| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,552,844 | T→C | 9.3% | S83P (TCT→CCT) ‡ | pydA → | NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,552,844 | 0 | T | C | 9.3% | 537.1 / 31.4 | 183 | S83P (TCT→CCT) ‡ | pydA | NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA |
| Reads supporting (aligned to +/- strand): ref base T (76/90); new base C (5/12); total (81/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.28e-01 | |||||||||||
Only 100 of 190 total aligned reads displayed.
CCTTCGAGGCCGGCTGGGGCGGCGTGGTCTGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGCCGATGGCATCGAG > NC_002947/4552698‑4552993 | ccTTCGAGGCCGGCTGGGGCGGCGTGGTCTGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGctctc < 2:1032714/150‑1 (MQ=255) cTTCGAGGCCGGCTGGGGCGGCGTGGTCTGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGctctct < 2:4956122/150‑1 (MQ=255) gAGGCCGGCTGGGGCGGCGTGGTCTGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGaa > 1:1074405/1‑150 (MQ=255) gAGGCCGGCTGGGGCGGCGTGGTCTGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGaa < 2:4542385/150‑1 (MQ=255) aGGCCGGCTGGGGCGGCGTGGTCTGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGata < 1:3658128/150‑3 (MQ=255) gCCGGCTGGGGCGGCGTGGTCTGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATc > 1:3359241/1‑150 (MQ=255) cTGGGGCGGCGTGGTCTGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCt < 1:2961151/150‑1 (MQ=255) ggcggcGTGGTCTGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGt < 1:1178819/150‑1 (MQ=255) ggcggcGTGGTCTGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGt < 1:751071/150‑1 (MQ=255) cTGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCa < 2:831006/150‑1 (MQ=255) cTGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCa < 2:3723894/150‑1 (MQ=255) tGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAg < 1:1884870/150‑1 (MQ=255) gAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGt > 1:3579270/1‑150 (MQ=255) gACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTgaa < 1:2564869/150‑1 (MQ=255) ccTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTgaagaa < 2:5354265/150‑1 (MQ=255) ccTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTgaagaa < 1:3710833/150‑1 (MQ=255) ccTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTgaagaa > 2:2896559/1‑150 (MQ=255) ggCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGAc < 1:982598/150‑1 (MQ=255) gAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAAc < 1:5215974/117‑1 (MQ=255) gAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTgg > 1:4062715/1‑150 (MQ=255) gAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTgg > 2:4116750/1‑150 (MQ=255) aaGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGc < 1:2901437/150‑1 (MQ=255) tGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGTGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACcg > 2:5212771/1‑150 (MQ=255) gTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTg > 2:2108947/1‑150 (MQ=255) gTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTg > 2:4845544/1‑150 (MQ=255) aaCGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATc < 2:4310323/150‑1 (MQ=255) aaCGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATc > 2:4826681/1‑150 (MQ=255) tgtCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCgtgt < 2:1732166/150‑1 (MQ=255) tcgtcgCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCg < 2:1431876/150‑1 (MQ=255) cgtcgCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGc < 2:3232166/150‑1 (MQ=255) gtcgCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGaa > 2:3157076/1‑100 (MQ=255) gtcgCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGaa < 1:3157076/100‑1 (MQ=255) tcgCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGc > 1:1013875/1‑94 (MQ=255) cTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTg < 1:2604656/103‑1 (MQ=255) cTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGcc > 1:381183/1‑150 (MQ=255) cTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGcc < 1:485005/150‑1 (MQ=255) cGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGt < 1:2082465/150‑1 (MQ=255) ggCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTg > 1:83884/1‑150 (MQ=255) cTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATaga < 2:3945429/150‑1 (MQ=255) tATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATagag > 1:4862212/1‑150 (MQ=255) tATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATagag < 2:5256139/150‑1 (MQ=255) ccccAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATc < 1:1774724/150‑1 (MQ=255) aaCCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTgg < 1:4088234/150‑1 (MQ=255) ccGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGaa < 1:1596841/150‑1 (MQ=255) ccGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGaa < 2:4219018/150‑1 (MQ=255) ccGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGaa < 1:1463946/150‑1 (MQ=255) ccGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGaa < 2:4218924/150‑1 (MQ=255) ccGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGCACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGaa < 2:3067076/150‑1 (MQ=255) cGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAg > 1:4927021/1‑150 (MQ=255) cAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTc < 2:5379538/150‑1 (MQ=255) aCAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCt > 1:350278/1‑150 (MQ=255) tggtctCAACAATATCGAGCTGATCACCGACCGGCCGCTCGAAGTGAACCTGCGCGAAATGAAAGAAGTGAAAATGCGCTGGCCCGACCGCGCACTGATCGCTTCGATCATGGTGCCATGCGAAGAAGAAGCGTGGAAAGCAATCCTGcc < 2:3780113/145‑1 (MQ=255) gggATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCg > 1:338798/1‑150 (MQ=255) aTCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCtg < 2:4797145/150‑1 (MQ=255) aTCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCtg < 2:4939755/150‑1 (MQ=255) aTCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCtg < 1:223006/150‑1 (MQ=255) aTCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCtg < 1:5400961/150‑1 (MQ=255) aTCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCtg < 2:5314896/150‑1 (MQ=255) aTCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCtg > 1:1787459/1‑150 (MQ=255) tCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCtgg < 1:1463068/150‑1 (MQ=255) caacaaTATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCtggt > 2:2601202/1‑150 (MQ=255) caacaaTATCGAGCTGATCACCGACCGGCCGCTCGAAGTGAACCTGCGCGAAATGAAAGAAGTGAAAATGCGCTGGCCCGACCGCGCACTGATCGCTTCGATCATGGTGCCATGCGAAGAAGAAGCGTGGAAAGCAATCCTGCCCCtggt < 1:372316/150‑1 (MQ=255) caacaaTATCGAGCTGATCACCGACCGGCCGCTCGAAGTGAACCTGCGCGAAATGAAAGAAGTGAAAATGCGCTGGCCCGACCGCGCACTGATCGCTTCGATCATGGTGCCATGCGAAGAAGAAGCGTGGAAAGCAATCCTGCCCCtggt < 1:4538041/150‑1 (MQ=255) caacaaTATCGAGCTGATCACCGACCGGCCGCTCGAAGTGAACCTGCGCGAAATGAAAGAAGTGAAAATGCGCTGGCCCGACCGCGCACTGATCGCTTCGATCATGGTGCCATGCGAAGAAGAAGCGTGGAAAGCAATCCTGCCCCtggt < 2:2477013/150‑1 (MQ=255) caacaaTATCGAGCTGATCACCGACCGGCCGCTCGAAGTGAACCTGCGCGAAATGAAAGAAGTGAAAATGCGCTGGCCCGACCGCGCACTGATCGCTTCGATCATGGTGCCATGCGAAGAAGAAGCGTGGAAAGCAATCCTGCCCCtggt < 1:3101817/150‑1 (MQ=255) aacaaTATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGTAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCtggtg > 2:1593466/1‑150 (MQ=255) acaaTATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCtggtgg > 1:1696462/1‑150 (MQ=255) acaaTATCGAGCTGATCACCGACCGGCCGCTCGAAGTGAACCTGCGCGAAATGAAAGAAGTGAAAATGCGCTGGCCCGACCGCGCACTGATCGCTTCGATCATGGTGCCATGCGAAGAAGAAGCGTGGAAAGCAATCCTGCCCCtggtgg > 1:3783834/1‑150 (MQ=255) caaTATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGa > 1:4253096/1‑150 (MQ=255) aaTATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGaa < 2:4886366/150‑1 (MQ=255) aaTATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGaa < 2:3345090/150‑1 (MQ=255) aaTATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGaa < 1:791928/150‑1 (MQ=255) tatCGAGCTGATCACCGACCGGCCGCTCGAAGTGAACCTGCGCGAAATGAAAGAAGTGAAAATGCGCTGGCCCGACCGCGCACTGATCGCTTCGATCATGGTGCCATGCGAAGAAGAAGCGTGGAAAGCAATCCTGCCCCTGGTGGAAga > 1:1060288/1‑149 (MQ=255) tatCGAGCTGATCACCGACCGGCCGCTCGAAGTGAACCTGCGCGAAATGAAAGAAGTGAAAATGCGCTGGCCCGACCGCGCACTGATCGCTTCGATCATGGTGCCATGCGAAGAAGAAGCGTGGAAAGCAATCCTGCCCCTGGTGGAAga < 2:4282461/150‑2 (MQ=255) tCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCa > 1:2385388/1‑150 (MQ=255) tCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCa > 2:3473710/1‑150 (MQ=255) tCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCa > 2:1195446/1‑150 (MQ=255) tCGAGCTGATCACCGACCGGCCGCTCGAAGTGAACCTGCGCGAAATGAAAGAAGTGAAAATGCGCTGGCCCGACCGCGCACTGATCGCTTCGATCATGGTGCCATGCGAAGAAGAAGCGTGGAAAGCAATCCTGCCCCTGGTGGAAgaaa < 1:713479/150‑4 (MQ=255) cGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCAc > 1:5385803/1‑150 (MQ=255) gAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACg > 2:4597525/1‑150 (MQ=255) aGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACgg < 1:1359411/150‑1 (MQ=255) ttGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACgggg < 2:2583942/150‑1 (MQ=255) tGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACggggg < 2:273320/150‑1 (MQ=255) gATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGc > 2:28724/1‑150 (MQ=255) aTCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGcc > 2:1653659/1‑150 (MQ=255) aTCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGcc < 2:5129264/150‑1 (MQ=255) aTCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGcc < 2:3315803/150‑1 (MQ=255) tCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGCCg > 1:2979342/1‑150 (MQ=255) accgaccgCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTc > 2:4713922/1‑117 (MQ=255) accgaccgCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTc < 1:4713922/117‑1 (MQ=255) accgaccgCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGCCGAt < 1:3415609/150‑1 (MQ=255) ccgaccgCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGCCGATg < 2:2304102/150‑1 (MQ=255) ccgaccgCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGCCGATg > 2:3283472/1‑150 (MQ=255) cgaccgGCCGCTCGAAGTGAACCTGCGCGAAATGAAAGAAGTGAAAATGCGCTGGCCCGACCGCGCACTGATCGCTTCGATCATGGTGCCATGCgaagaagaagc > 1:1571847/1‑103 (MQ=255) cgaccgGCCGCTCGAAGTGAACCTGCGCGAAATGAAAGAAGTGAAAATGCGCTGGCCCGACCGCGCACTGATCGCTTCGATCATGGTGCCATGCgaagaagaagc < 2:1571847/105‑3 (MQ=255) accgCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGCCGATGGCa < 1:5055433/150‑1 (MQ=255) accgCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGCCGATGGCa < 1:4708474/150‑1 (MQ=255) cgCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGCCGATGGCATc > 1:705228/1‑150 (MQ=255) cgCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGCCGATGGCATc > 1:545254/1‑150 (MQ=255) tctctGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGCCGATGGCATCGAg < 1:2645188/150‑1 (MQ=255) | CCTTCGAGGCCGGCTGGGGCGGCGTGGTCTGGAAGACCCTGGGCGAAGACCCTGCGGCGGTCAACGTGTCGTCGCGCTACTCGGCGCACTATGGCCCCAACCGTCAGGTACAGGGGATCAACAATATCGAGTTGATCACCGACCGCTCTCTGGAAATCAACCTGCGTGAAATCACCCAGGTGAAGAAGGACTGGCCCGACCGCGCACTGATCGTGTCGCTGATGGTGCCGTGCATAGAGGAATCGTGGAAGTTCATCCTGCCGCTGGTGGAAGCCACGGGGGCCGATGGCATCGAG > NC_002947/4552698‑4552993 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |