| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,432,050 | T→G | 5.5% | intergenic (+37/‑147) | PP_3924 → / → PP_3925 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,432,050 | 0 | T | G | 5.5% | 438.5 / 9.3 | 131 | intergenic (+37/‑147) | PP_3924/PP_3925 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (53/70); new base G (2/6); total (55/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 131 total aligned reads displayed.
GGGTATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGAC > NC_002947/4431902‑4432194 | gggTATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTg > 1:3086502/1‑150 (MQ=255) gTATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGAc < 2:4273125/150‑1 (MQ=255) gTATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGAc < 2:4272949/150‑1 (MQ=255) tATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGGAAAACCGAAGCCTGACg < 1:3847775/150‑1 (MQ=255) aTCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACgg < 1:5407915/150‑1 (MQ=255) gTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCtt < 1:5235050/150‑1 (MQ=255) tAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTc < 1:3009330/150‑1 (MQ=255) tAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTc > 1:236354/1‑150 (MQ=255) tAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTc > 1:1014937/1‑150 (MQ=255) gcggcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑t > 2:5104328/1‑150 (MQ=255) gcggcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCGG‑t < 1:3169894/150‑1 (MQ=255) cggcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑tt < 1:1591003/150‑1 (MQ=255) cgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGGTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑ttttt < 1:5112120/150‑1 (MQ=255) gAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCGG‑tttttc < 1:4082659/150‑2 (MQ=255) gAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCGG‑tttttc < 1:1330235/150‑2 (MQ=255) aaaCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑ttttttt > 2:658961/1‑150 (MQ=255) acccGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACCTGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑tttttttt < 2:4977605/148‑1 (MQ=255) acccGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑tttttttt < 2:4250387/148‑1 (MQ=255) aaCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCAAAAAACCGAAGCCGTCAGGCTTCGG‑tttttcga < 2:1393373/150‑4 (MQ=255) aCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑tttttttcg < 1:5020435/150‑3 (MQ=255) cGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGcc < 2:3919616/150‑1 (MQ=255) gCATGCAGGCCTACATGGGTGGCAAGCTGCGGGTTGAAGGCGACAAGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCa > 2:4332324/1‑150 (MQ=255) cATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCAt > 2:387139/1‑150 (MQ=255) gCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCg < 2:1057302/150‑1 (MQ=255) cAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCgg < 2:1569545/150‑1 (MQ=255) aGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGt < 2:2638354/150‑1 (MQ=255) aGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGt < 1:3848839/150‑1 (MQ=255) ccTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCa < 1:2400287/150‑1 (MQ=255) gggTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATcc < 1:3416753/150‑1 (MQ=255) gggTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATcc < 1:3698703/150‑1 (MQ=255) gggTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCAGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TATTTTTTGCCCTGCATACGGTGCAGTGATcc > 2:3933870/1‑150 (MQ=255) gCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAg < 2:1471422/150‑1 (MQ=255) gCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAac < 1:2438137/150‑1 (MQ=255) cTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAac < 2:4093002/150‑1 (MQ=255) ggTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTc < 1:4884419/150‑1 (MQ=255) ggTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGGTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTc < 1:2149267/150‑1 (MQ=255) gTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCa > 2:4083936/1‑150 (MQ=255) gTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCa < 2:349202/150‑1 (MQ=255) gTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCa > 1:2355571/1‑150 (MQ=255) aaGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTa > 2:2422624/1‑150 (MQ=255) aaGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTa > 2:1392473/1‑150 (MQ=255) gCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTAttt < 2:1463745/150‑1 (MQ=255) cGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTAttt < 2:471922/150‑1 (MQ=255) gACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTAtt < 2:2291963/147‑1 (MQ=255) gACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTAtt > 1:2291963/1‑147 (MQ=255) gACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTgg > 2:907419/1‑150 (MQ=255) gatgCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCTGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACAt < 2:1926618/150‑1 (MQ=255) gatgCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACAt > 1:3574297/1‑150 (MQ=255) gatgCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACAt > 1:3573857/1‑150 (MQ=255) tGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGAc < 1:2783808/150‑1 (MQ=255) tCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGa > 2:1608417/1‑150 (MQ=255) cGATGAAACTCAGCGAGCTGGTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGAt < 1:4703660/150‑1 (MQ=255) gATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGAtt > 2:3611632/1‑150 (MQ=255) aTGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTg > 2:3196440/1‑150 (MQ=255) gAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGtt < 2:4399729/150‑1 (MQ=255) aaCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTcc < 1:2370712/150‑1 (MQ=255) aaCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTcc < 1:1327677/150‑1 (MQ=255) aCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCGTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCa > 1:3664467/1‑150 (MQ=255) tCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAAc > 1:2057630/1‑150 (MQ=255) tccggtGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAATCCGAAGCCTGACGGCTGCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACCCCCTCTCCTAGTTGGCCCATGGGACGATTGGTCGAGCCCTg > 2:5134607/6‑150 (MQ=255) tGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGa < 1:658961/150‑1 (MQ=255) tGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGa > 1:1006978/1‑150 (MQ=255) tGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGa > 2:4065791/1‑150 (MQ=255) gTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGAc > 2:2382768/1‑150 (MQ=255) gTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGAc > 1:562027/1‑150 (MQ=255) ttCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCgg < 2:332068/81‑1 (MQ=255) ttCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGAcc < 2:4990621/150‑1 (MQ=255) cccGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCAt < 1:4744417/150‑1 (MQ=255) ccGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGCCGATTGTTCCAACCCTGGCGGACCAtt > 1:1350593/1‑150 (MQ=255) ccGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCAtt < 1:907419/150‑1 (MQ=255) ccGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCGTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCAtt > 2:1521131/1‑150 (MQ=255) gTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAg < 1:4551481/150‑1 (MQ=255) ccTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGAt < 1:2422624/150‑1 (MQ=255) cTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGAtt > 1:3651848/1‑150 (MQ=255) tGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACACTTAGATTa > 1:1382656/1‑150 (MQ=255) gAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTAc < 2:4471384/150‑1 (MQ=255) gCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCaa < 1:4971860/150‑1 (MQ=255) tGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATa < 1:3028698/150‑1 (MQ=255) tGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATa > 1:100773/1‑150 (MQ=255) ggAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGt > 2:2509158/1‑150 (MQ=255) aTACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACt < 1:4922034/150‑1 (MQ=255) tACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACtt < 2:1014937/150‑1 (MQ=255) aCCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTg < 2:2186405/150‑1 (MQ=255) aCCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTg < 2:5278386/150‑1 (MQ=255) aCCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTg < 1:1089604/150‑1 (MQ=255) ccGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGc > 1:4801881/1‑150 (MQ=255) cGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCt > 2:618217/1‑150 (MQ=255) atgatCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATc < 1:2336041/150‑1 (MQ=255) gatCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCga < 1:1615583/150‑1 (MQ=255) gatCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCga < 2:2893525/150‑1 (MQ=255) gAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAAt > 2:3397894/1‑150 (MQ=255) gAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAAt > 2:2375519/1‑150 (MQ=255) aaaaaaCCGAAGCCGTCAGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAAt > 1:3237330/2‑150 (MQ=255) aaaCCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAg > 1:4269112/1‑150 (MQ=255) aCCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGa < 1:3611632/150‑1 (MQ=255) ccGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGaa < 2:3574297/150‑1 (MQ=255) ccGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGaa < 2:3573857/150‑1 (MQ=255) aaGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGAc < 1:4332324/150‑1 (MQ=255) cTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAAc < 1:5213439/92‑1 (MQ=255) cTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAAc > 2:5213439/1‑92 (MQ=255) | GGGTATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGG‑TTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGAC > NC_002947/4431902‑4432194 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |