Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,391,474 T→A 9.8% T411T (ACA→ACT)  PP_3865 ← tail protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,391,4740TA 9.8% 491.2 / 13.6 177T411T (ACA→ACT) PP_3865tail protein
Reads supporting (aligned to +/- strand):  ref base T (75/76);  new base A (17/3);  total (98/79)
Fisher's exact test for biased strand distribution p-value = 3.43e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 187 total aligned reads displayed.

TAGGCCTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCGGGCAG  >  NC_002947/4391325‑4391623
                                                                                                                                                     |                                                                                                                                                     
tAGGCCTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACt                                                                                                                                                       <  2:2464471/150‑1 (MQ=255)
gaGGCCTTGATCAGCTCCCACAGGGCGCTGAAGACCGGCCCGACCTTCTCCCAGTTGGCGACGCTCAGACCGGCCGCCGCCGCGAGCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACt                                                                                                                                                       <  2:1812476/149‑1 (MQ=255)
  ggCCTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACtgt                                                                                                                                                     <  1:3821700/150‑1 (MQ=255)
   gCCTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACtgtg                                                                                                                                                    <  1:4448657/150‑1 (MQ=255)
     cTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGc                                                                                                                                                  <  2:1275960/150‑1 (MQ=255)
      ttGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCGGGCGCGGTCCCCGCGGCGGTGAGGGCAATAGGCGTGGGCGCGAAGGCCAAACCCAGCACCCCCGTGGGCACAGTgggc                                                                                                                                                 >  1:748458/1‑148 (MQ=255)
        gATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCcgc                                                                                                                                               <  1:4492190/150‑1 (MQ=255)
         aTCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGAGACCCCCCGCGGGCAGGCCCAGCGGCGGGGCCGCGACGGCCACCCCCAGCACCCCCCGGGCCACCGTGGGcgcg                                                                                                                                              >  1:2839165/1‑150 (MQ=255)
          tCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACAGTGGCcacgc                                                                                                                                             <  1:2760155/150‑2 (MQ=255)
          tCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCCAGCACCCCCGTGGCCACTGGGGCCGCGa                                                                                                                                             >  2:3002252/1‑150 (MQ=255)
            aGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGCGGCCACAGTGGCcacgcgg                                                                                                                                           <  2:4731146/150‑4 (MQ=255)
             gCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAaca                                                                                                                                          <  1:3390392/150‑1 (MQ=255)
               tCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCGGCCGCGCTCCCCCCGGCGCTCACGCCAATCCGCGGGGGCGCGAAGGCCCCACCCCGCACCCCCGGGGCCCCGGTGGCCCCGCACAcc                                                                                                                                        >  1:4641687/1‑150 (MQ=255)
               tCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAAACGGCGGGGCCGCGCAGGCCACACCGAGCACCCGCGTGGCCACGGTGGCCGCGAACAcc                                                                                                                                        >  1:4995107/1‑150 (MQ=255)
                 ccACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCGGCCGCGCGCCCCCCCGCGCTCAGGCCAAACCGCGTGGGCCCGGAGGCCCCCCCCCGCACCCCCCTGGCCACAGTGGCCGCGAACAcccc                                                                                                                                      >  1:5023725/1‑148 (MQ=255)
                  cacaGGGCGCTGAAGATCGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACAccgcc                                                                                                                                     <  1:1964388/150‑1 (MQ=255)
                   acaGGGCGCTGAAGAACGGCCCGACCTTCTCCCAATTGGCGACGATCAGACCGGCCGCCGCCGCGATCACCCCGGCGCTCAGGCCAAAAGGCGTGGCCGCCAAGGGCACCCCGAGCACCCCCCTGGCCAAAGTGGCCGCGAacaaccccc                                                                                                                                    >  2:1954538/1‑144 (MQ=255)
                              aagaaCGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGcgcg                                                                                                                         <  2:160511/150‑1 (MQ=255)
                                gaaCGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGt                                                                                                                       <  1:3310744/150‑1 (MQ=255)
                                   cGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGaa                                                                                                                    <  1:9507/150‑1 (MQ=255)
                                    ggCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAg                                                                                                                   <  1:1526180/150‑1 (MQ=255)
                                      cccGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGgc                                                                                                                 <  2:4503912/150‑1 (MQ=255)
                                         gACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATAAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCCCCCGCGTGGCCACAGTGGCCGCGAACACCGCCGCACCCCGCGCGGTGAAGgccgc                                                                                                              >  2:3241245/1‑150 (MQ=255)
                                               ctcCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGc                                                                                                        <  1:1760007/150‑1 (MQ=255)
                                               ctcCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCCCTCCCCCCCGCGCGCACGCCAAACGGCGGGGCCCCGCAGGCCCCACCGCCCACCCCCCGGGCCCCAGTGGCCGCCAACACCCCCCCCCCCCGCGCGGGGGAGGCCGCCCCCGc                                                                                                        >  1:3192707/1‑150 (MQ=255)
                                                 cccAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCaa                                                                                                      <  1:4039292/150‑1 (MQ=255)
                                                 cccAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCCGCaa                                                                                                      <  2:5004347/150‑1 (MQ=255)
                                                  ccAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCCGCGTGGCCGCGAAGGCCACACCCAGCACCCGCCTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAAt                                                                                                     >  2:781497/1‑150 (MQ=255)
                                                     gTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGAc                                                                                                  <  1:3178789/150‑1 (MQ=255)
                                                         gCGACGATCAGACCGGCCGCCGCCCCGCTACCCCCCGCGAGCAGGCCAAACCGCGGGGCCCCGAACGCCACAACCAGCACCCCCGTCGCCACGGTGGGCGCGAACACCCCCGCACCCCGCGCGGGGAAGGCCGCCCCCGCAAAGACGATg                                                                                              >  2:695426/1‑150 (MQ=255)
                                                           gacgaTCAGACCGGCCGCCGCCGCGATCCCCCCGGCGCTCAGGCCAATCGGCGTGGCCGCGAAGGCCCCACCGAGCACCCGCGTGGCCCCTGTGGCCGCGAACACCGCCGCACGCAGCGCGGGGGAGGCCGCCCCGGCCCGGACGATGcc                                                                                            >  2:4654515/1‑150 (MQ=255)
                                                            acgaTCAGACCGGCCGCCGCCCCGATCCCCCCCGCGATCAGGCCCATAGGCGTGGCCGCCAAGGCCACACCGAGCACCCCCCTGGCCACAGTGGCCGCGAACACCGCCCCACCCCCCGCGGGGAAGGCCGCCCCCGCAATGACGCTGCcg                                                                                           >  1:4343286/1‑150 (MQ=255)
                                                                tCAGACCGGCCGCCGCCGCGCTACCCCCCGCGATCAGGCCAATAGGCGTGGCCGCCAACGCCACAACCAGCACCCCCGTGGCCCCAGTGGCCCCGAACACCCCCCCACCCAGCCCGGTGAAGGCCGCCCCCGCAAAGACGAAGccccccc                                                                                       >  2:533104/1‑145 (MQ=255)
                                                                tCAGACCAGCCGCCGCCGCGATACCCCCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACAGTGGCCGCGAACACCCCCGCACGCAGCGCGGTGAAGGCCGCCCCCGCACTGACGCTGCCgcgcc                                                                                       >  2:1341659/1‑149 (MQ=255)
                                                                  aGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCAcc                                                                                     <  2:1155512/150‑1 (MQ=255)
                                                                       cctgaccgccgcGATCCCCGCGGCGGTCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCACTGACGATGCCGCGCACCAACTg                                                                                >  2:325823/6‑150 (MQ=255)
                                                                        gccgccgccGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGc                                                                               <  2:4549825/150‑1 (MQ=255)
                                                                         gcgccgccgcGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACTCCGAGCACCCGCGTGTCCACTGTGGCCGCGAACACCGCCGCACGCTGAGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCATCTGCg                                                                              <  1:662304/149‑1 (MQ=255)
                                                                         ccgccgccgCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCg                                                                              <  1:233717/150‑1 (MQ=255)
                                                                          cgccgccgcGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCgg                                                                             <  2:4078354/150‑1 (MQ=255)
                                                                          cgccgccgcGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCgg                                                                             <  1:2567230/150‑1 (MQ=255)
                                                                              gccgcGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTg                                                                         >  2:1427323/1‑150 (MQ=255)
                                                                              gccgcGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTg                                                                         >  2:5357063/1‑150 (MQ=255)
                                                                              gccgcGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTg                                                                         <  2:314834/150‑1 (MQ=255)
                                                                               ccgcGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGt                                                                        >  1:2615941/1‑150 (MQ=255)
                                                                               ccgcGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGt                                                                        <  1:3646445/150‑1 (MQ=255)
                                                                                 gcgATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGGGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCg                                                                      <  2:3733774/150‑1 (MQ=255)
                                                                                 ctgATCGCCGCGGGGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGtt                                                                          >  1:268617/3‑146 (MQ=255)
                                                                                     tCCCCGCGGCGATCAGGCCAATCGGCGTGTCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGACGCGCACCAACTGCGGGTTGTCGCTGa                                                                  >  1:424087/1‑150 (MQ=255)
                                                                                     tCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGa                                                                  <  1:5276955/150‑1 (MQ=255)
                                                                                     tCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGa                                                                  <  2:58161/150‑1 (MQ=255)
                                                                                       cccGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGatc                                                                >  2:4946842/1‑150 (MQ=255)
                                                                                       cccGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGatc                                                                <  2:1859770/150‑1 (MQ=255)
                                                                                          gcggcgATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGatcatc                                                             >  1:1337685/1‑150 (MQ=255)
                                                                                           cggcgATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCt                                                            <  2:2914197/150‑1 (MQ=255)
                                                                                               gATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTgcgc                                                        <  1:566484/150‑1 (MQ=255)
                                                                                               gATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTgcgc                                                        <  1:2117592/150‑1 (MQ=255)
                                                                                                  gcggCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCat                                                     >  2:5397340/3‑150 (MQ=255)
                                                                                                  cAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCat                                                     <  1:4428627/150‑1 (MQ=255)
                                                                                                   aGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCata                                                    >  2:5419201/1‑150 (MQ=255)
                                                                                                     gCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATg                                                  >  2:5222376/1‑150 (MQ=255)
                                                                                                       cAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGc                                                >  2:17916/1‑150 (MQ=255)
                                                                                                       cAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGc                                                >  1:4954674/1‑150 (MQ=255)
                                                                                                       cAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGc                                                <  2:2630240/150‑1 (MQ=255)
                                                                                                        aaTCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGGGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCt                                               >  2:30351/1‑150 (MQ=255)
