (MQ=255)
                gtggCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAAc                                                                                                                                     >  2:4127373/1‑150 (MQ=255)
                gtggCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAAc                                                                                                                                     <  1:2588111/150‑1 (MQ=255)
                  ggCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACgg                                                                                                                                   >  2:3549555/1‑150 (MQ=255)
                  ggCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACgg                                                                                                                                   >  2:742344/1‑150 (MQ=255)
                   gCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGgc                                                                                                                                  <  1:1045472/150‑1 (MQ=255)
                     cACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGgcgc                                                                                                                                >  2:3679007/1‑150 (MQ=255)
                      aCCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGcc                                                                                                                               >  1:2150974/1‑150 (MQ=255)
                       ccGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCt                                                                                                                              <  1:5302862/150‑1 (MQ=255)
                        cGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTg                                                                                                                             <  2:849251/150‑1 (MQ=255)
                           gCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGtt                                                                                                                          <  1:4657216/150‑1 (MQ=255)
                               tCCGCTGCGGCGCTGCAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAACCGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCtt                                                                                                                      <  2:401222/150‑1 (MQ=255)
                                 cGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTgg                                                                                                                    >  1:2456531/1‑150 (MQ=255)
                                  gCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGc                                                                                                                   >  2:3834704/1‑150 (MQ=255)
                                   cTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGcc                                                                                                                  >  2:692396/1‑150 (MQ=255)
                                          gcTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCgg                                                                                                           <  1:3681059/150‑1 (MQ=255)
                                           cTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCggg                                                                                                          <  1:475344/150‑1 (MQ=255)
                                           cTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGGACCCGGAACTCGATCGCCTGCTAAACGAGTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCggg                                                                                                          <  1:3203159/150‑1 (MQ=255)
                                            tGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCgggg                                                                                                         <  2:1371245/150‑1 (MQ=255)
                                            tGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACAACTCAAGTACACGGAACTCGATCGCCTGCTAAACGATTGCGCCTCCCACGGCATGGCCTTGGGCGGCTTGTGGAACTGCGCCTGGTTCCTTGTCCGTGCCgggg                                                                                                         >  1:4461792/1‑150 (MQ=255)
                                              aaGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGAGTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTg                                                                                                       >  2:4453484/1‑150 (MQ=255)
                                               aGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGc                                                                                                      <  1:1548439/150‑1 (MQ=255)
                                                 gAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTg                                                                                                    <  2:2456531/150‑1 (MQ=255)
                                                   gCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGga                                                                                                  <  1:742344/150‑1 (MQ=255)
                                                    cTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGgac                                                                                                 <  1:4834924/150‑1 (MQ=255)
                                                     tGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGgacg                                                                                                >  1:3959038/1‑150 (MQ=255)
                                                      agACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGgacga                                                                                               >  1:4325197/2‑150 (MQ=255)
                                                         ccTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTa                                                                                            >  1:1659826/1‑150 (MQ=255)
                                                          ctgctgGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTAc                                                                                           >  1:1028903/1‑150 (MQ=255)
                                                           tgctgGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACg                                                                                          <  2:5166870/150‑1 (MQ=255)
                                                           tgctgGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACg                                                                                          <  2:1215809/150‑1 (MQ=255)
                                                           tgctgGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACg                                                                                          <  1:3569552/150‑1 (MQ=255)
                                                              tggtggTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGtt                                                                                       >  1:1752362/1‑150 (MQ=255)
                                                              tggtggTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGtt                                                                                       >  1:1752553/1‑150 (MQ=255)
                                                                gtggtCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTgc                                                                                     <  1:2997236/150‑1 (MQ=255)
                                                                 tggtCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGATCTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCAGGGGTGCTGGACGACTACGGTTgca                                                                                    <  1:3659260/150‑1 (MQ=255)
                                                                  ggtCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTgcag                                                                                   <  1:1189276/150‑1 (MQ=255)
                                                                      tGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATc                                                                               >  2:4525258/1‑150 (MQ=255)
                                                                      tGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATc                                                                               >  1:636424/1‑150 (MQ=255)
                                                                      cgcggcgGCTTGCGCACACCACGCCACTACCCGGACCTCGATCGCCAGCTCACCGCTTGCGCCGCCCACGGCATGGCCTTGGGCGGCTAGTGGAACGGCGCCTGGGGCCTTGGCCGTGCCGGGGTGCTGGACGACAACGGTTGCAGCATc                                                                               <  2:1511788/149‑1 (MQ=255)
                                                                              cTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGa                                                                       <  1:4994153/150‑1 (MQ=255)
                                                                              cTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGa                                                                       <  2:4069003/150‑1 (MQ=255)
                                                                              cTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGa                                                                       <  1:4262409/150‑1 (MQ=255)
                                                                               ttGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAg                                                                      >  2:1356749/1‑150 (MQ=255)
                                                                                 gcgcACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTCGCAGCATCCACCCCGAGCa                                                                    >  2:4652999/1‑150 (MQ=255)