                                                                                                             gCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATcc                                          >  1:2925174/1‑150 (MQ=255)
                                                                                                              cGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCa                                         >  2:1846135/1‑150 (MQ=255)
                                                                                                                   ccGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGcc                                    <  2:4587233/150‑1 (MQ=255)
                                                                                                                    cgcgAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATgg                                                 >  1:4643541/1‑136 (MQ=255)
                                                                                                                    cgcgAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCg                                   >  2:2520292/1‑150 (MQ=255)
                                                                                                                     gcgAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGc                                  >  2:2122536/1‑150 (MQ=255)
                                                                                                                     gcgAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGc                                  >  2:2122379/1‑150 (MQ=255)
                                                                                                                      cgAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCa                                 <  2:4210067/150‑1 (MQ=255)
                                                                                                                        aaGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGt                               >  1:3874843/1‑150 (MQ=255)
                                                                                                                          ggCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTg                             >  1:3720868/1‑150 (MQ=255)
                                                                                                                           gCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAg                                                                                                                   <  1:848823/63‑1 (MQ=255)
                                                                                                                             cacaCCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTc                          >  2:871239/1‑150 (MQ=255)
                                                                                                                             cacaCCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTc                          <  2:2925174/150‑1 (MQ=255)
                                                                                                                             cacaCCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTc                          >  1:1797632/1‑150 (MQ=255)
                                                                                                                             cacaCCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTc                          <  1:1885080/150‑1 (MQ=255)
                                                                                                                              acacCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCg                         >  2:2905586/1‑150 (MQ=255)
                                                                                                                               cacCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGa                        >  2:3386175/1‑150 (MQ=255)
                                                                                                                               cacCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGa                        <  2:653456/150‑1 (MQ=255)
                                                                                                                                       aCCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCa                <  2:4641687/150‑1 (MQ=255)
                                                                                                                                        cccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAt               <  2:1407253/150‑1 (MQ=255)
                                                                                                                                        cccGCGTGGCCACTGGAGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAt               >  1:4162692/1‑150 (MQ=255)
                                                                                                                                         ccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAtt              <  1:1006257/150‑1 (MQ=255)
                                                                                                                                         ccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAtt              >  2:3524344/1‑150 (MQ=255)
                                                                                                                                         ccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAtt              >  1:1140268/1‑150 (MQ=255)
                                                                                                                                         ccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAtt              >  1:4153308/1‑150 (MQ=255)
                                                                                                                                         ccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAtt              >  1:4824018/1‑150 (MQ=255)
                                                                                                                                         ccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAtt              >  2:4352566/1‑150 (MQ=255)
                                                                                                                                         ccGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAtt              >  2:3523887/1‑150 (MQ=255)
                                                                                                                                         ccGCGTGGCCACTGTGGCCGCGAACAACGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCAtt              >  1:2870946/1‑150 (MQ=255)
                                                                                                                                            cgTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGAt           <  1:3339821/150‑1 (MQ=255)
                                                                                                                                             gcggCCACAGTGGCCACGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATg          >  1:4505216/3‑150 (MQ=255)
                                                                                                                                             gTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATg          >  1:1279658/1‑150 (MQ=255)
                                                                                                                                                gCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCAGGCAATGACGATGCCGCTCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCTGTTGCTCGAGCTCCGCTTTGATGCCg       <  2:3040455/150‑1 (MQ=255)
                                                                                                                                                     tgtgGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCGGgcag  >  1:1288526/1‑150 (MQ=255)
                                                                                                                                                     tgtgGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCGGgcag  >  1:1288278/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TAGGCCTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTTGGCGACGATCAGACCGGCCGCCGCCGCGATCCCCGCGGCGATCAGGCCAATCGGCGTGGCCGCGAAGGCCACACCGAGCACCCGCGTGGCCACTGTGGCCGCGAACACCGCCGCACGCAGCGCGGTGAAGGCCGCCCCGGCAATGACGATGCCGCGCACCAACTGCGGGTTGTCGCTGATCATCTGCGCCATATGGCTGATCCACGGCCGCAGTTGCTCGAGCACCGCATTGATGCCGGGCAG  >  NC_002947/4391325‑4391623

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