                                                                                   gcACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAAc                                                                  >  2:2980308/1‑150 (MQ=255)
                                                                                   gcACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAAc                                                                  >  2:3171514/1‑150 (MQ=255)
                                                                                   gcACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAAc                                                                  >  2:1881365/1‑150 (MQ=255)
                                                                                   gcACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAAc                                                                  >  1:601955/1‑150 (MQ=255)
                                                                                     acacCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGt                                                                >  2:4379191/1‑150 (MQ=255)
                                                                                       accacTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGc                                                              >  1:3243949/1‑150 (MQ=255)
                                                                                        ccacTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGcc                                                             >  2:3283909/1‑150 (MQ=255)
                                                                                         cacTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCa                                                            >  1:1879099/1‑150 (MQ=255)
                                                                                         cacTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCa                                                            <  1:3086573/150‑1 (MQ=255)
                                                                                          acTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAg                                                           <  2:4783171/150‑1 (MQ=255)
                                                                                          acTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAg                                                           >  1:3506406/1‑150 (MQ=255)
                                                                                            tCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCggg                                                                                                          >  1:2331221/1‑101 (MQ=255)
                                                                                            tCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCggg                                                                                                          <  2:2331221/101‑1 (MQ=255)
                                                                                            tCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGcc                                                         >  2:3630474/1‑150 (MQ=255)
                                                                                            tCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGcc                                                         >  2:1317604/1‑150 (MQ=255)
                                                                                            tCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGcc                                                         >  1:1323118/1‑150 (MQ=255)
                                                                                              aaGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTg                                                       >  1:2067947/1‑150 (MQ=255)
                                                                                                   cccGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCACCGTGCCAGCCTGTCGGa                                                  >  2:1861357/1‑150 (MQ=255)
                                                                                                   cccGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGa                                                  >  2:4681603/1‑150 (MQ=255)
                                                                                                           tCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGcc                                          <  2:1651775/150‑1 (MQ=255)
                                                                                                               tCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCa                                      <  2:2542155/150‑1 (MQ=255)
                                                                                                               tCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCa                                      >  1:3327428/1‑150 (MQ=255)
                                                                                                                 gCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCaca                                    >  2:3914993/1‑148 (MQ=255)
                                                                                                                     gCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCg                                >  2:2727169/1‑150 (MQ=255)
                                                                                                                      cTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGc                               >  2:3129311/1‑150 (MQ=255)
                                                                                                                       tAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCa                              >  1:2694995/1‑150 (MQ=255)
                                                                                                                        aaaCGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCAt                             <  1:1644531/150‑1 (MQ=255)
                                                                                                                         aaCGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATc                            >  1:2432557/1‑150 (MQ=255)
                                                                                                                         aaCGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATc                            >  1:1720623/1‑150 (MQ=255)
                                                                                                                          aCGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAAAGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGAAGCATCCACCCCGAGCAACGTGACAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCa                           >  2:1444404/1‑150 (MQ=255)
                                                                                                                            gATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCAcc                         >  1:5096131/1‑150 (MQ=255)
                                                                                                                              ttGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCAcccc                       <  1:4294765/150‑1 (MQ=255)
                                                                                                                              ttGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCAcccc                       <  2:2348412/150‑1 (MQ=255)
                                                                                                                              acaagccgccCAAGGCCATGCCGTGGGCGGCTTATGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCAcccc                       >  1:4564625/5‑150 (MQ=255)
                                                                                                                                 cgccgcCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCACCCCGGc                    >  2:210944/1‑150 (MQ=255)
                                                                                                                                   ccgccCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCACCCCGGCCa                  >  2:3727029/1‑150 (MQ=255)
                                                                                                                                         aCGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCACCCCGGCCAGCTTTa            >  1:1870328/1‑150 (MQ=255)
                                                                                                                                          cGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCACCCCGGCCAGCTTTAc           <  1:921192/150‑1 (MQ=255)
                                                                                                                                                ggCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCACCCCGGCCAGCTTTACCCTCGa     <  1:692396/150‑1 (MQ=255)
                                                                                                                                                ggCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCACCCCGGCCAGCTTTACCCTCGa     <  1:4836613/150‑1 (MQ=255)
                                                                                                                                                 gCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCACCCCGGCCAGCTTTACCCTCGAc    <  2:663945/150‑1 (MQ=255)
                                                                                                                                                  ccTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCACCCCGGCCAGCTTTACCCTCGAcc   >  2:4712258/1‑150 (MQ=255)
                                                                                                                                                  ccTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCACCCCGGCCAGCTTTACCCTCGAcc   <  2:5396118/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CCTGGGGCTGGAACTGGTGGCCACCGAGCTGTCCGCTGCGGCGCTGAAGGAGCTGGACCTGCTGGTGGTCTGCGGCGGCTTGCGCACACCACTCAAGTACCCGGAACTCGATCGCCTGCTAAACGATTGCGCCGCCCACGGCATGGCCTTGGGCGGCTTGTGGAACGGCGCCTGGTTCCTTGGCCGTGCCGGGGTGCTGGACGACTACGGTTGCAGCATCCACCCCGAGCAACGTGCCAGCCTGTCGGAGCGCAGCCCGCAAACCCGCATCACCCCGGCCAGCTTTACCCTCGACCG  >  NC_002947/3999514‑3999810

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: